RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 FRMPD2Q68DX3 1309 aaPredicted RBP10.21□□□□□ -0.77
TDP1-210ENST00000554976 WNT10BO00744 389 aa10.21□□□□□ -0.78
TDP1-210ENST00000554976 CCDC192P0DO97 292 aa10.21□□□□□ -0.78
TDP1-210ENST00000554976 CALML3P27482 149 aa10.21□□□□□ -0.78
TDP1-210ENST00000554976 IQCB1Q15051 598 aa10.21□□□□□ -0.78
TDP1-210ENST00000554976 CCDC73Q6ZRK6 1079 aa10.21□□□□□ -0.78
TDP1-210ENST00000554976 TEPSINQ96N21 525 aa10.21□□□□□ -0.78
TDP1-210ENST00000554976 A0A087X0B3 334 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 EIF6P56537 245 aaKnown RBP10.2□□□□□ -0.78
TDP1-210ENST00000554976 RASSF7Q02833 373 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 GNL2Q13823 731 aaKnown RBP10.2□□□□□ -0.78
TDP1-210ENST00000554976 PPP4R3BQ5MIZ7 849 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 TTC38Q5R3I4 469 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 PPP1R18Q6NYC8 613 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 ADGRF4Q8IZF3 695 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 JMYQ8N9B5 988 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 DCAF4Q8WV16 495 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 EGFRP00533 1210 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 RPS12P25398 132 aaKnown RBP10.2□□□□□ -0.78
TDP1-210ENST00000554976 NLRP5P59047 1200 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 SEPT2Q15019 361 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 CIAPIN1Q6FI81 312 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 TTBK2Q6IQ55 1244 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 C11orf57Q6ZUT1 292 aaPredicted RBP10.2□□□□□ -0.78
TDP1-210ENST00000554976 CCDC148Q8NFR7 591 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 GMCL1Q96IK5 515 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 KANSL2Q9H9L4 492 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 MYOZ2Q9NPC6 264 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 HDAC9Q9UKV0 1011 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 SSC5DA1L4H1 1573 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 A0A1W2PRG0 241 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 TRIM75PA6NK02 468 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 ACTN4O43707 911 aaKnown RBP10.2□□□□□ -0.78
TDP1-210ENST00000554976 DLGAP5Q15398 846 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 KIAA1755Q5JYT7 1200 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 NT5DC1Q5TFE4 455 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 PIK3AP1Q6ZUJ8 805 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 FAM200AQ8TCP9 573 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 RRP36Q96EU6 259 aaKnown RBP10.2□□□□□ -0.78
TDP1-210ENST00000554976 UBA5Q9GZZ9 404 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 CSRNP2Q9H175 543 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 CEP131Q9UPN4 1083 aa10.2□□□□□ -0.78
TDP1-210ENST00000554976 PTPRFP10586 1907 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 CLRN2A0PK11 232 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 NBPF9Q3BBW0 867 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 ANO6Q4KMQ2 910 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 GPATCH4Q5T3I0 446 aaKnown RBP10.19□□□□□ -0.78
TDP1-210ENST00000554976 BTNL9Q6UXG8 535 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 SH3RF1Q7Z6J0 888 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 RNF214Q8ND24 703 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 SPATA20Q8TB22 786 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 CSRNP1Q96S65 589 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 CBX8Q9HC52 389 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 BRMS1Q9HCU9 246 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 A0A0G2JMZ2 1700 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 ZNF541Q9H0D2 1346 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 PHF20L1A8MW92 1017 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 TCP10L2B9ZVM9 353 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 GDF11O95390 407 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 E2F4Q16254 413 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 ABCB5Q2M3G0 1257 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 LONRF3Q496Y0 759 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 KRBA2Q6ZNG9 492 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 USP49Q70CQ1 688 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 DHX40Q8IX18 779 aaKnown RBP10.19□□□□□ -0.78
TDP1-210ENST00000554976 RASGRP4Q8TDF6 673 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 PIBF1Q8WXW3 757 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 BPIFA3Q9BQP9 254 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 KIAA1468Q9P260 1216 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 SMCHD1A6NHR9 2005 aa10.19□□□□□ -0.78
TDP1-210ENST00000554976 PNMA6FA0A0J9YX94 578 aa10.18□□□□□ -0.78
TDP1-210ENST00000554976 KINO60870 393 aaKnown RBP10.18□□□□□ -0.78
TDP1-210ENST00000554976 BMP15O95972 392 aa10.18□□□□□ -0.78
TDP1-210ENST00000554976 SARSP49591 514 aaKnown RBP10.18□□□□□ -0.78
TDP1-210ENST00000554976 HEATR3Q7Z4Q2 680 aa10.18□□□□□ -0.78
TDP1-210ENST00000554976 FERMT2Q96AC1 680 aa10.18□□□□□ -0.78
TDP1-210ENST00000554976 COL11A1P12107 1806 aaPredicted RBP10.18□□□□□ -0.78
TDP1-210ENST00000554976 PSDA5PKW4 1024 aaPredicted RBP10.18□□□□□ -0.78
TDP1-210ENST00000554976 DPF2Q92785 391 aa10.18□□□□□ -0.78
TDP1-210ENST00000554976 TMEM39BQ9GZU3 492 aa10.18□□□□□ -0.78
TDP1-210ENST00000554976 KCNH3Q9ULD8 1083 aa10.18□□□□□ -0.78
TDP1-210ENST00000554976 SYKP43405 635 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 ICA1Q05084 483 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 TNIP1Q15025 636 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 STX1AQ16623 288 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 ARL6IP4Q66PJ3 421 aaKnown RBP10.17□□□□□ -0.78
TDP1-210ENST00000554976 RIC8AQ9NPQ8 531 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 PRDM4Q9UKN5 801 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 NOL7Q9UMY1 257 aaKnown RBP10.17□□□□□ -0.78
TDP1-210ENST00000554976 USP17L10C9JJH3 530 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 ZBTB5O15062 677 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 GH2P01242 217 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 PTGDRQ13258 359 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 ZNF174Q15697 407 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 SPECC1Q5M775 1068 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 KCTD1Q719H9 257 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 CRYGNQ8WXF5 182 aa10.17□□□□□ -0.78
TDP1-210ENST00000554976 ERCC4Q92889 916 aaPredicted RBP10.17□□□□□ -0.78
TDP1-210ENST00000554976 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.17□□□□□ -0.78
TDP1-210ENST00000554976 GPCPD1Q9NPB8 672 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms