RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 SLFN13Q68D06 897 aa16.38■□□□□ 0.21
PCNX4-209ENST00000555569 KIFC2Q96AC6 838 aa16.38■□□□□ 0.21
PCNX4-209ENST00000555569 MAML3Q96JK9 1138 aa16.38■□□□□ 0.21
PCNX4-209ENST00000555569 TEX13BQ9BXU2 312 aa16.38■□□□□ 0.21
PCNX4-209ENST00000555569 OSBPL3Q9H4L5 887 aa16.38■□□□□ 0.21
PCNX4-209ENST00000555569 INCENPQ9NQS7 918 aa16.38■□□□□ 0.21
PCNX4-209ENST00000555569 CTDP1Q9Y5B0 961 aaPredicted RBP16.38■□□□□ 0.21
PCNX4-209ENST00000555569 SMCHD1A6NHR9 2005 aa16.38■□□□□ 0.21
PCNX4-209ENST00000555569 ORC4O43929 436 aa16.37■□□□□ 0.21
PCNX4-209ENST00000555569 ZBED4O75132 1171 aa16.37■□□□□ 0.21
PCNX4-209ENST00000555569 FGAP02671 866 aa16.37■□□□□ 0.21
PCNX4-209ENST00000555569 HSPD1P10809 573 aaKnown RBP16.37■□□□□ 0.21
PCNX4-209ENST00000555569 COL6A1P12109 1028 aa16.37■□□□□ 0.21
PCNX4-209ENST00000555569 BMP3P12645 472 aa16.37■□□□□ 0.21
PCNX4-209ENST00000555569 C1QBPQ07021 282 aaKnown RBP16.37■□□□□ 0.21
PCNX4-209ENST00000555569 SNRNP48Q6IEG0 339 aaKnown RBP16.37■□□□□ 0.21
PCNX4-209ENST00000555569 ZNF589Q86UQ0 364 aaPredicted RBP16.37■□□□□ 0.21
PCNX4-209ENST00000555569 C7orf61Q8IZ16 206 aa16.37■□□□□ 0.21
PCNX4-209ENST00000555569 TACC3Q9Y6A5 838 aa16.37■□□□□ 0.21
PCNX4-209ENST00000555569 ATP2A1O14983 1001 aa16.36■□□□□ 0.21
PCNX4-209ENST00000555569 RANBP6O60518 1105 aaKnown RBP16.36■□□□□ 0.21
PCNX4-209ENST00000555569 PGK2P07205 417 aa16.36■□□□□ 0.21
PCNX4-209ENST00000555569 CPXCR1Q8N123 301 aa16.36■□□□□ 0.21
PCNX4-209ENST00000555569 SLC38A10Q9HBR0 1119 aa16.36■□□□□ 0.21
PCNX4-209ENST00000555569 RBM27Q9P2N5 1060 aaKnown RBP16.36■□□□□ 0.21
PCNX4-209ENST00000555569 ISY1Q9ULR0 285 aaKnown RBP16.36■□□□□ 0.21
PCNX4-209ENST00000555569 DIS3Q9Y2L1 958 aaKnown RBP16.36■□□□□ 0.21
PCNX4-209ENST00000555569 ZMYM6O95789 1325 aa16.36■□□□□ 0.21
PCNX4-209ENST00000555569 CCDC171Q6TFL3 1326 aa16.36■□□□□ 0.21
PCNX4-209ENST00000555569 SEPT4O43236 478 aa16.35■□□□□ 0.21
PCNX4-209ENST00000555569 FGRP09769 529 aa16.35■□□□□ 0.21
PCNX4-209ENST00000555569 SDSP20132 328 aa16.35■□□□□ 0.21
PCNX4-209ENST00000555569 FXR1P51114 621 aaKnown RBP eCLIP16.35■□□□□ 0.21
PCNX4-209ENST00000555569 MFAP1P55081 439 aaKnown RBP16.35■□□□□ 0.21
PCNX4-209ENST00000555569 ZNF792Q3KQV3 632 aa16.35■□□□□ 0.21
PCNX4-209ENST00000555569 PRAMEF19Q5SWL8 479 aa16.35■□□□□ 0.21
PCNX4-209ENST00000555569 GMCL1Q96IK5 515 aa16.35■□□□□ 0.21
PCNX4-209ENST00000555569 RAVER2Q9HCJ3 691 aaKnown RBP16.35■□□□□ 0.21
PCNX4-209ENST00000555569 IL17RBQ9NRM6 502 aa16.35■□□□□ 0.21
PCNX4-209ENST00000555569 TOMM22Q9NS69 142 aa16.35■□□□□ 0.21
PCNX4-209ENST00000555569 STX8Q9UNK0 236 aa16.35■□□□□ 0.21
PCNX4-209ENST00000555569 RIPK3Q9Y572 518 aa16.35■□□□□ 0.21
PCNX4-209ENST00000555569 TMEM232C9JQI7 657 aa16.34■□□□□ 0.21
PCNX4-209ENST00000555569 NMT2O60551 498 aa16.34■□□□□ 0.21
PCNX4-209ENST00000555569 FDX1P10109 184 aa16.34■□□□□ 0.21
PCNX4-209ENST00000555569 SLC1A4P43007 532 aa16.34■□□□□ 0.21
PCNX4-209ENST00000555569 SLC4A3P48751 1232 aa16.34■□□□□ 0.21
PCNX4-209ENST00000555569 STAT2P52630 851 aa16.34■□□□□ 0.21
PCNX4-209ENST00000555569 FAM160B2Q86V87 743 aa16.34■□□□□ 0.21
PCNX4-209ENST00000555569 CHURC1Q8WUH1 139 aa16.34■□□□□ 0.21
PCNX4-209ENST00000555569 CHMP4CQ96CF2 233 aa16.34■□□□□ 0.21
PCNX4-209ENST00000555569 PRO3102Q9H379 93 aa16.34■□□□□ 0.21
PCNX4-209ENST00000555569 NRBP1Q9UHY1 535 aa16.34■□□□□ 0.21
PCNX4-209ENST00000555569 DNM1LO00429 736 aa16.33■□□□□ 0.2
PCNX4-209ENST00000555569 MCCP23508 829 aa16.33■□□□□ 0.2
PCNX4-209ENST00000555569 NOVP48745 357 aa16.33■□□□□ 0.2
PCNX4-209ENST00000555569 OAZ1P54368 228 aa16.33■□□□□ 0.2
PCNX4-209ENST00000555569 HAND2P61296 217 aa16.33■□□□□ 0.2
PCNX4-209ENST00000555569 IKQ13123 557 aaPredicted RBP16.33■□□□□ 0.2
PCNX4-209ENST00000555569 RRP12Q5JTH9 1297 aaKnown RBP16.33■□□□□ 0.2
PCNX4-209ENST00000555569 ANO1Q5XXA6 986 aa16.33■□□□□ 0.2
PCNX4-209ENST00000555569 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.33■□□□□ 0.2
PCNX4-209ENST00000555569 ARRDC4Q8NCT1 418 aa16.33■□□□□ 0.2
PCNX4-209ENST00000555569 STAG1Q8WVM7 1258 aa16.33■□□□□ 0.2
PCNX4-209ENST00000555569 DDX11Q96FC9 970 aa16.33■□□□□ 0.2
PCNX4-209ENST00000555569 TINF2Q9BSI4 451 aa16.33■□□□□ 0.2
PCNX4-209ENST00000555569 SENP6Q9GZR1 1112 aaPredicted RBP16.33■□□□□ 0.2
PCNX4-209ENST00000555569 ZMYND8Q9ULU4 1186 aaPredicted RBP16.33■□□□□ 0.2
PCNX4-209ENST00000555569 MCM3APO60318 1980 aa16.33■□□□□ 0.2
PCNX4-209ENST00000555569 PLA2G6O60733 806 aa16.32■□□□□ 0.2
PCNX4-209ENST00000555569 LAMA4Q16363 1823 aa16.32■□□□□ 0.2
PCNX4-209ENST00000555569 LRRC26Q2I0M4 334 aa16.32■□□□□ 0.2
PCNX4-209ENST00000555569 CHST13Q8NET6 341 aa16.32■□□□□ 0.2
PCNX4-209ENST00000555569 DIAPH3Q9NSV4 1193 aa16.32■□□□□ 0.2
PCNX4-209ENST00000555569 FBXO40Q9UH90 709 aa16.32■□□□□ 0.2
PCNX4-209ENST00000555569 DNAJC25-GNG10A0A024R161 153 aa16.31■□□□□ 0.2
PCNX4-209ENST00000555569 KBTBD13C9JR72 458 aa16.31■□□□□ 0.2
PCNX4-209ENST00000555569 HIP1O00291 1037 aa16.31■□□□□ 0.2
PCNX4-209ENST00000555569 SYN1P17600 705 aa16.31■□□□□ 0.2
PCNX4-209ENST00000555569 AKNAD1Q5T1N1 836 aa16.31■□□□□ 0.2
PCNX4-209ENST00000555569 GJC2Q5T442 439 aaPredicted RBP16.31■□□□□ 0.2
PCNX4-209ENST00000555569 RCSD1Q6JBY9 416 aa16.31■□□□□ 0.2
PCNX4-209ENST00000555569 CWC27Q6UX04 472 aaKnown RBP16.31■□□□□ 0.2
PCNX4-209ENST00000555569 KCTD1Q719H9 257 aa16.31■□□□□ 0.2
PCNX4-209ENST00000555569 MSL3Q8N5Y2 521 aaKnown RBP16.31■□□□□ 0.2
PCNX4-209ENST00000555569 TCP11L1Q9NUJ3 509 aa16.31■□□□□ 0.2
PCNX4-209ENST00000555569 MTMR7Q9Y216 660 aa16.31■□□□□ 0.2
PCNX4-209ENST00000555569 RANBP2P49792 3224 aaKnown RBP16.31■□□□□ 0.2
PCNX4-209ENST00000555569 TOP1P11387 765 aaKnown RBP16.3■□□□□ 0.2
PCNX4-209ENST00000555569 PCP11498 1178 aaKnown RBP16.3■□□□□ 0.2
PCNX4-209ENST00000555569 TAL1P17542 331 aaPredicted RBP16.3■□□□□ 0.2
PCNX4-209ENST00000555569 CCDC96Q2M329 555 aa16.3■□□□□ 0.2
PCNX4-209ENST00000555569 MFSD6Q6ZSS7 791 aa16.3■□□□□ 0.2
PCNX4-209ENST00000555569 RASGRP2Q7LDG7 609 aa16.3■□□□□ 0.2
PCNX4-209ENST00000555569 TBC1D10CQ8IV04 446 aa16.3■□□□□ 0.2
PCNX4-209ENST00000555569 ANKRD35Q8N283 1001 aa16.3■□□□□ 0.2
PCNX4-209ENST00000555569 DCAF4Q8WV16 495 aa16.3■□□□□ 0.2
PCNX4-209ENST00000555569 SYNGAP1Q96PV0 1343 aa16.29■□□□□ 0.2
PCNX4-209ENST00000555569 A0A1W2PPC1 479 aa16.29■□□□□ 0.2
PCNX4-209ENST00000555569 MYCNP04198 464 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms