RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 SLF1Q9BQI6 1058 aa17.03■□□□□ 0.32
CHMP1A-210ENST00000551981 ARPP21Q9UBL0 812 aaPredicted RBP17.03■□□□□ 0.32
CHMP1A-210ENST00000551981 FAM184BQ9ULE4 1060 aa17.03■□□□□ 0.32
CHMP1A-210ENST00000551981 MROH7Q68CQ1 1323 aa17.02■□□□□ 0.32
CHMP1A-210ENST00000551981 ZBED9Q6R2W3 1325 aa17.02■□□□□ 0.32
CHMP1A-210ENST00000551981 SYNRGQ9UMZ2 1314 aa17.02■□□□□ 0.32
CHMP1A-210ENST00000551981 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.02■□□□□ 0.32
CHMP1A-210ENST00000551981 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.02■□□□□ 0.32
CHMP1A-210ENST00000551981 SMIM22K7EJ46 135 aa17.02■□□□□ 0.32
CHMP1A-210ENST00000551981 SLFNL1Q499Z3 407 aa17.02■□□□□ 0.32
CHMP1A-210ENST00000551981 SNRNP48Q6IEG0 339 aaKnown RBP17.02■□□□□ 0.32
CHMP1A-210ENST00000551981 CTR9Q6PD62 1173 aa17.02■□□□□ 0.32
CHMP1A-210ENST00000551981 CCDC174Q6PII3 467 aa17.02■□□□□ 0.32
CHMP1A-210ENST00000551981 LENG1Q96BZ8 264 aaPredicted RBP17.02■□□□□ 0.32
CHMP1A-210ENST00000551981 CTDP1Q9Y5B0 961 aaPredicted RBP17.02■□□□□ 0.32
CHMP1A-210ENST00000551981 GREB1LQ9C091 1923 aaPredicted RBP17.02■□□□□ 0.31
CHMP1A-210ENST00000551981 FAAP100Q0VG06 881 aa17.01■□□□□ 0.31
CHMP1A-210ENST00000551981 ZHX1Q9UKY1 873 aaPredicted RBP17.01■□□□□ 0.31
CHMP1A-210ENST00000551981 DDX19BQ9UMR2 479 aa17.01■□□□□ 0.31
CHMP1A-210ENST00000551981 DUSP11O75319 330 aaKnown RBP17■□□□□ 0.31
CHMP1A-210ENST00000551981 TIMP1P01033 207 aa17■□□□□ 0.31
CHMP1A-210ENST00000551981 DNAJB2P25686 324 aa17■□□□□ 0.31
CHMP1A-210ENST00000551981 KCNA10Q16322 511 aa17■□□□□ 0.31
CHMP1A-210ENST00000551981 MAMDC4Q6UXC1 1216 aa17■□□□□ 0.31
CHMP1A-210ENST00000551981 PRPF38AQ8NAV1 312 aaKnown RBP17■□□□□ 0.31
CHMP1A-210ENST00000551981 PCSK9Q8NBP7 692 aaKnown RBP17■□□□□ 0.31
CHMP1A-210ENST00000551981 KLHDC9Q8NEP7 349 aa17■□□□□ 0.31
CHMP1A-210ENST00000551981 GLT1D1Q96MS3 346 aa17■□□□□ 0.31
CHMP1A-210ENST00000551981 CHMP4BQ9H444 224 aaKnown RBP17■□□□□ 0.31
CHMP1A-210ENST00000551981 MKNK2Q9HBH9 465 aa17■□□□□ 0.31
CHMP1A-210ENST00000551981 SPC25Q9HBM1 224 aa17■□□□□ 0.31
CHMP1A-210ENST00000551981 ELP1O95163 1332 aa16.99■□□□□ 0.31
CHMP1A-210ENST00000551981 ZBED4O75132 1171 aa16.99■□□□□ 0.31
CHMP1A-210ENST00000551981 SNAI1O95863 264 aaPredicted RBP16.99■□□□□ 0.31
CHMP1A-210ENST00000551981 PPIGQ13427 754 aaKnown RBP eCLIP16.99■□□□□ 0.319e-7■■■□□ 16.3
CHMP1A-210ENST00000551981 GRIN2CQ14957 1233 aa16.99■□□□□ 0.31
CHMP1A-210ENST00000551981 ZNF467Q7Z7K2 595 aaPredicted RBP16.99■□□□□ 0.31
CHMP1A-210ENST00000551981 NUP88Q99567 741 aaPredicted RBP16.99■□□□□ 0.31
CHMP1A-210ENST00000551981 PRDM6Q9NQX0 595 aa16.99■□□□□ 0.31
CHMP1A-210ENST00000551981 NYAP2Q9P242 653 aa16.99■□□□□ 0.31
CHMP1A-210ENST00000551981 MYH4Q9Y623 1939 aa16.99■□□□□ 0.31
CHMP1A-210ENST00000551981 DNAJC25-GNG10A0A024R161 153 aa16.98■□□□□ 0.31
CHMP1A-210ENST00000551981 F5H6K3 240 aa16.98■□□□□ 0.31
CHMP1A-210ENST00000551981 ATP2A1O14983 1001 aa16.98■□□□□ 0.31
CHMP1A-210ENST00000551981 C6orf222P0C671 652 aaPredicted RBP16.98■□□□□ 0.31
CHMP1A-210ENST00000551981 CST5P28325 142 aaPredicted RBP16.98■□□□□ 0.31
CHMP1A-210ENST00000551981 SLC4A3P48751 1232 aa16.98■□□□□ 0.31
CHMP1A-210ENST00000551981 KLRC3Q07444 240 aa16.98■□□□□ 0.31
CHMP1A-210ENST00000551981 CCSAPQ6IQ19 270 aaPredicted RBP16.98■□□□□ 0.31
CHMP1A-210ENST00000551981 MFSD5Q6N075 450 aa16.98■□□□□ 0.31
CHMP1A-210ENST00000551981 SIRT2Q8IXJ6 389 aa16.98■□□□□ 0.31
CHMP1A-210ENST00000551981 VTI1AQ96AJ9 217 aa16.98■□□□□ 0.31
CHMP1A-210ENST00000551981 TIFAQ96CG3 184 aa16.98■□□□□ 0.31
CHMP1A-210ENST00000551981 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.98■□□□□ 0.31
CHMP1A-210ENST00000551981 PUS7LQ9H0K6 701 aaKnown RBP16.98■□□□□ 0.31
CHMP1A-210ENST00000551981 ZNF576Q9H609 170 aa16.98■□□□□ 0.31
CHMP1A-210ENST00000551981 ZBTB40Q9NUA8 1239 aa16.98■□□□□ 0.31
CHMP1A-210ENST00000551981 FBXO40Q9UH90 709 aa16.98■□□□□ 0.31
CHMP1A-210ENST00000551981 TBX21Q9UL17 535 aa16.98■□□□□ 0.31
CHMP1A-210ENST00000551981 NDUFB10O96000 172 aa16.97■□□□□ 0.31
CHMP1A-210ENST00000551981 CHGBP05060 677 aa16.97■□□□□ 0.31
CHMP1A-210ENST00000551981 RASA1P20936 1047 aa16.97■□□□□ 0.31
CHMP1A-210ENST00000551981 ACVR2BQ13705 512 aa16.97■□□□□ 0.31
CHMP1A-210ENST00000551981 SBK1Q52WX2 424 aa16.97■□□□□ 0.31
CHMP1A-210ENST00000551981 GIMAP6Q6P9H5 292 aa16.97■□□□□ 0.31
CHMP1A-210ENST00000551981 CPXCR1Q8N123 301 aa16.97■□□□□ 0.31
CHMP1A-210ENST00000551981 ANKRD35Q8N283 1001 aa16.97■□□□□ 0.31
CHMP1A-210ENST00000551981 TMEM199Q8N511 208 aa16.97■□□□□ 0.31
CHMP1A-210ENST00000551981 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.97■□□□□ 0.314e-9■■□□□ 12.9
CHMP1A-210ENST00000551981 ABHD16BQ9H3Z7 469 aa16.97■□□□□ 0.31
CHMP1A-210ENST00000551981 ZNF287Q9HBT7 754 aa16.97■□□□□ 0.31
CHMP1A-210ENST00000551981 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.97■□□□□ 0.31
CHMP1A-210ENST00000551981 RIPK3Q9Y572 518 aa16.97■□□□□ 0.31
CHMP1A-210ENST00000551981 MCM3APO60318 1980 aa16.97■□□□□ 0.31
CHMP1A-210ENST00000551981 A0A0U1RQG5 324 aaPredicted RBP16.96■□□□□ 0.31
CHMP1A-210ENST00000551981 MINDY4BA8MYZ0 360 aa16.96■□□□□ 0.31
CHMP1A-210ENST00000551981 TLR3O15455 904 aaKnown RBP16.96■□□□□ 0.31
CHMP1A-210ENST00000551981 ASGR1P07306 291 aa16.96■□□□□ 0.31
CHMP1A-210ENST00000551981 TJAP1Q5JTD0 557 aa16.96■□□□□ 0.31
CHMP1A-210ENST00000551981 KIFC2Q96AC6 838 aa16.96■□□□□ 0.31
CHMP1A-210ENST00000551981 STRBPQ96SI9 672 aaKnown RBP16.96■□□□□ 0.31
CHMP1A-210ENST00000551981 LRRCC1Q9C099 1032 aa16.96■□□□□ 0.31
CHMP1A-210ENST00000551981 FEM1BQ9UK73 627 aa16.96■□□□□ 0.31
CHMP1A-210ENST00000551981 COG6Q9Y2V7 657 aa16.96■□□□□ 0.31
CHMP1A-210ENST00000551981 MUC3AQ02505 3323 aa16.96■□□□□ 0.31
CHMP1A-210ENST00000551981 MYADML2A6NDP7 307 aa16.95■□□□□ 0.3
CHMP1A-210ENST00000551981 CDK7P50613 346 aa16.95■□□□□ 0.3
CHMP1A-210ENST00000551981 OAZ1P54368 228 aa16.95■□□□□ 0.3
CHMP1A-210ENST00000551981 GJA9P57773 515 aa16.95■□□□□ 0.3
CHMP1A-210ENST00000551981 CCDC144BQ3MJ40 725 aa16.95■□□□□ 0.3
CHMP1A-210ENST00000551981 GNASQ5JWF2 1037 aa16.95■□□□□ 0.3
CHMP1A-210ENST00000551981 PSRC1Q6PGN9 363 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-210ENST00000551981 CCDC129Q6ZRS4 1044 aa16.95■□□□□ 0.3
CHMP1A-210ENST00000551981 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.95■□□□□ 0.3
CHMP1A-210ENST00000551981 STK11IPQ8N1F8 1099 aa16.95■□□□□ 0.3
CHMP1A-210ENST00000551981 CHST13Q8NET6 341 aa16.95■□□□□ 0.3
CHMP1A-210ENST00000551981 GAS2L1Q99501 681 aaPredicted RBP16.95■□□□□ 0.3
CHMP1A-210ENST00000551981 UPF3AQ9H1J1 476 aaKnown RBP16.95■□□□□ 0.3
CHMP1A-210ENST00000551981 SLC38A10Q9HBR0 1119 aa16.95■□□□□ 0.3
CHMP1A-210ENST00000551981 RAVER2Q9HCJ3 691 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms