RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 TFAP4Q01664 338 aa22.31■■□□□ 1.16
CPSF2-203ENST00000554290 PPARAQ07869 468 aa22.31■■□□□ 1.16
CPSF2-203ENST00000554290 LRRC41Q15345 812 aa22.31■■□□□ 1.16
CPSF2-203ENST00000554290 FAM47AQ5JRC9 791 aa22.31■■□□□ 1.16
CPSF2-203ENST00000554290 CPXCR1Q8N123 301 aa22.31■■□□□ 1.16
CPSF2-203ENST00000554290 KIFC2Q96AC6 838 aa22.31■■□□□ 1.16
CPSF2-203ENST00000554290 XPNPEP3Q9NQH7 507 aa22.31■■□□□ 1.16
CPSF2-203ENST00000554290 ATP11BQ9Y2G3 1177 aa22.31■■□□□ 1.16
CPSF2-203ENST00000554290 COL11A1P12107 1806 aaPredicted RBP22.3■■□□□ 1.16
CPSF2-203ENST00000554290 ADCYAP1R1P41586 468 aa22.3■■□□□ 1.16
CPSF2-203ENST00000554290 SLC4A3P48751 1232 aa22.3■■□□□ 1.16
CPSF2-203ENST00000554290 PPP4R3BQ5MIZ7 849 aa22.3■■□□□ 1.16
CPSF2-203ENST00000554290 MSL3Q8N5Y2 521 aaKnown RBP22.3■■□□□ 1.16
CPSF2-203ENST00000554290 PLIN4Q96Q06 1357 aa22.29■■□□□ 1.16
CPSF2-203ENST00000554290 FDX1P10109 184 aa22.29■■□□□ 1.16
CPSF2-203ENST00000554290 BMP3P12645 472 aa22.29■■□□□ 1.16
CPSF2-203ENST00000554290 SLFN13Q68D06 897 aa22.29■■□□□ 1.16
CPSF2-203ENST00000554290 RNF180Q86T96 592 aa22.29■■□□□ 1.16
CPSF2-203ENST00000554290 LRRC47Q8N1G4 583 aaKnown RBP22.29■■□□□ 1.16
CPSF2-203ENST00000554290 EVI5LQ96CN4 794 aa22.29■■□□□ 1.16
CPSF2-203ENST00000554290 CRBNQ96SW2 442 aa22.29■■□□□ 1.16
CPSF2-203ENST00000554290 SLC38A10Q9HBR0 1119 aa22.29■■□□□ 1.16
CPSF2-203ENST00000554290 RIPK3Q9Y572 518 aa22.29■■□□□ 1.16
CPSF2-203ENST00000554290 SALL3Q9BXA9 1300 aa22.29■■□□□ 1.16
CPSF2-203ENST00000554290 AKR1A1P14550 325 aa22.28■■□□□ 1.16
CPSF2-203ENST00000554290 OAZ1P54368 228 aa22.28■■□□□ 1.16
CPSF2-203ENST00000554290 FERMT2Q96AC1 680 aa22.28■■□□□ 1.16
CPSF2-203ENST00000554290 RAVER2Q9HCJ3 691 aaKnown RBP22.28■■□□□ 1.16
CPSF2-203ENST00000554290 FBXO40Q9UH90 709 aa22.28■■□□□ 1.16
CPSF2-203ENST00000554290 ISY1Q9ULR0 285 aaKnown RBP22.28■■□□□ 1.16
CPSF2-203ENST00000554290 ZNF865P0CJ78 1059 aaPredicted RBP22.27■■□□□ 1.16
CPSF2-203ENST00000554290 TAL1P17542 331 aaPredicted RBP22.27■■□□□ 1.16
CPSF2-203ENST00000554290 HDAC1Q13547 482 aaPredicted RBP22.27■■□□□ 1.16
CPSF2-203ENST00000554290 SNX17Q15036 470 aa22.27■■□□□ 1.16
CPSF2-203ENST00000554290 ANKRD35Q8N283 1001 aa22.27■■□□□ 1.16
CPSF2-203ENST00000554290 CHST13Q8NET6 341 aa22.27■■□□□ 1.16
CPSF2-203ENST00000554290 CHURC1Q8WUH1 139 aa22.27■■□□□ 1.16
CPSF2-203ENST00000554290 ZNFX1Q9P2E3 1918 aaKnown RBP22.27■■□□□ 1.16
CPSF2-203ENST00000554290 SYNGAP1Q96PV0 1343 aa22.27■■□□□ 1.16
CPSF2-203ENST00000554290 DNAJC25-GNG10A0A024R161 153 aa22.26■■□□□ 1.15
CPSF2-203ENST00000554290 C1orf53Q5VUE5 145 aa22.26■■□□□ 1.15
CPSF2-203ENST00000554290 MAMDC4Q6UXC1 1216 aa22.26■■□□□ 1.15
CPSF2-203ENST00000554290 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.26■■□□□ 1.15
CPSF2-203ENST00000554290 ZNF467Q7Z7K2 595 aaPredicted RBP22.26■■□□□ 1.15
CPSF2-203ENST00000554290 DEFB123Q8N688 67 aa22.26■■□□□ 1.15
CPSF2-203ENST00000554290 FAM184BQ9ULE4 1060 aa22.26■■□□□ 1.15
CPSF2-203ENST00000554290 PHF24Q9UPV7 400 aa22.26■■□□□ 1.15
CPSF2-203ENST00000554290 TSPY2A6NKD2 308 aa22.25■■□□□ 1.15
CPSF2-203ENST00000554290 TMEM232C9JQI7 657 aa22.25■■□□□ 1.15
CPSF2-203ENST00000554290 PGK1P00558 417 aa22.25■■□□□ 1.15
CPSF2-203ENST00000554290 STAT2P52630 851 aa22.25■■□□□ 1.15
CPSF2-203ENST00000554290 PDE1AP54750 535 aa22.25■■□□□ 1.15
CPSF2-203ENST00000554290 IKQ13123 557 aaPredicted RBP22.25■■□□□ 1.15
CPSF2-203ENST00000554290 TRIM60Q495X7 471 aa22.25■■□□□ 1.15
CPSF2-203ENST00000554290 CCDC129Q6ZRS4 1044 aa22.25■■□□□ 1.15
CPSF2-203ENST00000554290 FAM160B2Q86V87 743 aa22.25■■□□□ 1.15
CPSF2-203ENST00000554290 GMCL1Q96IK5 515 aa22.25■■□□□ 1.15
CPSF2-203ENST00000554290 PRDM5Q9NQX1 630 aaPredicted RBP22.25■■□□□ 1.15
CPSF2-203ENST00000554290 HELLSQ9NRZ9 838 aa22.25■■□□□ 1.15
CPSF2-203ENST00000554290 STX8Q9UNK0 236 aa22.25■■□□□ 1.15
CPSF2-203ENST00000554290 SLC1A4P43007 532 aa22.24■■□□□ 1.15
CPSF2-203ENST00000554290 CTDSPL2Q05D32 466 aa22.24■■□□□ 1.15
CPSF2-203ENST00000554290 TICAM2Q86XR7 235 aa22.24■■□□□ 1.15
CPSF2-203ENST00000554290 STAG1Q8WVM7 1258 aa22.24■■□□□ 1.15
CPSF2-203ENST00000554290 ANAPC4Q9UJX5 808 aa22.24■■□□□ 1.15
CPSF2-203ENST00000554290 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.24■■□□□ 1.15
CPSF2-203ENST00000554290 FOXP2O15409 715 aa22.23■■□□□ 1.15
CPSF2-203ENST00000554290 SNAI1O95863 264 aaPredicted RBP22.23■■□□□ 1.15
CPSF2-203ENST00000554290 MCCP23508 829 aa22.23■■□□□ 1.15
CPSF2-203ENST00000554290 AAMPQ13685 434 aa22.23■■□□□ 1.15
CPSF2-203ENST00000554290 TSEN34Q9BSV6 310 aaKnown RBP22.23■■□□□ 1.15
CPSF2-203ENST00000554290 ZHX1Q9UKY1 873 aaPredicted RBP22.23■■□□□ 1.15
CPSF2-203ENST00000554290 MYH4Q9Y623 1939 aa22.23■■□□□ 1.15
CPSF2-203ENST00000554290 SZT2Q5T011 3432 aa22.23■■□□□ 1.15
CPSF2-203ENST00000554290 TLE2Q04725 743 aa22.22■■□□□ 1.15
CPSF2-203ENST00000554290 ALX1Q15699 326 aa22.22■■□□□ 1.15
CPSF2-203ENST00000554290 RCSD1Q6JBY9 416 aa22.22■■□□□ 1.15
CPSF2-203ENST00000554290 ABHD16BQ9H3Z7 469 aa22.22■■□□□ 1.15
CPSF2-203ENST00000554290 DNAH12Q6ZR08 3092 aa22.22■■□□□ 1.15
CPSF2-203ENST00000554290 PLXNA1Q9UIW2 1896 aa22.22■■□□□ 1.15
CPSF2-203ENST00000554290 A0A1W2PQ45 241 aaPredicted RBP22.21■■□□□ 1.15
CPSF2-203ENST00000554290 A0A1W2PQY0 241 aa22.21■■□□□ 1.15
CPSF2-203ENST00000554290 RANBP6O60518 1105 aaKnown RBP22.21■■□□□ 1.15
CPSF2-203ENST00000554290 PLA2G6O60733 806 aa22.21■■□□□ 1.15
CPSF2-203ENST00000554290 ADAMTS4O75173 837 aa22.21■■□□□ 1.15
CPSF2-203ENST00000554290 ACVR2BQ13705 512 aa22.21■■□□□ 1.15
CPSF2-203ENST00000554290 VPS53Q5VIR6 699 aa22.21■■□□□ 1.15
CPSF2-203ENST00000554290 ACAD9Q9H845 621 aa22.21■■□□□ 1.15
CPSF2-203ENST00000554290 PDLIM7Q9NR12 457 aa22.21■■□□□ 1.15
CPSF2-203ENST00000554290 HOMER2Q9NSB8 354 aa22.21■■□□□ 1.15
CPSF2-203ENST00000554290 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.21■■□□□ 1.15
CPSF2-203ENST00000554290 TACC3Q9Y6A5 838 aa22.21■■□□□ 1.15
CPSF2-203ENST00000554290 ORC4O43929 436 aa22.2■■□□□ 1.14
CPSF2-203ENST00000554290 DUSP11O75319 330 aaKnown RBP22.2■■□□□ 1.14
CPSF2-203ENST00000554290 TKFCQ3LXA3 575 aa22.2■■□□□ 1.14
CPSF2-203ENST00000554290 MCMDC2Q4G0Z9 681 aa22.2■■□□□ 1.14
CPSF2-203ENST00000554290 Q7L0L9 218 aa22.2■■□□□ 1.14
CPSF2-203ENST00000554290 NUP133Q8WUM0 1156 aa22.2■■□□□ 1.14
CPSF2-203ENST00000554290 BADQ92934 168 aa22.2■■□□□ 1.14
CPSF2-203ENST00000554290 LENG1Q96BZ8 264 aaPredicted RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms