RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 STX10O60499 249 aa26.92■■□□□ 1.9
STRN3-207ENST00000555358 SPECC1LQ69YQ0 1117 aa26.92■■□□□ 1.9
STRN3-207ENST00000555358 TRIM22Q8IYM9 498 aa26.92■■□□□ 1.9
STRN3-207ENST00000555358 DDX4Q9NQI0 724 aaKnown RBP26.92■■□□□ 1.9
STRN3-207ENST00000555358 EFCAB8A8MWE9 144 aa26.91■■□□□ 1.9
STRN3-207ENST00000555358 ACTN4O43707 911 aaKnown RBP26.91■■□□□ 1.9
STRN3-207ENST00000555358 PNMA6AP0CW24 399 aaPredicted RBP26.91■■□□□ 1.9
STRN3-207ENST00000555358 APOBEC3HQ6NTF7 200 aaKnown RBP26.91■■□□□ 1.9
STRN3-207ENST00000555358 MNS1Q8NEH6 495 aa26.91■■□□□ 1.9
STRN3-207ENST00000555358 SMARCE1Q969G3 411 aa26.91■■□□□ 1.9
STRN3-207ENST00000555358 TEKT1Q969V4 418 aa26.91■■□□□ 1.9
STRN3-207ENST00000555358 CARD6Q9BX69 1037 aa26.91■■□□□ 1.9
STRN3-207ENST00000555358 IL17RBQ9NRM6 502 aa26.91■■□□□ 1.9
STRN3-207ENST00000555358 USP17L3A6NCW0 530 aa26.9■■□□□ 1.9
STRN3-207ENST00000555358 USP17L4A6NCW7 530 aa26.9■■□□□ 1.9
STRN3-207ENST00000555358 YDJCA8MPS7 323 aa26.9■■□□□ 1.9
STRN3-207ENST00000555358 RCAN1P53805 252 aa26.9■■□□□ 1.9
STRN3-207ENST00000555358 NR5A1Q13285 461 aa26.9■■□□□ 1.9
STRN3-207ENST00000555358 RCSD1Q6JBY9 416 aa26.9■■□□□ 1.9
STRN3-207ENST00000555358 HHIPL2Q6UWX4 724 aa26.9■■□□□ 1.9
STRN3-207ENST00000555358 USP17L1Q7RTZ2 530 aa26.9■■□□□ 1.9
STRN3-207ENST00000555358 GRAMD1CQ8IYS0 662 aa26.9■■□□□ 1.9
STRN3-207ENST00000555358 CRACR2BQ8N4Y2 399 aaPredicted RBP26.9■■□□□ 1.9
STRN3-207ENST00000555358 TRIML1Q8N9V2 468 aa26.9■■□□□ 1.9
STRN3-207ENST00000555358 USP40Q9NVE5 1235 aa26.9■■□□□ 1.9
STRN3-207ENST00000555358 DACH1Q9UI36 760 aa26.9■■□□□ 1.9
STRN3-207ENST00000555358 SRPRBQ9Y5M8 271 aaKnown RBP26.9■■□□□ 1.9
STRN3-207ENST00000555358 DEXIO95424 95 aa26.9■■□□□ 1.9
STRN3-207ENST00000555358 CRKP46108 304 aa26.9■■□□□ 1.9
STRN3-207ENST00000555358 TROAPQ12815 778 aa26.9■■□□□ 1.9
STRN3-207ENST00000555358 CATIPQ7Z7H3 387 aa26.9■■□□□ 1.9
STRN3-207ENST00000555358 TRMT44Q8IYL2 757 aaKnown RBP26.9■■□□□ 1.9
STRN3-207ENST00000555358 SUPT20HQ8NEM7 779 aa26.9■■□□□ 1.9
STRN3-207ENST00000555358 SPATA20Q8TB22 786 aa26.9■■□□□ 1.9
STRN3-207ENST00000555358 CDC42EP5Q6NZY7 148 aa26.89■■□□□ 1.9
STRN3-207ENST00000555358 TOGARAM2Q6ZUX3 1019 aa26.89■■□□□ 1.9
STRN3-207ENST00000555358 MYH6P13533 1939 aa26.89■■□□□ 1.9
STRN3-207ENST00000555358 GOLGA6L9A6NEM1 432 aa26.89■■□□□ 1.89
STRN3-207ENST00000555358 RASA1P20936 1047 aa26.89■■□□□ 1.89
STRN3-207ENST00000555358 CDK8P49336 464 aa26.89■■□□□ 1.89
STRN3-207ENST00000555358 ADKP55263 362 aaKnown RBP26.89■■□□□ 1.89
STRN3-207ENST00000555358 PDILTQ8N807 584 aa26.89■■□□□ 1.89
STRN3-207ENST00000555358 WDR24Q96S15 920 aa26.89■■□□□ 1.89
STRN3-207ENST00000555358 C16orf86Q6ZW13 317 aa26.88■■□□□ 1.89
STRN3-207ENST00000555358 OXER1Q8TDS5 423 aa26.88■■□□□ 1.89
STRN3-207ENST00000555358 CDK11BP21127 795 aaKnown RBP26.88■■□□□ 1.89
STRN3-207ENST00000555358 PLA2G4AP47712 749 aa26.88■■□□□ 1.89
STRN3-207ENST00000555358 R3HDM1Q15032 1099 aaKnown RBP26.88■■□□□ 1.89
STRN3-207ENST00000555358 USP49Q70CQ1 688 aa26.88■■□□□ 1.89
STRN3-207ENST00000555358 ZNF444Q8N0Y2 327 aaPredicted RBP26.88■■□□□ 1.89
STRN3-207ENST00000555358 ARGLU1Q9NWB6 273 aaPredicted RBP26.88■■□□□ 1.89
STRN3-207ENST00000555358 CCDC196A0A1B0GTZ2 297 aa26.87■■□□□ 1.89
STRN3-207ENST00000555358 FKBP1AP62942 108 aaKnown RBP26.87■■□□□ 1.89
STRN3-207ENST00000555358 MAP3K9P80192 1104 aa26.87■■□□□ 1.89
STRN3-207ENST00000555358 FAM177A1Q8N128 213 aaPredicted RBP26.87■■□□□ 1.89
STRN3-207ENST00000555358 SAMSN1Q9NSI8 373 aaKnown RBP26.87■■□□□ 1.89
STRN3-207ENST00000555358 TSPY3P0CV98 308 aa26.86■■□□□ 1.89
STRN3-207ENST00000555358 TSPY8P0CW00 308 aa26.86■■□□□ 1.89
STRN3-207ENST00000555358 FAM193AP78312 1265 aa26.86■■□□□ 1.89
STRN3-207ENST00000555358 NR1I3Q14994 352 aa26.86■■□□□ 1.89
STRN3-207ENST00000555358 RTKN2Q8IZC4 609 aa26.86■■□□□ 1.89
STRN3-207ENST00000555358 KIFC2Q96AC6 838 aa26.86■■□□□ 1.89
STRN3-207ENST00000555358 ZNF277Q9NRM2 450 aaPredicted RBP26.86■■□□□ 1.89
STRN3-207ENST00000555358 BAZ2BQ9UIF8 2168 aaKnown RBP26.86■■□□□ 1.89
STRN3-207ENST00000555358 PLEKHA8P1O95397 391 aa26.86■■□□□ 1.89
STRN3-207ENST00000555358 GNG11P61952 73 aa26.86■■□□□ 1.89
STRN3-207ENST00000555358 KANK3Q6NY19 840 aa26.86■■□□□ 1.89
STRN3-207ENST00000555358 TMCO3Q6UWJ1 677 aa26.86■■□□□ 1.89
STRN3-207ENST00000555358 MTFR1LQ9H019 292 aa26.86■■□□□ 1.89
STRN3-207ENST00000555358 CSRNP2Q9H175 543 aa26.86■■□□□ 1.89
STRN3-207ENST00000555358 COL4A5P29400 1685 aa26.86■■□□□ 1.89
STRN3-207ENST00000555358 CASQ1P31415 396 aa26.85■■□□□ 1.89
STRN3-207ENST00000555358 NFIAQ12857 509 aa26.85■■□□□ 1.89
STRN3-207ENST00000555358 SHISA4Q96DD7 197 aa26.85■■□□□ 1.89
STRN3-207ENST00000555358 ZDHHC15Q96MV8 337 aa26.85■■□□□ 1.89
STRN3-207ENST00000555358 CEP131Q9UPN4 1083 aa26.85■■□□□ 1.89
STRN3-207ENST00000555358 MRFAP1Q9Y605 127 aa26.85■■□□□ 1.89
STRN3-207ENST00000555358 A0A1B0GTH6 734 aa26.85■■□□□ 1.89
STRN3-207ENST00000555358 DDAH1O94760 285 aa26.85■■□□□ 1.89
STRN3-207ENST00000555358 TPM1P09493 284 aa26.85■■□□□ 1.89
STRN3-207ENST00000555358 ERCC5P28715 1186 aaPredicted RBP26.85■■□□□ 1.89
STRN3-207ENST00000555358 PSMD1Q99460 953 aa26.85■■□□□ 1.89
STRN3-207ENST00000555358 RBM5P52756 815 aaKnown RBP eCLIP26.84■■□□□ 1.89
STRN3-207ENST00000555358 APTXQ7Z2E3 356 aaKnown RBP26.84■■□□□ 1.89
STRN3-207ENST00000555358 CACNB3P54284 484 aa26.84■■□□□ 1.89
STRN3-207ENST00000555358 FUT2Q10981 343 aa26.84■■□□□ 1.89
STRN3-207ENST00000555358 CABP5Q9NP86 173 aa26.84■■□□□ 1.89
STRN3-207ENST00000555358 PPP1R1BQ9UD71 204 aaPredicted RBP26.84■■□□□ 1.89
STRN3-207ENST00000555358 PSME4Q14997 1843 aa26.83■■□□□ 1.89
STRN3-207ENST00000555358 POLD1P28340 1107 aa26.83■■□□□ 1.89
STRN3-207ENST00000555358 CREBRFQ8IUR6 639 aa26.83■■□□□ 1.89
STRN3-207ENST00000555358 CALM1P0DP23 149 aa26.82■■□□□ 1.88
STRN3-207ENST00000555358 CALM2P0DP24 149 aa26.82■■□□□ 1.88
STRN3-207ENST00000555358 CALM3P0DP25 149 aa26.82■■□□□ 1.88
STRN3-207ENST00000555358 PPP2R5BQ15173 497 aa26.82■■□□□ 1.88
STRN3-207ENST00000555358 GRIPAP1Q4V328 841 aa26.82■■□□□ 1.88
STRN3-207ENST00000555358 ZNF287Q9HBT7 754 aa26.82■■□□□ 1.88
STRN3-207ENST00000555358 PIM2Q9P1W9 311 aa26.82■■□□□ 1.88
STRN3-207ENST00000555358 A0A087X0B3 334 aa26.82■■□□□ 1.88
STRN3-207ENST00000555358 hCG_1642624A0A1W2PR95 340 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms