RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 RABGGTBP53611 331 aa11.71□□□□□ -0.53
CHD8-205ENST00000553651 NKX3-2P78367 333 aa11.71□□□□□ -0.53
CHD8-205ENST00000553651 MSL3Q8N5Y2 521 aaKnown RBP11.71□□□□□ -0.53
CHD8-205ENST00000553651 SLC43A3Q8NBI5 491 aa11.71□□□□□ -0.53
CHD8-205ENST00000553651 FGD4Q96M96 766 aa11.71□□□□□ -0.53
CHD8-205ENST00000553651 ANTXR1Q9H6X2 564 aa11.71□□□□□ -0.53
CHD8-205ENST00000553651 FAM184BQ9ULE4 1060 aa11.71□□□□□ -0.53
CHD8-205ENST00000553651 HCN4Q9Y3Q4 1203 aa11.71□□□□□ -0.53
CHD8-205ENST00000553651 LRRC37A2A6NM11 1700 aa11.71□□□□□ -0.54
CHD8-205ENST00000553651 MCM3APO60318 1980 aa11.7□□□□□ -0.54
CHD8-205ENST00000553651 A0A0U1RQG5 324 aaPredicted RBP11.7□□□□□ -0.54
CHD8-205ENST00000553651 VWA5AO00534 786 aa11.7□□□□□ -0.54
CHD8-205ENST00000553651 MPHOSPH10O00566 681 aaKnown RBP11.7□□□□□ -0.54
CHD8-205ENST00000553651 WDR46O15213 610 aaKnown RBP11.7□□□□□ -0.54
CHD8-205ENST00000553651 GPR37L1O60883 481 aa11.7□□□□□ -0.54
CHD8-205ENST00000553651 FGBP02675 491 aa11.7□□□□□ -0.54
CHD8-205ENST00000553651 CYP2D6P10635 497 aa11.7□□□□□ -0.54
CHD8-205ENST00000553651 GJA9P57773 515 aa11.7□□□□□ -0.54
CHD8-205ENST00000553651 KCTD2Q14681 263 aa11.7□□□□□ -0.54
CHD8-205ENST00000553651 AAK1Q2M2I8 961 aa11.7□□□□□ -0.54
CHD8-205ENST00000553651 TMEM31Q5JXX7 168 aa11.7□□□□□ -0.54
CHD8-205ENST00000553651 TMEM179Q6ZVK1 233 aa11.7□□□□□ -0.54
CHD8-205ENST00000553651 ARHGAP45Q92619 1136 aa11.7□□□□□ -0.54
CHD8-205ENST00000553651 GLT1D1Q96MS3 346 aa11.7□□□□□ -0.54
CHD8-205ENST00000553651 TNNQ9UQP3 1299 aa11.7□□□□□ -0.54
CHD8-205ENST00000553651 CNPY2Q9Y2B0 182 aa11.7□□□□□ -0.54
CHD8-205ENST00000553651 MTCH2Q9Y6C9 303 aa11.7□□□□□ -0.54
CHD8-205ENST00000553651 EPOPA6NHQ4 379 aa11.69□□□□□ -0.54
CHD8-205ENST00000553651 SMIM22K7EJ46 135 aa11.69□□□□□ -0.54
CHD8-205ENST00000553651 RFXAPO00287 272 aa11.69□□□□□ -0.54
CHD8-205ENST00000553651 GNAI2P04899 355 aa11.69□□□□□ -0.54
CHD8-205ENST00000553651 POLR3DP05423 398 aaPredicted RBP11.69□□□□□ -0.54
CHD8-205ENST00000553651 CT47B1P0C2W7 299 aaPredicted RBP11.69□□□□□ -0.54
CHD8-205ENST00000553651 AKR1B1P15121 316 aa11.69□□□□□ -0.54
CHD8-205ENST00000553651 STAT3P40763 770 aa11.69□□□□□ -0.54
CHD8-205ENST00000553651 OTOP2Q7RTS6 562 aa11.69□□□□□ -0.54
CHD8-205ENST00000553651 MICALL1Q8N3F8 863 aa11.69□□□□□ -0.54
CHD8-205ENST00000553651 DYNLL2Q96FJ2 89 aa11.69□□□□□ -0.54
CHD8-205ENST00000553651 KATNBL1Q9H079 304 aa11.69□□□□□ -0.54
CHD8-205ENST00000553651 WNT8AQ9H1J5 351 aa11.69□□□□□ -0.54
CHD8-205ENST00000553651 TSPYL2Q9H2G4 693 aaPredicted RBP11.69□□□□□ -0.54
CHD8-205ENST00000553651 PPP1R9AQ9ULJ8 1098 aa11.69□□□□□ -0.54
CHD8-205ENST00000553651 PCDHA11Q9Y5I1 949 aa11.69□□□□□ -0.54
CHD8-205ENST00000553651 GRIN2DO15399 1336 aa11.68□□□□□ -0.54
CHD8-205ENST00000553651 C6orf222P0C671 652 aaPredicted RBP11.68□□□□□ -0.54
CHD8-205ENST00000553651 RARSP54136 660 aaKnown RBP11.68□□□□□ -0.54
CHD8-205ENST00000553651 ICA1Q05084 483 aa11.68□□□□□ -0.54
CHD8-205ENST00000553651 ACVR2BQ13705 512 aa11.68□□□□□ -0.54
CHD8-205ENST00000553651 PPP2R2DQ66LE6 453 aa11.68□□□□□ -0.54
CHD8-205ENST00000553651 KRT40Q6A162 431 aa11.68□□□□□ -0.54
CHD8-205ENST00000553651 TMED8Q6PL24 325 aaPredicted RBP11.68□□□□□ -0.54
CHD8-205ENST00000553651 SAMD1Q6SPF0 538 aaPredicted RBP11.68□□□□□ -0.54
CHD8-205ENST00000553651 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHD8-205ENST00000553651 ZNF467Q7Z7K2 595 aaPredicted RBP11.68□□□□□ -0.54
CHD8-205ENST00000553651 PCSK9Q8NBP7 692 aaKnown RBP11.68□□□□□ -0.54
CHD8-205ENST00000553651 SSH3Q8TE77 659 aa11.68□□□□□ -0.54
CHD8-205ENST00000553651 EAF2Q96CJ1 260 aaPredicted RBP11.68□□□□□ -0.54
CHD8-205ENST00000553651 NOC4LQ9BVI4 516 aaKnown RBP11.68□□□□□ -0.54
CHD8-205ENST00000553651 CD320Q9NPF0 282 aa11.68□□□□□ -0.54
CHD8-205ENST00000553651 DCP1AQ9NPI6 582 aaPredicted RBP11.68□□□□□ -0.54
CHD8-205ENST00000553651 ZHX1Q9UKY1 873 aaPredicted RBP11.68□□□□□ -0.54
CHD8-205ENST00000553651 RIPK3Q9Y572 518 aa11.68□□□□□ -0.54
CHD8-205ENST00000553651 ASTN1O14525 1302 aa11.67□□□□□ -0.54
CHD8-205ENST00000553651 MYH8P13535 1937 aa11.67□□□□□ -0.54
CHD8-205ENST00000553651 FAM86C2PA6NEL3 165 aa11.67□□□□□ -0.54
CHD8-205ENST00000553651 ARHGEF15O94989 841 aa11.67□□□□□ -0.54
CHD8-205ENST00000553651 CCDC144BQ3MJ40 725 aa11.67□□□□□ -0.54
CHD8-205ENST00000553651 ALYREFQ86V81 257 aaKnown RBP11.67□□□□□ -0.54
CHD8-205ENST00000553651 CCDC8Q9H0W5 538 aaPredicted RBP11.67□□□□□ -0.54
CHD8-205ENST00000553651 HIPK3Q9H422 1215 aa11.67□□□□□ -0.54
CHD8-205ENST00000553651 ARHGEF10LQ9HCE6 1279 aa11.67□□□□□ -0.54
CHD8-205ENST00000553651 MCM9Q9NXL9 1143 aa11.67□□□□□ -0.54
CHD8-205ENST00000553651 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.67□□□□□ -0.54
CHD8-205ENST00000553651 NOP58Q9Y2X3 529 aaKnown RBP11.67□□□□□ -0.54
CHD8-205ENST00000553651 WDFY4Q6ZS81 3184 aa11.66□□□□□ -0.54
CHD8-205ENST00000553651 MAGEB6P1A0A0J9YX57 407 aa11.66□□□□□ -0.54
CHD8-205ENST00000553651 TCRBV5S4A2TA0A5A2 114 aa11.66□□□□□ -0.54
CHD8-205ENST00000553651 PI4K2BG5E9Z4 385 aa11.66□□□□□ -0.54
CHD8-205ENST00000553651 APBB1O00213 710 aa11.66□□□□□ -0.54
CHD8-205ENST00000553651 TLR3O15455 904 aaKnown RBP11.66□□□□□ -0.54
CHD8-205ENST00000553651 ANP32CO43423 234 aa11.66□□□□□ -0.54
CHD8-205ENST00000553651 EEF2P13639 858 aaKnown RBP11.66□□□□□ -0.54
CHD8-205ENST00000553651 TRIM27P14373 513 aa11.66□□□□□ -0.54
CHD8-205ENST00000553651 COPB2P35606 906 aa11.66□□□□□ -0.54
CHD8-205ENST00000553651 CCL23P55773 120 aa11.66□□□□□ -0.54
CHD8-205ENST00000553651 GNASQ5JWF2 1037 aa11.66□□□□□ -0.54
CHD8-205ENST00000553651 SDR42E1Q8WUS8 393 aa11.66□□□□□ -0.54
CHD8-205ENST00000553651 AGBL1Q96MI9 1066 aa11.66□□□□□ -0.54
CHD8-205ENST00000553651 MTIF3Q9H2K0 278 aaKnown RBP11.66□□□□□ -0.54
CHD8-205ENST00000553651 SH2D4AQ9H788 454 aa11.66□□□□□ -0.54
CHD8-205ENST00000553651 SWAP70Q9UH65 585 aa11.66□□□□□ -0.54
CHD8-205ENST00000553651 COG5Q9UP83 839 aa11.66□□□□□ -0.54
CHD8-205ENST00000553651 SLC4A7Q9Y6M7 1214 aa11.66□□□□□ -0.54
CHD8-205ENST00000553651 GREB1LQ9C091 1923 aaPredicted RBP11.66□□□□□ -0.54
CHD8-205ENST00000553651 PDE6AP16499 860 aa11.65□□□□□ -0.54
CHD8-205ENST00000553651 ATP8B2P98198 1209 aa11.65□□□□□ -0.54
CHD8-205ENST00000553651 BEX3Q00994 111 aa11.65□□□□□ -0.54
CHD8-205ENST00000553651 TTLL4Q14679 1199 aa11.65□□□□□ -0.54
CHD8-205ENST00000553651 SKIV2LQ15477 1246 aaKnown RBP11.65□□□□□ -0.54
CHD8-205ENST00000553651 FAM83BQ5T0W9 1011 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms