RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 PSMB7Q99436 277 aa16.66■□□□□ 0.26
NEK9-209ENST00000556170 FAM196BA6NMK8 535 aa16.65■□□□□ 0.26
NEK9-209ENST00000556170 ERCC5P28715 1186 aaPredicted RBP16.65■□□□□ 0.26
NEK9-209ENST00000556170 CALCRLQ16602 461 aa16.65■□□□□ 0.26
NEK9-209ENST00000556170 USH1GQ495M9 461 aa16.65■□□□□ 0.26
NEK9-209ENST00000556170 FCHSD1Q86WN1 690 aa16.65■□□□□ 0.26
NEK9-209ENST00000556170 CCDC42Q96M95 316 aa16.65■□□□□ 0.26
NEK9-209ENST00000556170 FAM207AQ9NSI2 230 aaPredicted RBP16.65■□□□□ 0.26
NEK9-209ENST00000556170 TMOD2Q9NZR1 351 aa16.65■□□□□ 0.26
NEK9-209ENST00000556170 OGFRQ9NZT2 677 aa16.65■□□□□ 0.26
NEK9-209ENST00000556170 KRT25Q7Z3Z0 450 aa16.65■□□□□ 0.26
NEK9-209ENST00000556170 CD209Q9NNX6 404 aa16.65■□□□□ 0.26
NEK9-209ENST00000556170 SEPT11Q9NVA2 429 aaKnown RBP16.65■□□□□ 0.26
NEK9-209ENST00000556170 ZYXQ15942 572 aaKnown RBP16.65■□□□□ 0.26
NEK9-209ENST00000556170 NELFCDQ8IXH7 590 aa16.65■□□□□ 0.26
NEK9-209ENST00000556170 ACRBPQ8NEB7 543 aa16.65■□□□□ 0.26
NEK9-209ENST00000556170 TBCKQ8TEA7 893 aa16.65■□□□□ 0.26
NEK9-209ENST00000556170 SPATA31A5Q5VU36 1347 aa16.65■□□□□ 0.26
NEK9-209ENST00000556170 SPATA31A7Q8IWB4 1347 aa16.65■□□□□ 0.26
NEK9-209ENST00000556170 JCADQ9P266 1359 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 CTAGE15A4D2H0 777 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 STX10O60499 249 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 CTAGE8P0CG41 777 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 GTF2F1P35269 517 aaKnown RBP eCLIP16.64■□□□□ 0.25
NEK9-209ENST00000556170 PFKFB3Q16875 520 aaPredicted RBP16.64■□□□□ 0.25
NEK9-209ENST00000556170 FBXO33Q7Z6M2 555 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 NBPF11Q86T75 865 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 CTAGE6Q86UF2 777 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 CTAGE4Q8IX94 777 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 TRAF5O00463 557 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 OR52Z1P0C646 297 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 NCAPHQ15003 741 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 KCTD1Q719H9 257 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 NEK8Q86SG6 692 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 ZNF710Q8N1W2 664 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 GOLGA1Q92805 767 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 BPIFA3Q9BQP9 254 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 DBNDD1Q9H9R9 158 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 SLC1A4P43007 532 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 ADCY7P51828 1080 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 FAM114A1Q8IWE2 563 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 FEZ1Q99689 392 aa16.64■□□□□ 0.25
NEK9-209ENST00000556170 ATP2B4P23634 1241 aa16.63■□□□□ 0.25
NEK9-209ENST00000556170 SEPT12Q8IYM1 358 aa16.63■□□□□ 0.25
NEK9-209ENST00000556170 FBXL16Q8N461 479 aa16.63■□□□□ 0.25
NEK9-209ENST00000556170 PHF20Q9BVI0 1012 aa16.63■□□□□ 0.25
NEK9-209ENST00000556170 COPB1P53618 953 aaKnown RBP16.63■□□□□ 0.25
NEK9-209ENST00000556170 RASGRP2Q7LDG7 609 aa16.63■□□□□ 0.25
NEK9-209ENST00000556170 DGKHQ86XP1 1220 aa16.63■□□□□ 0.25
NEK9-209ENST00000556170 HPSEQ9Y251 543 aa16.63■□□□□ 0.25
NEK9-209ENST00000556170 RGPD5Q99666 1765 aa16.63■□□□□ 0.25
NEK9-209ENST00000556170 CYLC1P35663 651 aaPredicted RBP16.63■□□□□ 0.25
NEK9-209ENST00000556170 GPSM2P81274 684 aa16.63■□□□□ 0.25
NEK9-209ENST00000556170 SEC23AQ15436 765 aa16.63■□□□□ 0.25
NEK9-209ENST00000556170 FBXO38Q6PIJ6 1188 aa16.63■□□□□ 0.25
NEK9-209ENST00000556170 TACC3Q9Y6A5 838 aa16.63■□□□□ 0.25
NEK9-209ENST00000556170 LRRC37A3O60309 1634 aa16.63■□□□□ 0.25
NEK9-209ENST00000556170 MRPL12P52815 198 aaKnown RBP16.62■□□□□ 0.25
NEK9-209ENST00000556170 IRX3P78415 501 aaPredicted RBP16.62■□□□□ 0.25
NEK9-209ENST00000556170 C12orf60Q5U649 245 aa16.62■□□□□ 0.25
NEK9-209ENST00000556170 CEP95Q96GE4 821 aa16.62■□□□□ 0.25
NEK9-209ENST00000556170 ZFP91Q96JP5 570 aaPredicted RBP16.62■□□□□ 0.25
NEK9-209ENST00000556170 LONP1P36776 959 aaKnown RBP16.62■□□□□ 0.25
NEK9-209ENST00000556170 LRRC41Q15345 812 aa16.62■□□□□ 0.25
NEK9-209ENST00000556170 RUFY1Q96T51 708 aa16.62■□□□□ 0.25
NEK9-209ENST00000556170 TNS2Q63HR2 1409 aa16.62■□□□□ 0.25
NEK9-209ENST00000556170 USP17L5A8MUK1 530 aa16.62■□□□□ 0.25
NEK9-209ENST00000556170 USO1O60763 962 aaKnown RBP16.62■□□□□ 0.25
NEK9-209ENST00000556170 SEC31AO94979 1220 aaKnown RBP16.62■□□□□ 0.25
NEK9-209ENST00000556170 KRT31Q15323 416 aa16.62■□□□□ 0.25
NEK9-209ENST00000556170 ZNF579Q8NAF0 562 aaKnown RBP16.62■□□□□ 0.25
NEK9-209ENST00000556170 GDAP1L1Q96MZ0 367 aa16.62■□□□□ 0.25
NEK9-209ENST00000556170 VEZTQ9HBM0 779 aa16.62■□□□□ 0.25
NEK9-209ENST00000556170 PARP3Q9Y6F1 533 aa16.62■□□□□ 0.25
NEK9-209ENST00000556170 B4DLN1 442 aa16.62■□□□□ 0.25
NEK9-209ENST00000556170 TUBB4AP04350 444 aa16.62■□□□□ 0.25
NEK9-209ENST00000556170 CHMP4BP1P59074 171 aa16.62■□□□□ 0.25
NEK9-209ENST00000556170 UBE2SQ16763 222 aa16.62■□□□□ 0.25
NEK9-209ENST00000556170 CYP26C1Q6V0L0 522 aa16.62■□□□□ 0.25
NEK9-209ENST00000556170 TBC1D22AQ8WUA7 517 aa16.62■□□□□ 0.25
NEK9-209ENST00000556170 ACBD3Q9H3P7 528 aa16.62■□□□□ 0.25
NEK9-209ENST00000556170 BICDL2A1A5D9 508 aa16.61■□□□□ 0.25
NEK9-209ENST00000556170 ENC1O14682 589 aa16.61■□□□□ 0.25
NEK9-209ENST00000556170 PLCG1P19174 1290 aa16.61■□□□□ 0.25
NEK9-209ENST00000556170 CACNB1Q02641 598 aaPredicted RBP16.61■□□□□ 0.25
NEK9-209ENST00000556170 AEBP2Q6ZN18 517 aaPredicted RBP16.61■□□□□ 0.25
NEK9-209ENST00000556170 TMEM260Q9NX78 707 aa16.61■□□□□ 0.25
NEK9-209ENST00000556170 FGFR1OPO95684 399 aaKnown RBP16.61■□□□□ 0.25
NEK9-209ENST00000556170 TRAPPC10P48553 1259 aa16.61■□□□□ 0.25
NEK9-209ENST00000556170 KIF5AQ12840 1032 aa16.61■□□□□ 0.25
NEK9-209ENST00000556170 TMTC1Q8IUR5 882 aa16.61■□□□□ 0.25
NEK9-209ENST00000556170 MXD3Q9BW11 206 aa16.61■□□□□ 0.25
NEK9-209ENST00000556170 NLRC4Q9NPP4 1024 aa16.61■□□□□ 0.25
NEK9-209ENST00000556170 DMTNQ08495 405 aa16.61■□□□□ 0.25
NEK9-209ENST00000556170 HPS3Q969F9 1004 aa16.61■□□□□ 0.25
NEK9-209ENST00000556170 CRACR2AQ9BSW2 395 aa16.61■□□□□ 0.25
NEK9-209ENST00000556170 PKD2L1Q9P0L9 805 aa16.61■□□□□ 0.25
NEK9-209ENST00000556170 MRC1P22897 1456 aa16.6■□□□□ 0.25
NEK9-209ENST00000556170 PRCPP42785 496 aa16.6■□□□□ 0.25
NEK9-209ENST00000556170 PKN1Q16512 942 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms