RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 GTF3C6Q969F1 213 aa7.59□□□□□ -1.19
PSEN1-214ENST00000555867 ZNF274Q96GC6 653 aaPredicted RBP7.59□□□□□ -1.19
PSEN1-214ENST00000555867 GUCD1Q96NT3 240 aa7.59□□□□□ -1.19
PSEN1-214ENST00000555867 GPCPD1Q9NPB8 672 aa7.59□□□□□ -1.19
PSEN1-214ENST00000555867 TPCN1Q9ULQ1 816 aa7.59□□□□□ -1.19
PSEN1-214ENST00000555867 TULP1O00294 542 aaPredicted RBP7.58□□□□□ -1.2
PSEN1-214ENST00000555867 PFKFB2O60825 505 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 LARGE1O95461 756 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 XRCC6P12956 609 aaKnown RBP eCLIP7.58□□□□□ -1.2
PSEN1-214ENST00000555867 GNAT2P19087 354 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 ADORA1P30542 326 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 ADD2P35612 726 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 GMPRP36959 345 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 MCAMP43121 646 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 ZAP70P43403 619 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 CCDC173Q0VFZ6 552 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 MAP3K12Q12852 859 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 TRDNQ13061 729 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 ATL3Q6DD88 541 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 LRSAM1Q6UWE0 723 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 CCDC129Q6ZRS4 1044 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 Q6ZUG5 572 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 RALYLQ86SE5 291 aaKnown RBP7.58□□□□□ -1.2
PSEN1-214ENST00000555867 OGFOD1Q8N543 542 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 FAM184AQ8NB25 1140 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 ZSCAN1Q8NBB4 408 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 U2AF1L4Q8WU68 220 aaKnown RBP7.58□□□□□ -1.2
PSEN1-214ENST00000555867 SEC62Q99442 399 aaKnown RBP7.58□□□□□ -1.2
PSEN1-214ENST00000555867 SCAND2PQ9GZW5 306 aaPredicted RBP7.58□□□□□ -1.2
PSEN1-214ENST00000555867 RNF208Q9H0X6 261 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 ZSCAN16Q9H4T2 348 aaPredicted RBP7.58□□□□□ -1.2
PSEN1-214ENST00000555867 ELP3Q9H9T3 547 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 ZFYVE28Q9HCC9 887 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 FAM217BQ9NTX9 383 aaPredicted RBP7.58□□□□□ -1.2
PSEN1-214ENST00000555867 GNL3LQ9NVN8 582 aaKnown RBP7.58□□□□□ -1.2
PSEN1-214ENST00000555867 MTMR6Q9Y217 621 aa7.58□□□□□ -1.2
PSEN1-214ENST00000555867 LAMA2P24043 3122 aaKnown RBP7.57□□□□□ -1.2
PSEN1-214ENST00000555867 CCL15-CCL14A0A0B4J2E2 113 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 VPS37CA5D8V6 355 aaPredicted RBP7.57□□□□□ -1.2
PSEN1-214ENST00000555867 E7EWF7 191 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 GPAA1O43292 621 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 PPP1R12BO60237 982 aaPredicted RBP7.57□□□□□ -1.2
PSEN1-214ENST00000555867 TLR2O60603 784 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 CCNYL3P0C7X3 344 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 CPA1P15085 419 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 GRK4P32298 578 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 MCM5P33992 734 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 NASPP49321 788 aaPredicted RBP7.57□□□□□ -1.2
PSEN1-214ENST00000555867 EVCP57679 992 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 SH3BP2P78314 561 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 EXOSC10Q01780 885 aaKnown RBP7.57□□□□□ -1.2
PSEN1-214ENST00000555867 UBE4AQ14139 1066 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 ALX1Q15699 326 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 CCL15Q16663 113 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 CCDC183Q5T5S1 534 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 CCDC102BQ68D86 513 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 NAA16Q6N069 864 aaPredicted RBP7.57□□□□□ -1.2
PSEN1-214ENST00000555867 TXNRD3Q86VQ6 643 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 KIAA0825Q8IV33 1275 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 NCOA7Q8NI08 942 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 SMARCC2Q8TAQ2 1214 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 GPT2Q8TD30 523 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 OSBP2Q969R2 916 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 OPTNQ96CV9 577 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 MTA3Q9BTC8 594 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 UNC93B1Q9H1C4 597 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 SRRDQ9UH36 339 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 ZMYND8Q9ULU4 1186 aaPredicted RBP7.57□□□□□ -1.2
PSEN1-214ENST00000555867 NDUFB9Q9Y6M9 179 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 OTOFQ9HC10 1997 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 MUC6Q6W4X9 2439 aa7.57□□□□□ -1.2
PSEN1-214ENST00000555867 PDS5AQ29RF7 1337 aaKnown RBP7.56□□□□□ -1.2
PSEN1-214ENST00000555867 RPTORQ8N122 1335 aa7.56□□□□□ -1.2
PSEN1-214ENST00000555867 UNCXA6NJT0 531 aa7.56□□□□□ -1.2
PSEN1-214ENST00000555867 H3BM21 787 aa7.56□□□□□ -1.2
PSEN1-214ENST00000555867 M0R2C6 588 aa7.56□□□□□ -1.2
PSEN1-214ENST00000555867 ZNF213O14771 459 aa7.56□□□□□ -1.2
PSEN1-214ENST00000555867 SGPL1O95470 568 aa7.56□□□□□ -1.2
PSEN1-214ENST00000555867 IREB2P48200 963 aaKnown RBP7.56□□□□□ -1.2
PSEN1-214ENST00000555867 ST3GAL1Q11201 340 aa7.56□□□□□ -1.2
PSEN1-214ENST00000555867 SLC9C2Q5TAH2 1124 aa7.56□□□□□ -1.2
PSEN1-214ENST00000555867 STRIP1Q5VSL9 837 aa7.56□□□□□ -1.2
PSEN1-214ENST00000555867 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-214ENST00000555867 ANKRD18AQ8IVF6 992 aa7.56□□□□□ -1.2
PSEN1-214ENST00000555867 ANKRD13AQ8IZ07 590 aa7.56□□□□□ -1.2
PSEN1-214ENST00000555867 SPATA5Q8NB90 893 aa7.56□□□□□ -1.2
PSEN1-214ENST00000555867 BRF1Q92994 677 aa7.56□□□□□ -1.2
PSEN1-214ENST00000555867 TRIM44Q96DX7 344 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-214ENST00000555867 CCDC85AQ96PX6 553 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-214ENST00000555867 CNNM2Q9H8M5 875 aa7.56□□□□□ -1.2
PSEN1-214ENST00000555867 CDH23Q9H251 3354 aa7.56□□□□□ -1.2
PSEN1-214ENST00000555867 MYH6P13533 1939 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 CLRN2A0PK11 232 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 BTBD19C9JJ37 291 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 H3BQV1 296 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 IDH1O75874 414 aaKnown RBP7.55□□□□□ -1.2
PSEN1-214ENST00000555867 GNRH1P01148 92 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 FDX1P10109 184 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 PDE6AP16499 860 aa7.55□□□□□ -1.2
PSEN1-214ENST00000555867 SYN1P17600 705 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms