RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 ZRSR1Q15695 479 aaKnown RBP13.13□□□□□ -0.31
RAB5C-208ENST00000551338 IL17AQ16552 155 aa13.13□□□□□ -0.31
RAB5C-208ENST00000551338 CFAP100Q494V2 611 aa13.13□□□□□ -0.31
RAB5C-208ENST00000551338 GRIPAP1Q4V328 841 aa13.13□□□□□ -0.31
RAB5C-208ENST00000551338 ISM2Q6H9L7 571 aa13.13□□□□□ -0.31
RAB5C-208ENST00000551338 HOMER1Q86YM7 354 aa13.13□□□□□ -0.31
RAB5C-208ENST00000551338 ZNF713Q8N859 430 aaPredicted RBP13.13□□□□□ -0.31
RAB5C-208ENST00000551338 EPSTI1Q96J88 318 aa13.13□□□□□ -0.31
RAB5C-208ENST00000551338 ZNF830Q96NB3 372 aaPredicted RBP13.13□□□□□ -0.31
RAB5C-208ENST00000551338 TDRD3Q9H7E2 651 aaKnown RBP13.13□□□□□ -0.31
RAB5C-208ENST00000551338 TTC12Q9H892 705 aaPredicted RBP13.13□□□□□ -0.31
RAB5C-208ENST00000551338 CLIP2Q9UDT6 1046 aa13.13□□□□□ -0.31
RAB5C-208ENST00000551338 MAN1B1Q9UKM7 699 aa13.13□□□□□ -0.31
RAB5C-208ENST00000551338 VWA3AA6NCI4 1184 aa13.12□□□□□ -0.31
RAB5C-208ENST00000551338 ENTPD3O75355 529 aa13.12□□□□□ -0.31
RAB5C-208ENST00000551338 SARSP49591 514 aaKnown RBP13.12□□□□□ -0.31
RAB5C-208ENST00000551338 INF2Q27J81 1249 aa13.12□□□□□ -0.31
RAB5C-208ENST00000551338 SHROOM1Q2M3G4 852 aaPredicted RBP13.12□□□□□ -0.31
RAB5C-208ENST00000551338 NT5DC1Q5TFE4 455 aa13.12□□□□□ -0.31
RAB5C-208ENST00000551338 KRT25Q7Z3Z0 450 aa13.12□□□□□ -0.31
RAB5C-208ENST00000551338 SH3RF1Q7Z6J0 888 aa13.12□□□□□ -0.31
RAB5C-208ENST00000551338 GRAMD1CQ8IYS0 662 aa13.12□□□□□ -0.31
RAB5C-208ENST00000551338 RTKN2Q8IZC4 609 aa13.12□□□□□ -0.31
RAB5C-208ENST00000551338 PDILTQ8N807 584 aa13.12□□□□□ -0.31
RAB5C-208ENST00000551338 FBXO41Q8TF61 875 aa13.12□□□□□ -0.31
RAB5C-208ENST00000551338 CCDC12Q8WUD4 166 aaPredicted RBP13.12□□□□□ -0.31
RAB5C-208ENST00000551338 MRFAP1L1Q96HT8 127 aa13.12□□□□□ -0.31
RAB5C-208ENST00000551338 KCNF1Q9H3M0 494 aa13.12□□□□□ -0.31
RAB5C-208ENST00000551338 GPCPD1Q9NPB8 672 aa13.12□□□□□ -0.31
RAB5C-208ENST00000551338 SEC63Q9UGP8 760 aaKnown RBP13.12□□□□□ -0.31
RAB5C-208ENST00000551338 GOLGA6L6A8MZA4 724 aa13.11□□□□□ -0.31
RAB5C-208ENST00000551338 MPHOSPH10O00566 681 aaKnown RBP13.11□□□□□ -0.31
RAB5C-208ENST00000551338 IKBKBO14920 756 aa13.11□□□□□ -0.31
RAB5C-208ENST00000551338 TPM3P06753 285 aa13.11□□□□□ -0.31
RAB5C-208ENST00000551338 PTGS1P23219 599 aa13.11□□□□□ -0.31
RAB5C-208ENST00000551338 E2F4Q16254 413 aa13.11□□□□□ -0.31
RAB5C-208ENST00000551338 PPP4R3BQ5MIZ7 849 aa13.11□□□□□ -0.31
RAB5C-208ENST00000551338 ARL6IP4Q66PJ3 421 aaKnown RBP13.11□□□□□ -0.31
RAB5C-208ENST00000551338 KANK3Q6NY19 840 aa13.11□□□□□ -0.31
RAB5C-208ENST00000551338 TATDN1Q6P1N9 297 aa13.11□□□□□ -0.31
RAB5C-208ENST00000551338 RSBN1LQ6PCB5 846 aaPredicted RBP13.11□□□□□ -0.31
RAB5C-208ENST00000551338 DHX58Q96C10 678 aa13.11□□□□□ -0.31
RAB5C-208ENST00000551338 PRMT6Q96LA8 375 aaPredicted RBP13.11□□□□□ -0.31
RAB5C-208ENST00000551338 GMLQ99445 158 aa13.11□□□□□ -0.31
RAB5C-208ENST00000551338 VAT1LQ9HCJ6 419 aa13.11□□□□□ -0.31
RAB5C-208ENST00000551338 C6orf50Q9HD87 102 aa13.11□□□□□ -0.31
RAB5C-208ENST00000551338 PI4KBQ9UBF8 816 aa13.11□□□□□ -0.31
RAB5C-208ENST00000551338 SMCO2A6NFE2 343 aa13.1□□□□□ -0.31
RAB5C-208ENST00000551338 SMTNL1A8MU46 457 aa13.1□□□□□ -0.31
RAB5C-208ENST00000551338 PSMD14O00487 310 aa13.1□□□□□ -0.31
RAB5C-208ENST00000551338 BMP6P22004 513 aa13.1□□□□□ -0.31
RAB5C-208ENST00000551338 MORC3Q14149 939 aa13.1□□□□□ -0.31
RAB5C-208ENST00000551338 CCDC96Q2M329 555 aa13.1□□□□□ -0.31
RAB5C-208ENST00000551338 SOGA3Q5TF21 947 aa13.1□□□□□ -0.31
RAB5C-208ENST00000551338 TTBK2Q6IQ55 1244 aa13.1□□□□□ -0.31
RAB5C-208ENST00000551338 TRIML1Q8N9V2 468 aa13.1□□□□□ -0.31
RAB5C-208ENST00000551338 SMARCE1Q969G3 411 aa13.1□□□□□ -0.31
RAB5C-208ENST00000551338 MTMR8Q96EF0 704 aa13.1□□□□□ -0.31
RAB5C-208ENST00000551338 TMEM60Q9H2L4 133 aa13.1□□□□□ -0.31
RAB5C-208ENST00000551338 JMJD4Q9H9V9 463 aa13.1□□□□□ -0.31
RAB5C-208ENST00000551338 NYAP2Q9P242 653 aa13.1□□□□□ -0.31
RAB5C-208ENST00000551338 HOOK1Q9UJC3 728 aaKnown RBP13.1□□□□□ -0.31
RAB5C-208ENST00000551338 PPP1R11O60927 126 aaPredicted RBP13.09□□□□□ -0.31
RAB5C-208ENST00000551338 VIL1P09327 827 aaKnown RBP13.09□□□□□ -0.31
RAB5C-208ENST00000551338 SLFN14P0C7P3 912 aa13.09□□□□□ -0.31
RAB5C-208ENST00000551338 EEF2P13639 858 aaKnown RBP13.09□□□□□ -0.31
RAB5C-208ENST00000551338 GNA11P29992 359 aa13.09□□□□□ -0.31
RAB5C-208ENST00000551338 ATP2B2Q01814 1243 aa13.09□□□□□ -0.31
RAB5C-208ENST00000551338 NONOQ15233 471 aaKnown RBP eCLIP13.09□□□□□ -0.31
RAB5C-208ENST00000551338 CCDC144BQ3MJ40 725 aa13.09□□□□□ -0.31
RAB5C-208ENST00000551338 CERKLQ49MI3 558 aaPredicted RBP13.09□□□□□ -0.31
RAB5C-208ENST00000551338 GPATCH4Q5T3I0 446 aaKnown RBP13.09□□□□□ -0.31
RAB5C-208ENST00000551338 PPP1R18Q6NYC8 613 aa13.09□□□□□ -0.31
RAB5C-208ENST00000551338 ZSCAN29Q8IWY8 852 aaPredicted RBP13.09□□□□□ -0.31
RAB5C-208ENST00000551338 LARGE2Q8N3Y3 721 aa13.09□□□□□ -0.31
RAB5C-208ENST00000551338 SPATA20Q8TB22 786 aa13.09□□□□□ -0.31
RAB5C-208ENST00000551338 MKL1Q969V6 931 aa13.09□□□□□ -0.31
RAB5C-208ENST00000551338 COA7Q96BR5 231 aa13.09□□□□□ -0.31
RAB5C-208ENST00000551338 HSD3B7Q9H2F3 369 aa13.09□□□□□ -0.31
RAB5C-208ENST00000551338 ZNF277Q9NRM2 450 aaPredicted RBP13.09□□□□□ -0.31
RAB5C-208ENST00000551338 TMEM260Q9NX78 707 aa13.09□□□□□ -0.31
RAB5C-208ENST00000551338 NRBP1Q9UHY1 535 aa13.09□□□□□ -0.31
RAB5C-208ENST00000551338 CNTNAP1P78357 1384 aa13.08□□□□□ -0.31
RAB5C-208ENST00000551338 SMCHD1A6NHR9 2005 aa13.08□□□□□ -0.31
RAB5C-208ENST00000551338 RAD17O75943 681 aa13.08□□□□□ -0.32
RAB5C-208ENST00000551338 GDF11O95390 407 aa13.08□□□□□ -0.32
RAB5C-208ENST00000551338 LONP1P36776 959 aaKnown RBP13.08□□□□□ -0.32
RAB5C-208ENST00000551338 PRPHP41219 470 aa13.08□□□□□ -0.32
RAB5C-208ENST00000551338 DPYDQ12882 1025 aa13.08□□□□□ -0.32
RAB5C-208ENST00000551338 RRP1BQ14684 758 aaKnown RBP13.08□□□□□ -0.32
RAB5C-208ENST00000551338 SEPT2Q15019 361 aa13.08□□□□□ -0.32
RAB5C-208ENST00000551338 PDXDC2PQ6P474 469 aa13.08□□□□□ -0.32
RAB5C-208ENST00000551338 TMEM179Q6ZVK1 233 aa13.08□□□□□ -0.32
RAB5C-208ENST00000551338 CCDC186Q7Z3E2 898 aa13.08□□□□□ -0.32
RAB5C-208ENST00000551338 SIAH1Q8IUQ4 282 aa13.08□□□□□ -0.32
RAB5C-208ENST00000551338 DRC7Q8IY82 874 aa13.08□□□□□ -0.32
RAB5C-208ENST00000551338 ADGRF4Q8IZF3 695 aa13.08□□□□□ -0.32
RAB5C-208ENST00000551338 DCAF4Q8WV16 495 aa13.08□□□□□ -0.32
RAB5C-208ENST00000551338 PAGE5Q96GU1 130 aa13.08□□□□□ -0.32
RAB5C-208ENST00000551338 TRIM34Q9BYJ4 488 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms