RNA–Protein interactions for RNA: ENST00000552810.5

CEP290-207, Transcript of centrosomal protein 290, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CEP290, Length 7,948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-207ENST00000552810 SCINQ9Y6U3 715 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 GRXCR2A6NFK2 248 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 BIRC5O15392 142 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 TATP17735 454 aaPredicted RBP8.53□□□□□ -1.04
CEP290-207ENST00000552810 MDH1BQ5I0G3 518 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 GOLGA5Q8TBA6 731 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 PPP1R36Q96LQ0 422 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 ZNF277Q9NRM2 450 aaPredicted RBP8.53□□□□□ -1.04
CEP290-207ENST00000552810 SAMSN1Q9NSI8 373 aaKnown RBP8.53□□□□□ -1.04
CEP290-207ENST00000552810 APOBEC2Q9Y235 224 aaKnown RBP8.53□□□□□ -1.04
CEP290-207ENST00000552810 CDC37Q16543 378 aaPredicted RBP8.53□□□□□ -1.04
CEP290-207ENST00000552810 KRT40Q6A162 431 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 POTEEQ6S8J3 1075 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 B4GALNT2Q8NHY0 566 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 SRPK1Q96SB4 655 aaKnown RBP8.53□□□□□ -1.04
CEP290-207ENST00000552810 KIF9Q9HAQ2 790 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 NLRC4Q9NPP4 1024 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 POTECB2RU33 542 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 MAFKO60675 156 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 EHHADHQ08426 723 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 TYW1BQ6NUM6 668 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 ADCK1Q86TW2 530 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 SESTD1Q86VW0 696 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 NSMCE1Q8WV22 266 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 ANKRD49Q8WVL7 239 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 BCL2L12Q9HB09 334 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 GPCPD1Q9NPB8 672 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 SEC24DO94855 1032 aaPredicted RBP8.53□□□□□ -1.04
CEP290-207ENST00000552810 PHKA1P46020 1223 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 NAPAP54920 295 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 KANK3Q6NY19 840 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 HEATR4Q86WZ0 1026 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.53□□□□□ -1.04
CEP290-207ENST00000552810 GANCQ8TET4 914 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 MYCBPQ99417 103 aaPredicted RBP8.53□□□□□ -1.04
CEP290-207ENST00000552810 SCGNO76038 276 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 MYBPC2Q14324 1141 aa8.53□□□□□ -1.04
CEP290-207ENST00000552810 DDX19AQ9NUU7 478 aaKnown RBP8.53□□□□□ -1.04
CEP290-207ENST00000552810 SBNO1A3KN83 1393 aa8.52□□□□□ -1.04
CEP290-207ENST00000552810 POC1B-GALNT4F8VUJ3 575 aa8.52□□□□□ -1.04
CEP290-207ENST00000552810 H3BRJ5 948 aa8.52□□□□□ -1.04
CEP290-207ENST00000552810 TRAF5O00463 557 aa8.52□□□□□ -1.04
CEP290-207ENST00000552810 RGS5O15539 181 aa8.52□□□□□ -1.04
CEP290-207ENST00000552810 S100A9P06702 114 aaKnown RBP8.52□□□□□ -1.04
CEP290-207ENST00000552810 ZFXP17010 805 aaPredicted RBP8.52□□□□□ -1.04
CEP290-207ENST00000552810 WASHC5Q12768 1159 aa8.52□□□□□ -1.04
CEP290-207ENST00000552810 TRAF1Q13077 416 aa8.52□□□□□ -1.04
CEP290-207ENST00000552810 IFT88Q13099 833 aa8.52□□□□□ -1.04
CEP290-207ENST00000552810 NKX1-1Q15270 411 aaPredicted RBP8.52□□□□□ -1.04
CEP290-207ENST00000552810 RSBN1LQ6PCB5 846 aaPredicted RBP8.52□□□□□ -1.04
CEP290-207ENST00000552810 TMTC1Q8IUR5 882 aa8.52□□□□□ -1.04
CEP290-207ENST00000552810 TRIM59Q8IWR1 403 aa8.52□□□□□ -1.04
CEP290-207ENST00000552810 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.52□□□□□ -1.04
CEP290-207ENST00000552810 MAP3K2Q9Y2U5 619 aa8.52□□□□□ -1.04
CEP290-207ENST00000552810 LINC00854A0A1B0GVQ3 168 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 GPC4O75487 556 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 GRIN1Q05586 938 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 RALGDSQ12967 914 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 STXBP4Q6ZWJ1 553 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 FCHSD1Q86WN1 690 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 SSH1Q8WYL5 1049 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 SYMPKQ92797 1274 aaKnown RBP8.52□□□□□ -1.05
CEP290-207ENST00000552810 PGBD1Q96JS3 809 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 PAGR1Q9BTK6 254 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 MYLK2Q9H1R3 596 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 KLHL31Q9H511 634 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 POLD4Q9HCU8 107 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 PSMC6P62333 389 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 CEP78Q5JTW2 689 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 ZSCAN25Q6NSZ9 544 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 RAPH1Q70E73 1250 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 ATL2Q8NHH9 583 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 IFT122Q9HBG6 1241 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.52□□□□□ -1.052e-6■□□□□ 10.7
CEP290-207ENST00000552810 PPP2R3BQ9Y5P8 575 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 FHOD3Q2V2M9 1422 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 OTOL1A6NHN0 477 aaPredicted RBP8.52□□□□□ -1.05
CEP290-207ENST00000552810 H0Y626 953 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 KITP10721 976 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 TBL3Q12788 808 aaKnown RBP8.52□□□□□ -1.05
CEP290-207ENST00000552810 CCDC93Q567U6 631 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 ARHGAP10A1A4S6 786 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 ITGAXP20702 1163 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 CCDC144BQ3MJ40 725 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 KIAA2013Q8IYS2 634 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 LSM14BQ9BX40 385 aaKnown RBP8.52□□□□□ -1.05
CEP290-207ENST00000552810 MLXIPLQ9NP71 852 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 CCDC144AA2RUR9 1427 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 OATP04181 439 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 STX1BP61266 288 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 RNF169Q8NCN4 708 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 CENPTQ96BT3 561 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 HOOK2Q96ED9 719 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 VAV3Q9UKW4 847 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 TNIKQ9UKE5 1360 aa8.52□□□□□ -1.05
CEP290-207ENST00000552810 LAMC2Q13753 1193 aa8.51□□□□□ -1.05
CEP290-207ENST00000552810 GSPT2Q8IYD1 628 aaKnown RBP8.51□□□□□ -1.05
CEP290-207ENST00000552810 NOC4LQ9BVI4 516 aaKnown RBP8.51□□□□□ -1.05
CEP290-207ENST00000552810 RPAP3Q9H6T3 665 aaPredicted RBP8.51□□□□□ -1.05
CEP290-207ENST00000552810 ZSCAN9O15535 394 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms