RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 TLR3O15455 904 aaKnown RBP15.96■□□□□ 0.15
TUBB3-207ENST00000554927 C6orf222P0C671 652 aaPredicted RBP15.96■□□□□ 0.15
TUBB3-207ENST00000554927 AKR1B1P15121 316 aa15.96■□□□□ 0.15
TUBB3-207ENST00000554927 COPB2P35606 906 aa15.96■□□□□ 0.15
TUBB3-207ENST00000554927 RASIP1Q5U651 963 aa15.96■□□□□ 0.15
TUBB3-207ENST00000554927 KLHDC9Q8NEP7 349 aa15.96■□□□□ 0.15
TUBB3-207ENST00000554927 PANK1Q8TE04 598 aa15.96■□□□□ 0.15
TUBB3-207ENST00000554927 SDR42E1Q8WUS8 393 aa15.96■□□□□ 0.15
TUBB3-207ENST00000554927 EAF2Q96CJ1 260 aaPredicted RBP15.96■□□□□ 0.15
TUBB3-207ENST00000554927 DDX11Q96FC9 970 aa15.96■□□□□ 0.15
TUBB3-207ENST00000554927 SMCHD1A6NHR9 2005 aa15.95■□□□□ 0.14
TUBB3-207ENST00000554927 ELP1O95163 1332 aa15.95■□□□□ 0.14
TUBB3-207ENST00000554927 A0A0U1RQG5 324 aaPredicted RBP15.95■□□□□ 0.14
TUBB3-207ENST00000554927 VWA5AO00534 786 aa15.95■□□□□ 0.14
TUBB3-207ENST00000554927 SLC4A3P48751 1232 aa15.95■□□□□ 0.14
TUBB3-207ENST00000554927 SKIV2LQ15477 1246 aaKnown RBP15.95■□□□□ 0.14
TUBB3-207ENST00000554927 SLC9C2Q5TAH2 1124 aa15.95■□□□□ 0.14
TUBB3-207ENST00000554927 CEP85Q6P2H3 762 aa15.95■□□□□ 0.14
TUBB3-207ENST00000554927 SIAH1Q8IUQ4 282 aa15.95■□□□□ 0.14
TUBB3-207ENST00000554927 PCSK9Q8NBP7 692 aaKnown RBP15.95■□□□□ 0.14
TUBB3-207ENST00000554927 NCOR1O75376 2440 aa15.94■□□□□ 0.14
TUBB3-207ENST00000554927 DUSP11O75319 330 aaKnown RBP15.94■□□□□ 0.14
TUBB3-207ENST00000554927 HMMRO75330 724 aa15.94■□□□□ 0.14
TUBB3-207ENST00000554927 ASGR1P07306 291 aa15.94■□□□□ 0.14
TUBB3-207ENST00000554927 CYP2C18P33260 490 aa15.94■□□□□ 0.14
TUBB3-207ENST00000554927 CDK7P50613 346 aa15.94■□□□□ 0.14
TUBB3-207ENST00000554927 IRX5P78411 483 aaPredicted RBP15.94■□□□□ 0.14
TUBB3-207ENST00000554927 TTF1Q15361 905 aaPredicted RBP15.94■□□□□ 0.14
TUBB3-207ENST00000554927 CCSAPQ6IQ19 270 aaPredicted RBP15.94■□□□□ 0.14
TUBB3-207ENST00000554927 MSL3Q8N5Y2 521 aaKnown RBP15.94■□□□□ 0.14
TUBB3-207ENST00000554927 IL23AQ9NPF7 189 aa15.94■□□□□ 0.14
TUBB3-207ENST00000554927 DCP1AQ9NPI6 582 aaPredicted RBP15.94■□□□□ 0.14
TUBB3-207ENST00000554927 CXXC1Q9P0U4 656 aaPredicted RBP15.94■□□□□ 0.14
TUBB3-207ENST00000554927 PPP1R9AQ9ULJ8 1098 aa15.94■□□□□ 0.14
TUBB3-207ENST00000554927 DDX19BQ9UMR2 479 aa15.94■□□□□ 0.14
TUBB3-207ENST00000554927 SYNGAP1Q96PV0 1343 aa15.94■□□□□ 0.14
TUBB3-207ENST00000554927 NAV1Q8NEY1 1877 aa15.93■□□□□ 0.14
TUBB3-207ENST00000554927 PLXNA1Q9UIW2 1896 aa15.93■□□□□ 0.14
TUBB3-207ENST00000554927 ARVCFO00192 962 aa15.93■□□□□ 0.14
TUBB3-207ENST00000554927 SNAI1O95863 264 aaPredicted RBP15.93■□□□□ 0.14
TUBB3-207ENST00000554927 FGBP02675 491 aa15.93■□□□□ 0.14
TUBB3-207ENST00000554927 EEF2P13639 858 aaKnown RBP15.93■□□□□ 0.14
TUBB3-207ENST00000554927 PDE6AP16499 860 aa15.93■□□□□ 0.14
TUBB3-207ENST00000554927 AAK1Q2M2I8 961 aa15.93■□□□□ 0.14
TUBB3-207ENST00000554927 GNASQ5JWF2 1037 aa15.93■□□□□ 0.14
TUBB3-207ENST00000554927 FAM83BQ5T0W9 1011 aa15.93■□□□□ 0.14
TUBB3-207ENST00000554927 AACSQ86V21 672 aa15.93■□□□□ 0.14
TUBB3-207ENST00000554927 RPAP2Q8IXW5 612 aaPredicted RBP15.93■□□□□ 0.14
TUBB3-207ENST00000554927 LCORLQ8N3X6 602 aa15.93■□□□□ 0.14
TUBB3-207ENST00000554927 HERVK_113Q902F9 699 aa15.93■□□□□ 0.14
TUBB3-207ENST00000554927 CCDC17Q96LX7 622 aa15.93■□□□□ 0.14
TUBB3-207ENST00000554927 GOPCQ9HD26 462 aa15.93■□□□□ 0.14
TUBB3-207ENST00000554927 ZNF214Q9UL59 606 aaPredicted RBP15.93■□□□□ 0.14
TUBB3-207ENST00000554927 ADAMTS5Q9UNA0 930 aa15.93■□□□□ 0.14
TUBB3-207ENST00000554927 YBX2Q9Y2T7 364 aaKnown RBP15.93■□□□□ 0.14
TUBB3-207ENST00000554927 HCN4Q9Y3Q4 1203 aa15.93■□□□□ 0.14
TUBB3-207ENST00000554927 ZNF532Q9HCE3 1301 aa15.93■□□□□ 0.14
TUBB3-207ENST00000554927 CHD9Q3L8U1 2897 aa15.92■□□□□ 0.14
TUBB3-207ENST00000554927 CST5P28325 142 aaPredicted RBP15.92■□□□□ 0.14
TUBB3-207ENST00000554927 HOXD11P31277 338 aaPredicted RBP15.92■□□□□ 0.14
TUBB3-207ENST00000554927 TFF2Q03403 129 aa15.92■□□□□ 0.14
TUBB3-207ENST00000554927 ACVR2BQ13705 512 aa15.92■□□□□ 0.14
TUBB3-207ENST00000554927 PPP2R2DQ66LE6 453 aa15.92■□□□□ 0.14
TUBB3-207ENST00000554927 SNRNP48Q6IEG0 339 aaKnown RBP15.92■□□□□ 0.14
TUBB3-207ENST00000554927 OTOP2Q7RTS6 562 aa15.92■□□□□ 0.14
TUBB3-207ENST00000554927 FAM126BQ8IXS8 530 aa15.92■□□□□ 0.14
TUBB3-207ENST00000554927 AMOTL1Q8IY63 956 aa15.92■□□□□ 0.14
TUBB3-207ENST00000554927 RCAN3Q9UKA8 241 aa15.92■□□□□ 0.14
TUBB3-207ENST00000554927 EXOC6BQ9Y2D4 811 aa15.92■□□□□ 0.14
TUBB3-207ENST00000554927 CTDP1Q9Y5B0 961 aaPredicted RBP15.92■□□□□ 0.14
TUBB3-207ENST00000554927 BMP1P13497 986 aa15.91■□□□□ 0.14
TUBB3-207ENST00000554927 RABGGTBP53611 331 aa15.91■□□□□ 0.14
TUBB3-207ENST00000554927 CLASRPQ8N2M8 674 aaKnown RBP15.91■□□□□ 0.14
TUBB3-207ENST00000554927 TEX13BQ9BXU2 312 aa15.91■□□□□ 0.14
TUBB3-207ENST00000554927 HIPK3Q9H422 1215 aa15.91■□□□□ 0.14
TUBB3-207ENST00000554927 ARMT1Q9H993 441 aa15.91■□□□□ 0.14
TUBB3-207ENST00000554927 KANSL2Q9H9L4 492 aa15.91■□□□□ 0.14
TUBB3-207ENST00000554927 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.91■□□□□ 0.14
TUBB3-207ENST00000554927 MYO9BQ13459 2157 aa15.91■□□□□ 0.14
TUBB3-207ENST00000554927 ZNFX1Q9P2E3 1918 aaKnown RBP15.9■□□□□ 0.14
TUBB3-207ENST00000554927 CDK8P49336 464 aa15.9■□□□□ 0.14
TUBB3-207ENST00000554927 KCNQ1P51787 676 aa15.9■□□□□ 0.14
TUBB3-207ENST00000554927 CCDC144BQ3MJ40 725 aa15.9■□□□□ 0.14
TUBB3-207ENST00000554927 MAMDC4Q6UXC1 1216 aa15.9■□□□□ 0.14
TUBB3-207ENST00000554927 NOL8Q76FK4 1167 aaKnown RBP15.9■□□□□ 0.14
TUBB3-207ENST00000554927 REPS2Q8NFH8 660 aa15.9■□□□□ 0.14
TUBB3-207ENST00000554927 DNAJC2Q99543 621 aaKnown RBP15.9■□□□□ 0.14
TUBB3-207ENST00000554927 SLF1Q9BQI6 1058 aa15.9■□□□□ 0.14
TUBB3-207ENST00000554927 COG6Q9Y2V7 657 aa15.9■□□□□ 0.14
TUBB3-207ENST00000554927 CYP2D7A0A087X1C5 515 aa15.89■□□□□ 0.13
TUBB3-207ENST00000554927 ZBBXA8MT70 800 aa15.89■□□□□ 0.13
TUBB3-207ENST00000554927 GOLIM4O00461 696 aa15.89■□□□□ 0.13
TUBB3-207ENST00000554927 ADCY6O43306 1168 aa15.89■□□□□ 0.13
TUBB3-207ENST00000554927 PRKAB2O43741 272 aa15.89■□□□□ 0.13
TUBB3-207ENST00000554927 CCL23P55773 120 aa15.89■□□□□ 0.13
TUBB3-207ENST00000554927 GJA9P57773 515 aa15.89■□□□□ 0.13
TUBB3-207ENST00000554927 CPXCR1Q8N123 301 aa15.89■□□□□ 0.13
TUBB3-207ENST00000554927 RHPN1Q8TCX5 695 aa15.89■□□□□ 0.13
TUBB3-207ENST00000554927 KIF1BPQ96EK5 621 aa15.89■□□□□ 0.13
TUBB3-207ENST00000554927 DDRGK1Q96HY6 314 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms