RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 ADD1P35611 737 aaKnown RBP20.28■□□□□ 0.84
TUBB3-211ENST00000556536 TM4SF4P48230 202 aa20.28■□□□□ 0.84
TUBB3-211ENST00000556536 INHBEP58166 350 aa20.28■□□□□ 0.84
TUBB3-211ENST00000556536 SLC35G1Q2M3R5 365 aa20.28■□□□□ 0.84
TUBB3-211ENST00000556536 GPATCH4Q5T3I0 446 aaKnown RBP20.28■□□□□ 0.84
TUBB3-211ENST00000556536 IFNL1Q8IU54 200 aa20.28■□□□□ 0.84
TUBB3-211ENST00000556536 CMTR1Q8N1G2 835 aaKnown RBP20.28■□□□□ 0.84
TUBB3-211ENST00000556536 NECAB1Q8N987 351 aa20.28■□□□□ 0.84
TUBB3-211ENST00000556536 NID2Q14112 1375 aa20.28■□□□□ 0.84
TUBB3-211ENST00000556536 LOC285556D6RIA3 1793 aa20.28■□□□□ 0.84
TUBB3-211ENST00000556536 KLRF2D3W0D1 207 aa20.27■□□□□ 0.84
TUBB3-211ENST00000556536 FLOT1O75955 427 aa20.27■□□□□ 0.84
TUBB3-211ENST00000556536 KIF5BP33176 963 aa20.27■□□□□ 0.84
TUBB3-211ENST00000556536 ST3GAL1Q11201 340 aa20.27■□□□□ 0.84
TUBB3-211ENST00000556536 SCRN1Q12765 414 aa20.27■□□□□ 0.84
TUBB3-211ENST00000556536 SAMD1Q6SPF0 538 aaPredicted RBP20.27■□□□□ 0.84
TUBB3-211ENST00000556536 NBPF11Q86T75 865 aa20.27■□□□□ 0.84
TUBB3-211ENST00000556536 ASCC2Q9H1I8 757 aaPredicted RBP20.27■□□□□ 0.84
TUBB3-211ENST00000556536 FEM1BQ9UK73 627 aa20.27■□□□□ 0.84
TUBB3-211ENST00000556536 PTPRFP10586 1907 aa20.27■□□□□ 0.84
TUBB3-211ENST00000556536 MCM2P49736 904 aa20.26■□□□□ 0.83
TUBB3-211ENST00000556536 STAT2P52630 851 aa20.26■□□□□ 0.83
TUBB3-211ENST00000556536 IKQ13123 557 aaPredicted RBP20.26■□□□□ 0.83
TUBB3-211ENST00000556536 PABPC4Q13310 644 aaKnown RBP eCLIP20.26■□□□□ 0.83
TUBB3-211ENST00000556536 BTNL9Q6UXG8 535 aa20.26■□□□□ 0.83
TUBB3-211ENST00000556536 TMTC3Q6ZXV5 915 aa20.26■□□□□ 0.83
TUBB3-211ENST00000556536 SRBD1Q8N5C6 995 aaKnown RBP20.26■□□□□ 0.83
TUBB3-211ENST00000556536 KIFC2Q96AC6 838 aa20.26■□□□□ 0.83
TUBB3-211ENST00000556536 P2RX7Q99572 595 aaKnown RBP20.26■□□□□ 0.83
TUBB3-211ENST00000556536 SLKQ9H2G2 1235 aaPredicted RBP20.26■□□□□ 0.83
TUBB3-211ENST00000556536 TSHZ2Q9NRE2 1034 aa20.26■□□□□ 0.83
TUBB3-211ENST00000556536 SLC45A1Q9Y2W3 748 aa20.26■□□□□ 0.83
TUBB3-211ENST00000556536 PLA2G6O60733 806 aa20.25■□□□□ 0.83
TUBB3-211ENST00000556536 CYP2C8P10632 490 aa20.25■□□□□ 0.83
TUBB3-211ENST00000556536 OSBPP22059 807 aa20.25■□□□□ 0.83
TUBB3-211ENST00000556536 IRX3P78415 501 aaPredicted RBP20.25■□□□□ 0.83
TUBB3-211ENST00000556536 COG2Q14746 738 aa20.25■□□□□ 0.83
TUBB3-211ENST00000556536 SYDE2Q5VT97 1194 aa20.25■□□□□ 0.83
TUBB3-211ENST00000556536 FAM160B2Q86V87 743 aa20.25■□□□□ 0.83
TUBB3-211ENST00000556536 CHURC1Q8WUH1 139 aa20.25■□□□□ 0.83
TUBB3-211ENST00000556536 GTF3C6Q969F1 213 aa20.25■□□□□ 0.83
TUBB3-211ENST00000556536 SNX21Q969T3 373 aa20.25■□□□□ 0.83
TUBB3-211ENST00000556536 TMX3Q96JJ7 454 aa20.25■□□□□ 0.83
TUBB3-211ENST00000556536 ZSCAN31Q96LW9 406 aaPredicted RBP20.25■□□□□ 0.83
TUBB3-211ENST00000556536 SLF1Q9BQI6 1058 aa20.25■□□□□ 0.83
TUBB3-211ENST00000556536 RBM28Q9NW13 759 aaKnown RBP20.25■□□□□ 0.83
TUBB3-211ENST00000556536 PPP1R9AQ9ULJ8 1098 aa20.25■□□□□ 0.83
TUBB3-211ENST00000556536 PRR12Q9ULL5 1215 aa20.25■□□□□ 0.83
TUBB3-211ENST00000556536 SPDYE16A6NNV3 312 aaPredicted RBP20.24■□□□□ 0.83
TUBB3-211ENST00000556536 CYTH3O43739 400 aa20.24■□□□□ 0.83
TUBB3-211ENST00000556536 DTNBO60941 627 aa20.24■□□□□ 0.83
TUBB3-211ENST00000556536 DSG3P32926 999 aa20.24■□□□□ 0.83
TUBB3-211ENST00000556536 GNAQP50148 359 aa20.24■□□□□ 0.83
TUBB3-211ENST00000556536 SOX10P56693 466 aa20.24■□□□□ 0.83
TUBB3-211ENST00000556536 SNAP25P60880 206 aa20.24■□□□□ 0.83
TUBB3-211ENST00000556536 FUT2Q10981 343 aa20.24■□□□□ 0.83
TUBB3-211ENST00000556536 POTEEQ6S8J3 1075 aa20.24■□□□□ 0.83
TUBB3-211ENST00000556536 ADGRF4Q8IZF3 695 aa20.24■□□□□ 0.83
TUBB3-211ENST00000556536 CCDC82Q8N4S0 544 aa20.24■□□□□ 0.83
TUBB3-211ENST00000556536 ATG4CQ96DT6 458 aa20.24■□□□□ 0.83
TUBB3-211ENST00000556536 VAT1LQ9HCJ6 419 aa20.24■□□□□ 0.83
TUBB3-211ENST00000556536 RNF186Q9NXI6 227 aa20.24■□□□□ 0.83
TUBB3-211ENST00000556536 CCDC196A0A1B0GTZ2 297 aa20.23■□□□□ 0.83
TUBB3-211ENST00000556536 TRPA1O75762 1119 aa20.23■□□□□ 0.83
TUBB3-211ENST00000556536 HERVK_113P62684 666 aa20.23■□□□□ 0.83
TUBB3-211ENST00000556536 PPP2R5BQ15173 497 aa20.23■□□□□ 0.83
TUBB3-211ENST00000556536 NTRK3Q16288 839 aa20.23■□□□□ 0.83
TUBB3-211ENST00000556536 CCDC83Q8IWF9 413 aa20.23■□□□□ 0.83
TUBB3-211ENST00000556536 REM2Q8IYK8 340 aaPredicted RBP20.23■□□□□ 0.83
TUBB3-211ENST00000556536 PRPF38AQ8NAV1 312 aaKnown RBP20.23■□□□□ 0.83
TUBB3-211ENST00000556536 LZTS2Q9BRK4 669 aa20.23■□□□□ 0.83
TUBB3-211ENST00000556536 JMJD4Q9H9V9 463 aa20.23■□□□□ 0.83
TUBB3-211ENST00000556536 SH2B1Q9NRF2 756 aaPredicted RBP20.23■□□□□ 0.83
TUBB3-211ENST00000556536 PNMA3Q9UL41 463 aa20.23■□□□□ 0.83
TUBB3-211ENST00000556536 PEX10O60683 326 aa20.22■□□□□ 0.83
TUBB3-211ENST00000556536 PPFIA3O75145 1194 aa20.22■□□□□ 0.83
TUBB3-211ENST00000556536 CTDNEP1O95476 244 aa20.22■□□□□ 0.83
TUBB3-211ENST00000556536 OTUD7BQ6GQQ9 843 aa20.22■□□□□ 0.83
TUBB3-211ENST00000556536 SPZ1Q9BXG8 430 aa20.22■□□□□ 0.83
TUBB3-211ENST00000556536 RIOX1Q9H6W3 641 aa20.22■□□□□ 0.83
TUBB3-211ENST00000556536 ZCCHC17Q9NP64 241 aaKnown RBP20.22■□□□□ 0.83
TUBB3-211ENST00000556536 HOXC10Q9NYD6 342 aa20.22■□□□□ 0.83
TUBB3-211ENST00000556536 MYPNQ86TC9 1320 aa20.22■□□□□ 0.83
TUBB3-211ENST00000556536 PDE4DIPQ5VU43 2346 aa20.21■□□□□ 0.83
TUBB3-211ENST00000556536 DHX16O60231 1041 aaKnown RBP20.21■□□□□ 0.83
TUBB3-211ENST00000556536 TAF1CQ15572 869 aaPredicted RBP20.21■□□□□ 0.83
TUBB3-211ENST00000556536 PIBF1Q8WXW3 757 aa20.21■□□□□ 0.83
TUBB3-211ENST00000556536 PHKBQ93100 1093 aa20.21■□□□□ 0.83
TUBB3-211ENST00000556536 PARK7Q99497 189 aaKnown RBP20.21■□□□□ 0.83
TUBB3-211ENST00000556536 ADAMTS5Q9UNA0 930 aa20.21■□□□□ 0.83
TUBB3-211ENST00000556536 CNTNAP5Q8WYK1 1306 aa20.21■□□□□ 0.83
TUBB3-211ENST00000556536 hCG_1642624A0A1W2PR95 340 aa20.2■□□□□ 0.82
TUBB3-211ENST00000556536 K7ELQ4 463 aaPredicted RBP20.2■□□□□ 0.82
TUBB3-211ENST00000556536 VWA5AO00534 786 aa20.2■□□□□ 0.82
TUBB3-211ENST00000556536 IFNAR1P17181 557 aa20.2■□□□□ 0.82
TUBB3-211ENST00000556536 SMARCA1P28370 1054 aa20.2■□□□□ 0.82
TUBB3-211ENST00000556536 PRPF38BQ5VTL8 546 aaKnown RBP20.2■□□□□ 0.82
TUBB3-211ENST00000556536 LBX2Q6XYB7 198 aa20.2■□□□□ 0.82
TUBB3-211ENST00000556536 CTU1Q7Z7A3 348 aaKnown RBP20.2■□□□□ 0.82
TUBB3-211ENST00000556536 HSCBQ8IWL3 235 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms