RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 PHF12Q96QT6 1004 aa10.1□□□□□ -0.79
PSEN1-215ENST00000556011 NOC4LQ9BVI4 516 aaKnown RBP10.1□□□□□ -0.79
PSEN1-215ENST00000556011 CWC22Q9HCG8 908 aaKnown RBP10.1□□□□□ -0.79
PSEN1-215ENST00000556011 SPINK5Q9NQ38 1064 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-215ENST00000556011 KIF16BQ96L93 1317 aa10.09□□□□□ -0.79
PSEN1-215ENST00000556011 CSMD1Q96PZ7 3565 aa10.09□□□□□ -0.79
PSEN1-215ENST00000556011 ARVCFO00192 962 aa10.09□□□□□ -0.79
PSEN1-215ENST00000556011 SPTLC1O15269 473 aa10.09□□□□□ -0.79
PSEN1-215ENST00000556011 EFCAB14O75071 495 aa10.09□□□□□ -0.79
PSEN1-215ENST00000556011 CAPNS1P04632 268 aa10.09□□□□□ -0.79
PSEN1-215ENST00000556011 HOXC6P09630 235 aa10.09□□□□□ -0.79
PSEN1-215ENST00000556011 RARBP10826 455 aa10.09□□□□□ -0.79
PSEN1-215ENST00000556011 ACTN1P12814 892 aa10.09□□□□□ -0.79
PSEN1-215ENST00000556011 KLRK1P26718 216 aa10.09□□□□□ -0.79
PSEN1-215ENST00000556011 NEUROD2Q15784 382 aa10.09□□□□□ -0.79
PSEN1-215ENST00000556011 PUS7Q96PZ0 661 aaKnown RBP10.09□□□□□ -0.79
PSEN1-215ENST00000556011 GMEB2Q9UKD1 530 aa10.09□□□□□ -0.79
PSEN1-215ENST00000556011 ATXN7O15265 892 aaPredicted RBP10.08□□□□□ -0.8
PSEN1-215ENST00000556011 NDUFV1P49821 464 aa10.08□□□□□ -0.8
PSEN1-215ENST00000556011 PRR23CQ6ZRP0 262 aa10.08□□□□□ -0.8
PSEN1-215ENST00000556011 CCDC84Q86UT8 332 aaPredicted RBP10.08□□□□□ -0.8
PSEN1-215ENST00000556011 CRELD1Q96HD1 420 aa10.08□□□□□ -0.8
PSEN1-215ENST00000556011 TSEN34Q9BSV6 310 aaKnown RBP10.08□□□□□ -0.8
PSEN1-215ENST00000556011 PICK1Q9NRD5 415 aa10.08□□□□□ -0.8
PSEN1-215ENST00000556011 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.08□□□□□ -0.8
PSEN1-215ENST00000556011 RBPJLQ9UBG7 517 aa10.08□□□□□ -0.8
PSEN1-215ENST00000556011 F8P00451 2351 aa10.07□□□□□ -0.8
PSEN1-215ENST00000556011 IRS4O14654 1257 aaPredicted RBP10.07□□□□□ -0.8
PSEN1-215ENST00000556011 PFKMP08237 780 aa10.07□□□□□ -0.8
PSEN1-215ENST00000556011 ERVK-9P63128 1117 aa10.07□□□□□ -0.8
PSEN1-215ENST00000556011 ERVK-24P63145 666 aa10.07□□□□□ -0.8
PSEN1-215ENST00000556011 ADAM15Q13444 863 aa10.07□□□□□ -0.8
PSEN1-215ENST00000556011 VTI1AQ96AJ9 217 aa10.07□□□□□ -0.8
PSEN1-215ENST00000556011 CLEC1BQ9P126 229 aa10.07□□□□□ -0.8
PSEN1-215ENST00000556011 CELSR1Q9NYQ6 3014 aa10.07□□□□□ -0.8
PSEN1-215ENST00000556011 CACNA1DQ01668 2161 aa10.07□□□□□ -0.8
PSEN1-215ENST00000556011 PER1O15534 1290 aaPredicted RBP10.06□□□□□ -0.8
PSEN1-215ENST00000556011 GPM6BQ13491 265 aa10.06□□□□□ -0.8
PSEN1-215ENST00000556011 KCNA10Q16322 511 aa10.06□□□□□ -0.8
PSEN1-215ENST00000556011 SCYL3Q8IZE3 742 aa10.06□□□□□ -0.8
PSEN1-215ENST00000556011 PROCA1Q8NCQ7 364 aaPredicted RBP10.06□□□□□ -0.8
PSEN1-215ENST00000556011 LENG1Q96BZ8 264 aaPredicted RBP10.06□□□□□ -0.8
PSEN1-215ENST00000556011 AGBL1Q96MI9 1066 aa10.06□□□□□ -0.8
PSEN1-215ENST00000556011 EPC1Q9H2F5 836 aa10.06□□□□□ -0.8
PSEN1-215ENST00000556011 ANKMY1Q9P2S6 941 aa10.06□□□□□ -0.8
PSEN1-215ENST00000556011 ELP1O95163 1332 aa10.06□□□□□ -0.8
PSEN1-215ENST00000556011 SLC15A5A6NIM6 579 aa10.05□□□□□ -0.8
PSEN1-215ENST00000556011 ADAMTS4O75173 837 aa10.05□□□□□ -0.8
PSEN1-215ENST00000556011 PTPREP23469 700 aa10.05□□□□□ -0.8
PSEN1-215ENST00000556011 CCT4P50991 539 aaKnown RBP10.05□□□□□ -0.8
PSEN1-215ENST00000556011 COASYQ13057 564 aa10.05□□□□□ -0.8
PSEN1-215ENST00000556011 PABPC4Q13310 644 aaKnown RBP eCLIP10.05□□□□□ -0.8
PSEN1-215ENST00000556011 PROSER3Q2NL68 480 aa10.05□□□□□ -0.8
PSEN1-215ENST00000556011 C1orf210Q8IVY1 113 aa10.05□□□□□ -0.8
PSEN1-215ENST00000556011 GLT1D1Q96MS3 346 aa10.05□□□□□ -0.8
PSEN1-215ENST00000556011 RAD9AQ99638 391 aa10.05□□□□□ -0.8
PSEN1-215ENST00000556011 SEMA4GQ9NTN9 838 aa10.05□□□□□ -0.8
PSEN1-215ENST00000556011 SERPINA10Q9UK55 444 aa10.05□□□□□ -0.8
PSEN1-215ENST00000556011 MTORP42345 2549 aa10.05□□□□□ -0.8
PSEN1-215ENST00000556011 OTOGQ6ZRI0 2925 aa10.05□□□□□ -0.8
PSEN1-215ENST00000556011 MAPK8IP3Q9UPT6 1336 aa10.05□□□□□ -0.8
PSEN1-215ENST00000556011 MOXD2PA6NHM9 499 aa10.04□□□□□ -0.8
PSEN1-215ENST00000556011 H3BNC9 293 aa10.04□□□□□ -0.8
PSEN1-215ENST00000556011 GIPC1O14908 333 aa10.04□□□□□ -0.8
PSEN1-215ENST00000556011 ZNF252P-AS1Q0IIN9 211 aa10.04□□□□□ -0.8
PSEN1-215ENST00000556011 EPC2Q52LR7 807 aa10.04□□□□□ -0.8
PSEN1-215ENST00000556011 SPECC1Q5M775 1068 aa10.04□□□□□ -0.8
PSEN1-215ENST00000556011 WDR78Q5VTH9 848 aa10.04□□□□□ -0.8
PSEN1-215ENST00000556011 SNRNP48Q6IEG0 339 aaKnown RBP10.04□□□□□ -0.8
PSEN1-215ENST00000556011 FAM83AQ86UY5 434 aa10.04□□□□□ -0.8
PSEN1-215ENST00000556011 MAML2Q8IZL2 1156 aaPredicted RBP10.04□□□□□ -0.8
PSEN1-215ENST00000556011 FAM89AQ96GI7 184 aa10.04□□□□□ -0.8
PSEN1-215ENST00000556011 CRBNQ96SW2 442 aa10.04□□□□□ -0.8
PSEN1-215ENST00000556011 PAGR1Q9BTK6 254 aa10.04□□□□□ -0.8
PSEN1-215ENST00000556011 ERVK-5Q9HDB9 667 aa10.04□□□□□ -0.8
PSEN1-215ENST00000556011 CD209Q9NNX6 404 aa10.04□□□□□ -0.8
PSEN1-215ENST00000556011 URB1O60287 2271 aaKnown RBP10.04□□□□□ -0.8
PSEN1-215ENST00000556011 NLRC5Q86WI3 1866 aa10.04□□□□□ -0.8
PSEN1-215ENST00000556011 FBN1P35555 2871 aaKnown RBP10.04□□□□□ -0.8
PSEN1-215ENST00000556011 BOD1L1Q8NFC6 3051 aa10.03□□□□□ -0.8
PSEN1-215ENST00000556011 SPEF2Q9C093 1822 aa10.03□□□□□ -0.8
PSEN1-215ENST00000556011 A0A0U1RQG5 324 aaPredicted RBP10.03□□□□□ -0.8
PSEN1-215ENST00000556011 POTEMA6NI47 508 aa10.03□□□□□ -0.8
PSEN1-215ENST00000556011 GLRX3O76003 335 aaKnown RBP10.03□□□□□ -0.8
PSEN1-215ENST00000556011 DOCK1Q14185 1865 aa10.03□□□□□ -0.8
PSEN1-215ENST00000556011 POTEGQ6S5H5 508 aa10.03□□□□□ -0.8
PSEN1-215ENST00000556011 FAM181AQ8N9Y4 354 aa10.03□□□□□ -0.8
PSEN1-215ENST00000556011 ATRIPQ8WXE1 791 aa10.03□□□□□ -0.8
PSEN1-215ENST00000556011 NEK1Q96PY6 1258 aa10.03□□□□□ -0.8
PSEN1-215ENST00000556011 MKNK1Q9BUB5 465 aa10.03□□□□□ -0.8
PSEN1-215ENST00000556011 TIMELESSQ9UNS1 1208 aa10.03□□□□□ -0.8
PSEN1-215ENST00000556011 TTF2Q9UNY4 1162 aaKnown RBP10.03□□□□□ -0.8
PSEN1-215ENST00000556011 ZNF236Q9UL36 1845 aa10.03□□□□□ -0.8
PSEN1-215ENST00000556011 PDZD2O15018 2839 aa10.02□□□□□ -0.8
PSEN1-215ENST00000556011 STK25O00506 426 aa10.02□□□□□ -0.81
PSEN1-215ENST00000556011 ASGR2P07307 311 aa10.02□□□□□ -0.81
PSEN1-215ENST00000556011 ATF7P17544 494 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-215ENST00000556011 KCNJ6P48051 423 aa10.02□□□□□ -0.81
PSEN1-215ENST00000556011 HERVK_113P62684 666 aa10.02□□□□□ -0.81
PSEN1-215ENST00000556011 IRX3P78415 501 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms