RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 ATL3Q6DD88 541 aa8.82□□□□□ -1
TDP1-209ENST00000554180 CHADLQ6NUI6 762 aa8.82□□□□□ -1
TDP1-209ENST00000554180 DLK2Q6UY11 383 aa8.82□□□□□ -1
TDP1-209ENST00000554180 CCDC84Q86UT8 332 aaPredicted RBP8.82□□□□□ -1
TDP1-209ENST00000554180 ADGRF4Q8IZF3 695 aa8.82□□□□□ -1
TDP1-209ENST00000554180 SPICE1Q8N0Z3 855 aa8.82□□□□□ -1
TDP1-209ENST00000554180 DAGLBQ8NCG7 672 aa8.82□□□□□ -1
TDP1-209ENST00000554180 PIGSQ96S52 555 aa8.82□□□□□ -1
TDP1-209ENST00000554180 PHF20Q9BVI0 1012 aa8.82□□□□□ -1
TDP1-209ENST00000554180 UBA5Q9GZZ9 404 aa8.82□□□□□ -1
TDP1-209ENST00000554180 FOXP1Q9H334 677 aaPredicted RBP8.82□□□□□ -1
TDP1-209ENST00000554180 ISY1Q9ULR0 285 aaKnown RBP8.82□□□□□ -1
TDP1-209ENST00000554180 FZD1Q9UP38 647 aa8.82□□□□□ -1
TDP1-209ENST00000554180 AFG3L2Q9Y4W6 797 aa8.82□□□□□ -1
TDP1-209ENST00000554180 hCG_1642624A0A1W2PR95 340 aa8.81□□□□□ -1
TDP1-209ENST00000554180 GOLGA6L22H0YM25 854 aa8.81□□□□□ -1
TDP1-209ENST00000554180 STXBP3O00186 592 aa8.81□□□□□ -1
TDP1-209ENST00000554180 CXCL11O14625 94 aa8.81□□□□□ -1
TDP1-209ENST00000554180 BAG4O95429 457 aaKnown RBP8.81□□□□□ -1
TDP1-209ENST00000554180 FDX1P10109 184 aa8.81□□□□□ -1
TDP1-209ENST00000554180 PTMSP20962 102 aa8.81□□□□□ -1
TDP1-209ENST00000554180 GUCY1B3Q02153 619 aa8.81□□□□□ -1
TDP1-209ENST00000554180 IKQ13123 557 aaPredicted RBP8.81□□□□□ -1
TDP1-209ENST00000554180 ZYXQ15942 572 aaKnown RBP8.81□□□□□ -1
TDP1-209ENST00000554180 KIAA1755Q5JYT7 1200 aa8.81□□□□□ -1
TDP1-209ENST00000554180 WWC2Q6AWC2 1192 aa8.81□□□□□ -1
TDP1-209ENST00000554180 MCTP1Q6DN14 999 aa8.81□□□□□ -1
TDP1-209ENST00000554180 OTUD7BQ6GQQ9 843 aa8.81□□□□□ -1
TDP1-209ENST00000554180 TTBK2Q6IQ55 1244 aa8.81□□□□□ -1
TDP1-209ENST00000554180 HEATR3Q7Z4Q2 680 aa8.81□□□□□ -1
TDP1-209ENST00000554180 FERMT3Q86UX7 667 aa8.81□□□□□ -1
TDP1-209ENST00000554180 HOMER1Q86YM7 354 aa8.81□□□□□ -1
TDP1-209ENST00000554180 DIS3L2Q8IYB7 885 aaKnown RBP8.81□□□□□ -1
TDP1-209ENST00000554180 NUP88Q99567 741 aaPredicted RBP8.81□□□□□ -1
TDP1-209ENST00000554180 ZMYND12Q9H0C1 365 aa8.81□□□□□ -1
TDP1-209ENST00000554180 GLT8D2Q9H1C3 349 aa8.81□□□□□ -1
TDP1-209ENST00000554180 CPVLQ9H3G5 476 aa8.81□□□□□ -1
TDP1-209ENST00000554180 GPBP1L1Q9HC44 474 aaPredicted RBP8.81□□□□□ -1
TDP1-209ENST00000554180 GBA2Q9HCG7 927 aaPredicted RBP8.81□□□□□ -1
TDP1-209ENST00000554180 EMILIN3Q9NT22 766 aa8.81□□□□□ -1
TDP1-209ENST00000554180 TMOD4Q9NZQ9 345 aa8.81□□□□□ -1
TDP1-209ENST00000554180 VPS54Q9P1Q0 977 aa8.81□□□□□ -1
TDP1-209ENST00000554180 PNMA2Q9UL42 364 aa8.81□□□□□ -1
TDP1-209ENST00000554180 KCNH4Q9UQ05 1017 aa8.81□□□□□ -1
TDP1-209ENST00000554180 OTOFQ9HC10 1997 aa8.81□□□□□ -1
TDP1-209ENST00000554180 MYPNQ86TC9 1320 aa8.8□□□□□ -1
TDP1-209ENST00000554180 A0A0G2JLL6 359 aaPredicted RBP8.8□□□□□ -1
TDP1-209ENST00000554180 TRIM75PA6NK02 468 aa8.8□□□□□ -1
TDP1-209ENST00000554180 DDX11L8A8MPP1 907 aa8.8□□□□□ -1
TDP1-209ENST00000554180 TRAF5O00463 557 aa8.8□□□□□ -1
TDP1-209ENST00000554180 ITGBL1O95965 494 aaPredicted RBP8.8□□□□□ -1
TDP1-209ENST00000554180 GNA11P29992 359 aa8.8□□□□□ -1
TDP1-209ENST00000554180 KRT2P35908 639 aa8.8□□□□□ -1
TDP1-209ENST00000554180 SLC16A2P36021 539 aa8.8□□□□□ -1
TDP1-209ENST00000554180 FOSBP53539 338 aa8.8□□□□□ -1
TDP1-209ENST00000554180 HMGCS2P54868 508 aa8.8□□□□□ -1
TDP1-209ENST00000554180 NAPAP54920 295 aa8.8□□□□□ -1
TDP1-209ENST00000554180 NLRP5P59047 1200 aa8.8□□□□□ -1
TDP1-209ENST00000554180 KRT85P78386 507 aa8.8□□□□□ -1
TDP1-209ENST00000554180 GNL2Q13823 731 aaKnown RBP8.8□□□□□ -1
TDP1-209ENST00000554180 NPY5RQ15761 445 aa8.8□□□□□ -1
TDP1-209ENST00000554180 CDC37Q16543 378 aaPredicted RBP8.8□□□□□ -1
TDP1-209ENST00000554180 CSPP1Q1MSJ5 1256 aa8.8□□□□□ -1
TDP1-209ENST00000554180 QRICH1Q2TAL8 776 aa8.8□□□□□ -1
TDP1-209ENST00000554180 FOXD4L5Q5VV16 416 aaPredicted RBP8.8□□□□□ -1
TDP1-209ENST00000554180 PRRT2Q7Z6L0 340 aaPredicted RBP8.8□□□□□ -1
TDP1-209ENST00000554180 NOSTRINQ8IVI9 506 aa8.8□□□□□ -1
TDP1-209ENST00000554180 C2orf69Q8N8R5 385 aa8.8□□□□□ -1
TDP1-209ENST00000554180 PRPF38AQ8NAV1 312 aaKnown RBP8.8□□□□□ -1
TDP1-209ENST00000554180 PROCA1Q8NCQ7 364 aaPredicted RBP8.8□□□□□ -1
TDP1-209ENST00000554180 BICD2Q8TD16 824 aa8.8□□□□□ -1
TDP1-209ENST00000554180 ZNF526Q8TF50 670 aaPredicted RBP8.8□□□□□ -1
TDP1-209ENST00000554180 FOXD4L4Q8WXT5 416 aaPredicted RBP8.8□□□□□ -1
TDP1-209ENST00000554180 GPKOWQ92917 476 aaPredicted RBP eCLIP8.8□□□□□ -12e-6■■■□□ 15.9
TDP1-209ENST00000554180 SHISA4Q96DD7 197 aa8.8□□□□□ -1
TDP1-209ENST00000554180 SLF1Q9BQI6 1058 aa8.8□□□□□ -1
TDP1-209ENST00000554180 AMNQ9BXJ7 453 aa8.8□□□□□ -1
TDP1-209ENST00000554180 RANBP17Q9H2T7 1088 aaKnown RBP8.8□□□□□ -1
TDP1-209ENST00000554180 ELP3Q9H9T3 547 aa8.8□□□□□ -1
TDP1-209ENST00000554180 VAT1LQ9HCJ6 419 aa8.8□□□□□ -1
TDP1-209ENST00000554180 C6orf50Q9HD87 102 aa8.8□□□□□ -1
TDP1-209ENST00000554180 GJB4Q9NTQ9 266 aa8.8□□□□□ -1
TDP1-209ENST00000554180 PRR12Q9ULL5 1215 aa8.8□□□□□ -1
TDP1-209ENST00000554180 PCDHA4Q9UN74 947 aa8.8□□□□□ -1
TDP1-209ENST00000554180 BAZ2BQ9UIF8 2168 aaKnown RBP8.79□□□□□ -1
TDP1-209ENST00000554180 KIF28PB7ZC32 967 aa8.79□□□□□ -1
TDP1-209ENST00000554180 IRF6O14896 467 aa8.79□□□□□ -1
TDP1-209ENST00000554180 CELF2O95319 508 aaKnown RBP8.79□□□□□ -1
TDP1-209ENST00000554180 MCM4P33991 863 aa8.79□□□□□ -1
TDP1-209ENST00000554180 MYSM1Q5VVJ2 828 aa8.79□□□□□ -1
TDP1-209ENST00000554180 MCTP2Q6DN12 878 aa8.79□□□□□ -1
TDP1-209ENST00000554180 TYW1BQ6NUM6 668 aa8.79□□□□□ -1
TDP1-209ENST00000554180 FBXO11Q86XK2 927 aa8.79□□□□□ -1
TDP1-209ENST00000554180 TMEM87AQ8NBN3 555 aa8.79□□□□□ -1
TDP1-209ENST00000554180 PIBF1Q8WXW3 757 aa8.79□□□□□ -1
TDP1-209ENST00000554180 KIFC2Q96AC6 838 aa8.79□□□□□ -1
TDP1-209ENST00000554180 OTUD5Q96G74 571 aa8.79□□□□□ -1
TDP1-209ENST00000554180 CLMNQ96JQ2 1002 aa8.79□□□□□ -1
TDP1-209ENST00000554180 ZNF396Q96N95 335 aaPredicted RBP8.79□□□□□ -1
TDP1-209ENST00000554180 TANGO6Q9C0B7 1094 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms