RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 TRIM60Q495X7 471 aa14.6□□□□□ -0.07
MTHFD1-207ENST00000554677 C1orf53Q5VUE5 145 aa14.6□□□□□ -0.07
MTHFD1-207ENST00000554677 SH3RF1Q7Z6J0 888 aa14.6□□□□□ -0.07
MTHFD1-207ENST00000554677 PRPF38AQ8NAV1 312 aaKnown RBP14.6□□□□□ -0.07
MTHFD1-207ENST00000554677 SLC17A8Q8NDX2 589 aa14.6□□□□□ -0.07
MTHFD1-207ENST00000554677 TRIM43Q96BQ3 446 aaPredicted RBP14.6□□□□□ -0.07
MTHFD1-207ENST00000554677 GPATCH3Q96I76 525 aa14.6□□□□□ -0.07
MTHFD1-207ENST00000554677 MTMR4Q9NYA4 1195 aa14.6□□□□□ -0.07
MTHFD1-207ENST00000554677 PHF24Q9UPV7 400 aa14.6□□□□□ -0.07
MTHFD1-207ENST00000554677 UNC80Q8N2C7 3258 aa14.6□□□□□ -0.07
MTHFD1-207ENST00000554677 TTC41PQ6P2S7 1318 aa14.6□□□□□ -0.07
MTHFD1-207ENST00000554677 PRUNE2Q8WUY3 3088 aa14.59□□□□□ -0.07
MTHFD1-207ENST00000554677 FOXP2O15409 715 aa14.59□□□□□ -0.07
MTHFD1-207ENST00000554677 SNAI1O95863 264 aaPredicted RBP14.59□□□□□ -0.07
MTHFD1-207ENST00000554677 PGK1P00558 417 aa14.59□□□□□ -0.07
MTHFD1-207ENST00000554677 MYCNP04198 464 aaPredicted RBP14.59□□□□□ -0.07
MTHFD1-207ENST00000554677 COPB2P35606 906 aa14.59□□□□□ -0.07
MTHFD1-207ENST00000554677 ZMYM1Q5SVZ6 1142 aa14.59□□□□□ -0.07
MTHFD1-207ENST00000554677 SNRNP48Q6IEG0 339 aaKnown RBP14.59□□□□□ -0.07
MTHFD1-207ENST00000554677 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.59□□□□□ -0.07
MTHFD1-207ENST00000554677 ZNF444Q8N0Y2 327 aaPredicted RBP14.59□□□□□ -0.07
MTHFD1-207ENST00000554677 NEDD1Q8NHV4 660 aa14.59□□□□□ -0.07
MTHFD1-207ENST00000554677 FGD4Q96M96 766 aa14.59□□□□□ -0.07
MTHFD1-207ENST00000554677 LBHD1Q9BQE6 289 aaPredicted RBP14.59□□□□□ -0.07
MTHFD1-207ENST00000554677 TEX13BQ9BXU2 312 aa14.59□□□□□ -0.07
MTHFD1-207ENST00000554677 XPNPEP3Q9NQH7 507 aa14.59□□□□□ -0.07
MTHFD1-207ENST00000554677 PDLIM7Q9NR12 457 aa14.59□□□□□ -0.07
MTHFD1-207ENST00000554677 EYSQ5T1H1 3165 aa14.59□□□□□ -0.07
MTHFD1-207ENST00000554677 ADAMTS4O75173 837 aa14.58□□□□□ -0.08
MTHFD1-207ENST00000554677 APPP05067 770 aa14.58□□□□□ -0.08
MTHFD1-207ENST00000554677 RARBP10826 455 aa14.58□□□□□ -0.08
MTHFD1-207ENST00000554677 TDO2P48775 406 aa14.58□□□□□ -0.08
MTHFD1-207ENST00000554677 TLE2Q04725 743 aa14.58□□□□□ -0.08
MTHFD1-207ENST00000554677 SHHQ15465 462 aa14.58□□□□□ -0.08
MTHFD1-207ENST00000554677 MAMDC4Q6UXC1 1216 aa14.58□□□□□ -0.08
MTHFD1-207ENST00000554677 LENG1Q96BZ8 264 aaPredicted RBP14.58□□□□□ -0.08
MTHFD1-207ENST00000554677 SLC38A10Q9HBR0 1119 aa14.58□□□□□ -0.08
MTHFD1-207ENST00000554677 STXBP5LQ9Y2K9 1186 aa14.58□□□□□ -0.08
MTHFD1-207ENST00000554677 TACC3Q9Y6A5 838 aa14.58□□□□□ -0.08
MTHFD1-207ENST00000554677 SALL3Q9BXA9 1300 aa14.58□□□□□ -0.08
MTHFD1-207ENST00000554677 TTLL1O95922 423 aa14.57□□□□□ -0.08
MTHFD1-207ENST00000554677 ITGB8P26012 769 aa14.57□□□□□ -0.08
MTHFD1-207ENST00000554677 C9orf50Q5SZB4 431 aa14.57□□□□□ -0.08
MTHFD1-207ENST00000554677 FAM109BQ6ICB4 259 aaPredicted RBP14.57□□□□□ -0.08
MTHFD1-207ENST00000554677 CPXCR1Q8N123 301 aa14.57□□□□□ -0.08
MTHFD1-207ENST00000554677 LRRC47Q8N1G4 583 aaKnown RBP14.57□□□□□ -0.08
MTHFD1-207ENST00000554677 PIAS4Q8N2W9 510 aaPredicted RBP14.57□□□□□ -0.08
MTHFD1-207ENST00000554677 MSL3Q8N5Y2 521 aaKnown RBP14.57□□□□□ -0.08
MTHFD1-207ENST00000554677 GMCL1P1Q8NEA9 526 aa14.57□□□□□ -0.08
MTHFD1-207ENST00000554677 KLHDC9Q8NEP7 349 aa14.57□□□□□ -0.08
MTHFD1-207ENST00000554677 BADQ92934 168 aa14.57□□□□□ -0.08
MTHFD1-207ENST00000554677 KIFC2Q96AC6 838 aa14.57□□□□□ -0.08
MTHFD1-207ENST00000554677 RAVER2Q9HCJ3 691 aaKnown RBP14.57□□□□□ -0.08
MTHFD1-207ENST00000554677 INCENPQ9NQS7 918 aa14.57□□□□□ -0.08
MTHFD1-207ENST00000554677 PRKAG2Q9UGJ0 569 aa14.57□□□□□ -0.08
MTHFD1-207ENST00000554677 FEM1BQ9UK73 627 aa14.57□□□□□ -0.08
MTHFD1-207ENST00000554677 SYNPO2Q9UMS6 1093 aa14.57□□□□□ -0.08
MTHFD1-207ENST00000554677 SYNGAP1Q96PV0 1343 aa14.57□□□□□ -0.08
MTHFD1-207ENST00000554677 PLIN4Q96Q06 1357 aa14.57□□□□□ -0.08
MTHFD1-207ENST00000554677 ERC2O15083 957 aa14.56□□□□□ -0.08
MTHFD1-207ENST00000554677 ZBED4O75132 1171 aa14.56□□□□□ -0.08
MTHFD1-207ENST00000554677 AKR1A1P14550 325 aa14.56□□□□□ -0.08
MTHFD1-207ENST00000554677 IRX5P78411 483 aaPredicted RBP14.56□□□□□ -0.08
MTHFD1-207ENST00000554677 TFAP4Q01664 338 aa14.56□□□□□ -0.08
MTHFD1-207ENST00000554677 SLFN13Q68D06 897 aa14.56□□□□□ -0.08
MTHFD1-207ENST00000554677 CCSAPQ6IQ19 270 aaPredicted RBP14.56□□□□□ -0.08
MTHFD1-207ENST00000554677 DDX11Q96FC9 970 aa14.56□□□□□ -0.08
MTHFD1-207ENST00000554677 ZNF287Q9HBT7 754 aa14.56□□□□□ -0.08
MTHFD1-207ENST00000554677 A0A1W2PQ45 241 aaPredicted RBP14.55□□□□□ -0.08
MTHFD1-207ENST00000554677 A0A1W2PQY0 241 aa14.55□□□□□ -0.08
MTHFD1-207ENST00000554677 ADCY6O43306 1168 aa14.55□□□□□ -0.08
MTHFD1-207ENST00000554677 SLC4A3P48751 1232 aa14.55□□□□□ -0.08
MTHFD1-207ENST00000554677 PPARAQ07869 468 aa14.55□□□□□ -0.08
MTHFD1-207ENST00000554677 LRRFIP1Q32MZ4 808 aaKnown RBP14.55□□□□□ -0.08
MTHFD1-207ENST00000554677 CCDC129Q6ZRS4 1044 aa14.55□□□□□ -0.08
MTHFD1-207ENST00000554677 ZNF467Q7Z7K2 595 aaPredicted RBP14.55□□□□□ -0.08
MTHFD1-207ENST00000554677 RNF180Q86T96 592 aa14.55□□□□□ -0.08
MTHFD1-207ENST00000554677 GUCD1Q96NT3 240 aa14.55□□□□□ -0.08
MTHFD1-207ENST00000554677 TSEN34Q9BSV6 310 aaKnown RBP14.55□□□□□ -0.08
MTHFD1-207ENST00000554677 FSD1Q9BTV5 496 aa14.55□□□□□ -0.08
MTHFD1-207ENST00000554677 PRDM5Q9NQX1 630 aaPredicted RBP14.55□□□□□ -0.08
MTHFD1-207ENST00000554677 IL17RBQ9NRM6 502 aa14.55□□□□□ -0.08
MTHFD1-207ENST00000554677 CNPY2Q9Y2B0 182 aa14.55□□□□□ -0.08
MTHFD1-207ENST00000554677 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.55□□□□□ -0.08
MTHFD1-207ENST00000554677 CDH23Q9H251 3354 aa14.55□□□□□ -0.08
MTHFD1-207ENST00000554677 MYADML2A6NDP7 307 aa14.54□□□□□ -0.08
MTHFD1-207ENST00000554677 DLL1O00548 723 aa14.54□□□□□ -0.08
MTHFD1-207ENST00000554677 TSPY3P0CV98 308 aa14.54□□□□□ -0.08
MTHFD1-207ENST00000554677 TSPY8P0CW00 308 aa14.54□□□□□ -0.08
MTHFD1-207ENST00000554677 BMP3P12645 472 aa14.54□□□□□ -0.08
MTHFD1-207ENST00000554677 MX1P20591 662 aa14.54□□□□□ -0.08
MTHFD1-207ENST00000554677 OAZ1P54368 228 aa14.54□□□□□ -0.08
MTHFD1-207ENST00000554677 EPHB4P54760 987 aa14.54□□□□□ -0.08
MTHFD1-207ENST00000554677 PDE4BQ07343 736 aa14.54□□□□□ -0.08
MTHFD1-207ENST00000554677 ACVR2BQ13705 512 aa14.54□□□□□ -0.08
MTHFD1-207ENST00000554677 KCNA10Q16322 511 aa14.54□□□□□ -0.08
MTHFD1-207ENST00000554677 CHST13Q8NET6 341 aa14.54□□□□□ -0.08
MTHFD1-207ENST00000554677 NACAP1Q9BZK3 213 aa14.54□□□□□ -0.08
MTHFD1-207ENST00000554677 KATNBL1Q9H079 304 aa14.54□□□□□ -0.08
MTHFD1-207ENST00000554677 NAPBQ9H115 298 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms