RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 HSP90AB1P08238 724 aaKnown RBP7.51□□□□□ -1.21
SCAF11-213ENST00000550629 ATP2B2Q01814 1243 aa7.51□□□□□ -1.21
SCAF11-213ENST00000550629 LMOD3Q0VAK6 560 aa7.51□□□□□ -1.21
SCAF11-213ENST00000550629 DDB1Q16531 1140 aa7.51□□□□□ -1.21
SCAF11-213ENST00000550629 PHACTR3Q96KR7 559 aa7.51□□□□□ -1.21
SCAF11-213ENST00000550629 MFSD14AQ96MC6 490 aa7.51□□□□□ -1.21
SCAF11-213ENST00000550629 WDR18Q9BV38 432 aa7.51□□□□□ -1.21
SCAF11-213ENST00000550629 CCDC86Q9H6F5 360 aaKnown RBP7.51□□□□□ -1.21
SCAF11-213ENST00000550629 ACTL7BQ9Y614 415 aa7.51□□□□□ -1.21
SCAF11-213ENST00000550629 LRRC37A3O60309 1634 aa7.51□□□□□ -1.21
SCAF11-213ENST00000550629 BCL9O00512 1426 aa7.51□□□□□ -1.21
SCAF11-213ENST00000550629 LDHBP07195 334 aaKnown RBP7.5□□□□□ -1.21
SCAF11-213ENST00000550629 LIG1P18858 919 aa7.5□□□□□ -1.21
SCAF11-213ENST00000550629 PPP2R3AQ06190 1150 aa7.5□□□□□ -1.21
SCAF11-213ENST00000550629 NFKBIBQ15653 356 aa7.5□□□□□ -1.21
SCAF11-213ENST00000550629 NFE2L2Q16236 605 aa7.5□□□□□ -1.21
SCAF11-213ENST00000550629 CCDC27Q2M243 656 aa7.5□□□□□ -1.21
SCAF11-213ENST00000550629 MTHFSDQ2M296 383 aaKnown RBP7.5□□□□□ -1.21
SCAF11-213ENST00000550629 DYMQ7RTS9 669 aa7.5□□□□□ -1.21
SCAF11-213ENST00000550629 STK35Q8TDR2 534 aa7.5□□□□□ -1.21
SCAF11-213ENST00000550629 WDR89Q96FK6 387 aaPredicted RBP7.5□□□□□ -1.21
SCAF11-213ENST00000550629 ANGEL1Q9UNK9 670 aaKnown RBP7.5□□□□□ -1.21
SCAF11-213ENST00000550629 MAP3K5Q99683 1374 aa7.49□□□□□ -1.21
SCAF11-213ENST00000550629 FAM95CA0A1B0GW59 222 aa7.49□□□□□ -1.21
SCAF11-213ENST00000550629 GNAT3A8MTJ3 354 aa7.49□□□□□ -1.21
SCAF11-213ENST00000550629 GSTP1P09211 210 aaKnown RBP7.49□□□□□ -1.21
SCAF11-213ENST00000550629 PHKG2P15735 406 aa7.49□□□□□ -1.21
SCAF11-213ENST00000550629 GSTT1P30711 240 aa7.49□□□□□ -1.21
SCAF11-213ENST00000550629 TMPOP42166 694 aaKnown RBP7.49□□□□□ -1.21
SCAF11-213ENST00000550629 C1orf141Q5JVX7 400 aa7.49□□□□□ -1.21
SCAF11-213ENST00000550629 ZNF530Q6P9A1 599 aaPredicted RBP7.49□□□□□ -1.21
SCAF11-213ENST00000550629 CCDC146Q8IYE0 955 aa7.49□□□□□ -1.21
SCAF11-213ENST00000550629 IFNL2Q8IZJ0 200 aa7.49□□□□□ -1.21
SCAF11-213ENST00000550629 EZH1Q92800 747 aaPredicted RBP7.49□□□□□ -1.21
SCAF11-213ENST00000550629 SRCIN1Q9C0H9 1055 aa7.49□□□□□ -1.21
SCAF11-213ENST00000550629 ATG3Q9NT62 314 aa7.49□□□□□ -1.21
SCAF11-213ENST00000550629 PIM2Q9P1W9 311 aa7.49□□□□□ -1.21
SCAF11-213ENST00000550629 PPP1R9AQ9ULJ8 1098 aa7.49□□□□□ -1.21
SCAF11-213ENST00000550629 AP4E1Q9UPM8 1137 aa7.49□□□□□ -1.21
SCAF11-213ENST00000550629 APAF1O14727 1248 aa7.48□□□□□ -1.21
SCAF11-213ENST00000550629 GIPC1O14908 333 aa7.48□□□□□ -1.21
SCAF11-213ENST00000550629 RGS12O14924 1447 aa7.48□□□□□ -1.21
SCAF11-213ENST00000550629 CYP27B1O15528 508 aa7.48□□□□□ -1.21
SCAF11-213ENST00000550629 ZNF862O60290 1169 aa7.48□□□□□ -1.21
SCAF11-213ENST00000550629 CALD1Q05682 793 aaKnown RBP7.48□□□□□ -1.21
SCAF11-213ENST00000550629 PAOXQ6QHF9 649 aa7.48□□□□□ -1.21
SCAF11-213ENST00000550629 PDZD3Q86UT5 571 aa7.48□□□□□ -1.21
SCAF11-213ENST00000550629 SULF2Q8IWU5 870 aa7.48□□□□□ -1.21
SCAF11-213ENST00000550629 FBXL6Q8N531 539 aa7.48□□□□□ -1.21
SCAF11-213ENST00000550629 GSX1Q9H4S2 264 aaPredicted RBP7.48□□□□□ -1.21
SCAF11-213ENST00000550629 FAM105AQ9NUU6 356 aa7.48□□□□□ -1.21
SCAF11-213ENST00000550629 LEMD3Q9Y2U8 911 aa7.48□□□□□ -1.21
SCAF11-213ENST00000550629 SYNGAP1Q96PV0 1343 aa7.48□□□□□ -1.21
SCAF11-213ENST00000550629 ADAMTS7Q9UKP4 1686 aa7.47□□□□□ -1.21
SCAF11-213ENST00000550629 CEMIPQ8WUJ3 1361 aa7.47□□□□□ -1.21
SCAF11-213ENST00000550629 SHANK3Q9BYB0 1731 aa7.47□□□□□ -1.21
SCAF11-213ENST00000550629 ANKRD33BA6NCL7 494 aa7.47□□□□□ -1.21
SCAF11-213ENST00000550629 ERVV-2B6SEH9 535 aa7.47□□□□□ -1.21
SCAF11-213ENST00000550629 RAB6AP20340 208 aa7.47□□□□□ -1.21
SCAF11-213ENST00000550629 ASPAP45381 313 aa7.47□□□□□ -1.21
SCAF11-213ENST00000550629 RIPK4P57078 832 aa7.47□□□□□ -1.21
SCAF11-213ENST00000550629 TPTE2Q6XPS3 522 aa7.47□□□□□ -1.21
SCAF11-213ENST00000550629 KRT27Q7Z3Y8 459 aa7.47□□□□□ -1.21
SCAF11-213ENST00000550629 SHISA5Q8N114 240 aa7.47□□□□□ -1.21
SCAF11-213ENST00000550629 MARCH10Q8NA82 808 aaPredicted RBP7.47□□□□□ -1.21
SCAF11-213ENST00000550629 RTF1Q92541 710 aaKnown RBP7.47□□□□□ -1.21
SCAF11-213ENST00000550629 KCNB2Q92953 911 aa7.47□□□□□ -1.21
SCAF11-213ENST00000550629 NECAB3Q96P71 396 aaPredicted RBP7.47□□□□□ -1.21
SCAF11-213ENST00000550629 YIPF2Q9BWQ6 316 aa7.47□□□□□ -1.21
SCAF11-213ENST00000550629 OSBPL1AQ9BXW6 950 aa7.47□□□□□ -1.21
SCAF11-213ENST00000550629 C12orf49Q9H741 205 aa7.47□□□□□ -1.21
SCAF11-213ENST00000550629 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.46□□□□□ -1.22
SCAF11-213ENST00000550629 TMPRSS2O15393 492 aa7.46□□□□□ -1.22
SCAF11-213ENST00000550629 FBXO24O75426 580 aa7.46□□□□□ -1.22
SCAF11-213ENST00000550629 NFICP08651 508 aa7.46□□□□□ -1.22
SCAF11-213ENST00000550629 NME2P22392 152 aa7.46□□□□□ -1.22
SCAF11-213ENST00000550629 ARNTP27540 789 aa7.46□□□□□ -1.22
SCAF11-213ENST00000550629 HOXA10P31260 410 aaPredicted RBP7.46□□□□□ -1.22
SCAF11-213ENST00000550629 KIF4BQ2VIQ3 1234 aa7.46□□□□□ -1.22
SCAF11-213ENST00000550629 FAM196AQ6ZSG2 479 aa7.46□□□□□ -1.22
SCAF11-213ENST00000550629 KRTAP4-5Q9BYR2 181 aa7.46□□□□□ -1.22
SCAF11-213ENST00000550629 SEMA6CQ9H3T2 930 aa7.46□□□□□ -1.22
SCAF11-213ENST00000550629 ACSS3Q9H6R3 686 aa7.46□□□□□ -1.22
SCAF11-213ENST00000550629 KRT82Q9NSB4 513 aa7.46□□□□□ -1.22
SCAF11-213ENST00000550629 BABAM1Q9NWV8 329 aa7.46□□□□□ -1.22
SCAF11-213ENST00000550629 PPM1HQ9ULR3 514 aa7.46□□□□□ -1.22
SCAF11-213ENST00000550629 MRC1P22897 1456 aa7.46□□□□□ -1.22
SCAF11-213ENST00000550629 IL16Q14005 1332 aa7.46□□□□□ -1.22
SCAF11-213ENST00000550629 KDM6AO15550 1401 aaPredicted RBP7.45□□□□□ -1.22
SCAF11-213ENST00000550629 ENC1O14682 589 aa7.45□□□□□ -1.22
SCAF11-213ENST00000550629 RNMTO43148 476 aaKnown RBP7.45□□□□□ -1.22
SCAF11-213ENST00000550629 F13BP05160 661 aa7.45□□□□□ -1.22
SCAF11-213ENST00000550629 SLFN14P0C7P3 912 aa7.45□□□□□ -1.22
SCAF11-213ENST00000550629 COL19A1Q14993 1142 aa7.45□□□□□ -1.22
SCAF11-213ENST00000550629 WDR63Q8IWG1 891 aa7.45□□□□□ -1.22
SCAF11-213ENST00000550629 RNF19AQ9NV58 838 aa7.45□□□□□ -1.22
SCAF11-213ENST00000550629 CRIM1Q9NZV1 1036 aa7.45□□□□□ -1.22
SCAF11-213ENST00000550629 FAM8A1Q9UBU6 413 aa7.45□□□□□ -1.22
SCAF11-213ENST00000550629 PRKAG2Q9UGJ0 569 aa7.45□□□□□ -1.22
SCAF11-213ENST00000550629 ADGRE2Q9UHX3 823 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms