RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 ZNF214Q9UL59 606 aaPredicted RBP12.55□□□□□ -0.4
SPTLC2-205ENST00000556607 STX8Q9UNK0 236 aa12.55□□□□□ -0.4
SPTLC2-205ENST00000556607 SALL3Q9BXA9 1300 aa12.55□□□□□ -0.4
SPTLC2-205ENST00000556607 TMEM232C9JQI7 657 aa12.54□□□□□ -0.4
SPTLC2-205ENST00000556607 DNM1LO00429 736 aa12.54□□□□□ -0.4
SPTLC2-205ENST00000556607 COL6A1P12109 1028 aa12.54□□□□□ -0.4
SPTLC2-205ENST00000556607 SLC1A4P43007 532 aa12.54□□□□□ -0.4
SPTLC2-205ENST00000556607 AAMPQ13685 434 aa12.54□□□□□ -0.4
SPTLC2-205ENST00000556607 MCMDC2Q4G0Z9 681 aa12.54□□□□□ -0.4
SPTLC2-205ENST00000556607 RRP12Q5JTH9 1297 aaKnown RBP12.54□□□□□ -0.4
SPTLC2-205ENST00000556607 PPP4R3BQ5MIZ7 849 aa12.54□□□□□ -0.4
SPTLC2-205ENST00000556607 VPS53Q5VIR6 699 aa12.54□□□□□ -0.4
SPTLC2-205ENST00000556607 MKL1Q969V6 931 aa12.54□□□□□ -0.4
SPTLC2-205ENST00000556607 UBE2OQ9C0C9 1292 aaKnown RBP12.54□□□□□ -0.4
SPTLC2-205ENST00000556607 INCENPQ9NQS7 918 aa12.54□□□□□ -0.4
SPTLC2-205ENST00000556607 PRKAG2Q9UGJ0 569 aa12.54□□□□□ -0.4
SPTLC2-205ENST00000556607 CNPY2Q9Y2B0 182 aa12.54□□□□□ -0.4
SPTLC2-205ENST00000556607 MCCP23508 829 aa12.53□□□□□ -0.4
SPTLC2-205ENST00000556607 MAGEA10P43363 369 aaPredicted RBP12.53□□□□□ -0.4
SPTLC2-205ENST00000556607 MDM2Q00987 491 aaPredicted RBP12.53□□□□□ -0.4
SPTLC2-205ENST00000556607 ZNF792Q3KQV3 632 aa12.53□□□□□ -0.4
SPTLC2-205ENST00000556607 ANKRD35Q8N283 1001 aa12.53□□□□□ -0.4
SPTLC2-205ENST00000556607 GMCL1P1Q8NEA9 526 aa12.53□□□□□ -0.4
SPTLC2-205ENST00000556607 REPS2Q8NFH8 660 aa12.53□□□□□ -0.4
SPTLC2-205ENST00000556607 FAM227BQ96M60 508 aa12.53□□□□□ -0.4
SPTLC2-205ENST00000556607 TINF2Q9BSI4 451 aa12.53□□□□□ -0.4
SPTLC2-205ENST00000556607 HOMER2Q9NSB8 354 aa12.53□□□□□ -0.4
SPTLC2-205ENST00000556607 ATP11BQ9Y2G3 1177 aa12.53□□□□□ -0.4
SPTLC2-205ENST00000556607 DIS3Q9Y2L1 958 aaKnown RBP12.53□□□□□ -0.4
SPTLC2-205ENST00000556607 RIPK3Q9Y572 518 aa12.53□□□□□ -0.4
SPTLC2-205ENST00000556607 SMCHD1A6NHR9 2005 aa12.52□□□□□ -0.4
SPTLC2-205ENST00000556607 A0A0D9SFI3 127 aa12.52□□□□□ -0.41
SPTLC2-205ENST00000556607 A0A1W2PPC1 479 aa12.52□□□□□ -0.41
SPTLC2-205ENST00000556607 NMT2O60551 498 aa12.52□□□□□ -0.41
SPTLC2-205ENST00000556607 RARBP10826 455 aa12.52□□□□□ -0.41
SPTLC2-205ENST00000556607 STAT2P52630 851 aa12.52□□□□□ -0.41
SPTLC2-205ENST00000556607 NMIQ13287 307 aaPredicted RBP12.52□□□□□ -0.41
SPTLC2-205ENST00000556607 EXOC6Q8TAG9 804 aa12.52□□□□□ -0.41
SPTLC2-205ENST00000556607 CHURC1Q8WUH1 139 aa12.52□□□□□ -0.41
SPTLC2-205ENST00000556607 FERMT2Q96AC1 680 aa12.52□□□□□ -0.41
SPTLC2-205ENST00000556607 GDF15Q99988 308 aa12.52□□□□□ -0.41
SPTLC2-205ENST00000556607 LBHD1Q9BQE6 289 aaPredicted RBP12.52□□□□□ -0.41
SPTLC2-205ENST00000556607 PRO3102Q9H379 93 aa12.52□□□□□ -0.41
SPTLC2-205ENST00000556607 XPNPEP3Q9NQH7 507 aa12.52□□□□□ -0.41
SPTLC2-205ENST00000556607 SYNPO2Q9UMS6 1093 aa12.52□□□□□ -0.41
SPTLC2-205ENST00000556607 PLIN4Q96Q06 1357 aa12.52□□□□□ -0.41
SPTLC2-205ENST00000556607 BMP8BP34820 402 aa12.51□□□□□ -0.41
SPTLC2-205ENST00000556607 ADCYAP1R1P41586 468 aa12.51□□□□□ -0.41
SPTLC2-205ENST00000556607 RTP1P59025 263 aa12.51□□□□□ -0.41
SPTLC2-205ENST00000556607 HAND2P61296 217 aa12.51□□□□□ -0.41
SPTLC2-205ENST00000556607 LRRC41Q15345 812 aa12.51□□□□□ -0.41
SPTLC2-205ENST00000556607 CCDC96Q2M329 555 aa12.51□□□□□ -0.41
SPTLC2-205ENST00000556607 SLC39A5Q6ZMH5 540 aa12.51□□□□□ -0.41
SPTLC2-205ENST00000556607 KCTD1Q719H9 257 aa12.51□□□□□ -0.41
SPTLC2-205ENST00000556607 FAM160B2Q86V87 743 aa12.51□□□□□ -0.41
SPTLC2-205ENST00000556607 CHD1LQ86WJ1 897 aa12.51□□□□□ -0.41
SPTLC2-205ENST00000556607 SLC38A10Q9HBR0 1119 aa12.51□□□□□ -0.41
SPTLC2-205ENST00000556607 PRDM5Q9NQX1 630 aaPredicted RBP12.51□□□□□ -0.41
SPTLC2-205ENST00000556607 FBXO40Q9UH90 709 aa12.51□□□□□ -0.41
SPTLC2-205ENST00000556607 ZHX1Q9UKY1 873 aaPredicted RBP12.51□□□□□ -0.41
SPTLC2-205ENST00000556607 FOXP2O15409 715 aa12.5□□□□□ -0.41
SPTLC2-205ENST00000556607 PGK1P00558 417 aa12.5□□□□□ -0.41
SPTLC2-205ENST00000556607 IGHA2P01877 340 aa12.5□□□□□ -0.41
SPTLC2-205ENST00000556607 IGHDP01880 384 aa12.5□□□□□ -0.41
SPTLC2-205ENST00000556607 FGAP02671 866 aa12.5□□□□□ -0.41
SPTLC2-205ENST00000556607 FDX1P10109 184 aa12.5□□□□□ -0.41
SPTLC2-205ENST00000556607 HSPD1P10809 573 aaKnown RBP12.5□□□□□ -0.41
SPTLC2-205ENST00000556607 AKR1A1P14550 325 aa12.5□□□□□ -0.41
SPTLC2-205ENST00000556607 TAL1P17542 331 aaPredicted RBP12.5□□□□□ -0.41
SPTLC2-205ENST00000556607 MFAP1P55081 439 aaKnown RBP12.5□□□□□ -0.41
SPTLC2-205ENST00000556607 SNAP25P60880 206 aa12.5□□□□□ -0.41
SPTLC2-205ENST00000556607 CCDC174Q6PII3 467 aa12.5□□□□□ -0.41
SPTLC2-205ENST00000556607 RNF180Q86T96 592 aa12.5□□□□□ -0.41
SPTLC2-205ENST00000556607 CHST13Q8NET6 341 aa12.5□□□□□ -0.41
SPTLC2-205ENST00000556607 STAG1Q8WVM7 1258 aa12.5□□□□□ -0.41
SPTLC2-205ENST00000556607 LRCH3Q96II8 777 aa12.5□□□□□ -0.41
SPTLC2-205ENST00000556607 NRBP1Q9UHY1 535 aa12.5□□□□□ -0.41
SPTLC2-205ENST00000556607 ANAPC4Q9UJX5 808 aa12.5□□□□□ -0.41
SPTLC2-205ENST00000556607 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.5□□□□□ -0.41
SPTLC2-205ENST00000556607 CCDC171Q6TFL3 1326 aa12.49□□□□□ -0.41
SPTLC2-205ENST00000556607 ATP2A1O14983 1001 aa12.49□□□□□ -0.41
SPTLC2-205ENST00000556607 ALAS1P13196 640 aa12.49□□□□□ -0.41
SPTLC2-205ENST00000556607 SDSP20132 328 aa12.49□□□□□ -0.41
SPTLC2-205ENST00000556607 OAZ1P54368 228 aa12.49□□□□□ -0.41
SPTLC2-205ENST00000556607 ALX1Q15699 326 aa12.49□□□□□ -0.41
SPTLC2-205ENST00000556607 RCSD1Q6JBY9 416 aa12.49□□□□□ -0.41
SPTLC2-205ENST00000556607 ZNF589Q86UQ0 364 aaPredicted RBP12.49□□□□□ -0.41
SPTLC2-205ENST00000556607 SMC5Q8IY18 1101 aa12.49□□□□□ -0.41
SPTLC2-205ENST00000556607 TDHQ8IZJ6 230 aa12.49□□□□□ -0.41
SPTLC2-205ENST00000556607 GMCL1Q96IK5 515 aa12.49□□□□□ -0.41
SPTLC2-205ENST00000556607 AGBL1Q96MI9 1066 aa12.49□□□□□ -0.41
SPTLC2-205ENST00000556607 ACAD9Q9H845 621 aa12.49□□□□□ -0.41
SPTLC2-205ENST00000556607 IL17RBQ9NRM6 502 aa12.49□□□□□ -0.41
SPTLC2-205ENST00000556607 DIAPH3Q9NSV4 1193 aa12.49□□□□□ -0.41
SPTLC2-205ENST00000556607 FAM184BQ9ULE4 1060 aa12.49□□□□□ -0.41
SPTLC2-205ENST00000556607 SUPT16HQ9Y5B9 1047 aaKnown RBP12.49□□□□□ -0.41
SPTLC2-205ENST00000556607 MCM3APO60318 1980 aa12.49□□□□□ -0.41
SPTLC2-205ENST00000556607 SOX1O00570 391 aaPredicted RBP12.48□□□□□ -0.41
SPTLC2-205ENST00000556607 ORC4O43929 436 aa12.48□□□□□ -0.41
SPTLC2-205ENST00000556607 ZNF865P0CJ78 1059 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms