RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 ZNF444Q8N0Y2 327 aaPredicted RBP25.9■■□□□ 1.74
SMARCC2-210ENST00000550519 MTMR4Q9NYA4 1195 aa25.9■■□□□ 1.74
SMARCC2-210ENST00000550519 SYNPO2Q9UMS6 1093 aa25.9■■□□□ 1.74
SMARCC2-210ENST00000550519 SMCHD1A6NHR9 2005 aa25.9■■□□□ 1.74
SMARCC2-210ENST00000550519 LTBP2Q14767 1821 aa25.89■■□□□ 1.74
SMARCC2-210ENST00000550519 DNAJC25-GNG10A0A024R161 153 aa25.89■■□□□ 1.74
SMARCC2-210ENST00000550519 TRIM43BA6NCK2 446 aa25.89■■□□□ 1.74
SMARCC2-210ENST00000550519 DLL1O00548 723 aa25.89■■□□□ 1.74
SMARCC2-210ENST00000550519 PRDM1O75626 825 aa25.89■■□□□ 1.74
SMARCC2-210ENST00000550519 TLE2Q04725 743 aa25.89■■□□□ 1.74
SMARCC2-210ENST00000550519 SH3RF1Q7Z6J0 888 aa25.89■■□□□ 1.74
SMARCC2-210ENST00000550519 IFNL3Q8IZI9 196 aa25.89■■□□□ 1.74
SMARCC2-210ENST00000550519 BADQ92934 168 aa25.89■■□□□ 1.74
SMARCC2-210ENST00000550519 TRIM43Q96BQ3 446 aaPredicted RBP25.89■■□□□ 1.74
SMARCC2-210ENST00000550519 CEP95Q96GE4 821 aa25.89■■□□□ 1.74
SMARCC2-210ENST00000550519 CNPY2Q9Y2B0 182 aa25.89■■□□□ 1.74
SMARCC2-210ENST00000550519 TTC41PQ6P2S7 1318 aa25.88■■□□□ 1.73
SMARCC2-210ENST00000550519 APPP05067 770 aa25.88■■□□□ 1.73
SMARCC2-210ENST00000550519 SHHQ15465 462 aa25.88■■□□□ 1.73
SMARCC2-210ENST00000550519 LRRFIP1Q32MZ4 808 aaKnown RBP25.88■■□□□ 1.73
SMARCC2-210ENST00000550519 MAMDC4Q6UXC1 1216 aa25.88■■□□□ 1.73
SMARCC2-210ENST00000550519 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.88■■□□□ 1.73
SMARCC2-210ENST00000550519 SYNGAP1Q96PV0 1343 aa25.88■■□□□ 1.73
SMARCC2-210ENST00000550519 ZBED4O75132 1171 aa25.87■■□□□ 1.73
SMARCC2-210ENST00000550519 ADAMTS4O75173 837 aa25.87■■□□□ 1.73
SMARCC2-210ENST00000550519 SNAI1O95863 264 aaPredicted RBP25.87■■□□□ 1.73
SMARCC2-210ENST00000550519 PI4K2BQ8TCG2 481 aa25.87■■□□□ 1.73
SMARCC2-210ENST00000550519 DDX11Q96FC9 970 aa25.87■■□□□ 1.73
SMARCC2-210ENST00000550519 SEC62Q99442 399 aaKnown RBP25.87■■□□□ 1.73
SMARCC2-210ENST00000550519 SLC38A10Q9HBR0 1119 aa25.87■■□□□ 1.73
SMARCC2-210ENST00000550519 A0A1W2PQ45 241 aaPredicted RBP25.86■■□□□ 1.73
SMARCC2-210ENST00000550519 A0A1W2PQY0 241 aa25.86■■□□□ 1.73
SMARCC2-210ENST00000550519 TTLL1O95922 423 aa25.86■■□□□ 1.73
SMARCC2-210ENST00000550519 C9orf50Q5SZB4 431 aa25.86■■□□□ 1.73
SMARCC2-210ENST00000550519 CPXCR1Q8N123 301 aa25.86■■□□□ 1.73
SMARCC2-210ENST00000550519 GMCL1P1Q8NEA9 526 aa25.86■■□□□ 1.73
SMARCC2-210ENST00000550519 LENG1Q96BZ8 264 aaPredicted RBP25.86■■□□□ 1.73
SMARCC2-210ENST00000550519 FEM1BQ9UK73 627 aa25.86■■□□□ 1.73
SMARCC2-210ENST00000550519 TACC3Q9Y6A5 838 aa25.86■■□□□ 1.73
SMARCC2-210ENST00000550519 PLXNA1Q9UIW2 1896 aa25.85■■□□□ 1.73
SMARCC2-210ENST00000550519 PLIN4Q96Q06 1357 aa25.85■■□□□ 1.73
SMARCC2-210ENST00000550519 ERC2O15083 957 aa25.85■■□□□ 1.73
SMARCC2-210ENST00000550519 ZNF467Q7Z7K2 595 aaPredicted RBP25.85■■□□□ 1.73
SMARCC2-210ENST00000550519 NEDD1Q8NHV4 660 aa25.85■■□□□ 1.73
SMARCC2-210ENST00000550519 KIFC2Q96AC6 838 aa25.85■■□□□ 1.73
SMARCC2-210ENST00000550519 GUCD1Q96NT3 240 aa25.85■■□□□ 1.73
SMARCC2-210ENST00000550519 TSEN34Q9BSV6 310 aaKnown RBP25.85■■□□□ 1.73
SMARCC2-210ENST00000550519 NACAP1Q9BZK3 213 aa25.85■■□□□ 1.73
SMARCC2-210ENST00000550519 RAVER2Q9HCJ3 691 aaKnown RBP25.85■■□□□ 1.73
SMARCC2-210ENST00000550519 FAM184BQ9ULE4 1060 aa25.85■■□□□ 1.73
SMARCC2-210ENST00000550519 PCDHB15Q9Y5E8 787 aa25.85■■□□□ 1.73
SMARCC2-210ENST00000550519 OTUD7AQ8TE49 926 aaPredicted RBP25.84■■□□□ 1.73
SMARCC2-210ENST00000550519 CTDP1Q9Y5B0 961 aaPredicted RBP25.84■■□□□ 1.73
SMARCC2-210ENST00000550519 CLTBP09497 229 aa25.83■■□□□ 1.73
SMARCC2-210ENST00000550519 ITGB8P26012 769 aa25.83■■□□□ 1.73
SMARCC2-210ENST00000550519 SLC4A3P48751 1232 aa25.83■■□□□ 1.73
SMARCC2-210ENST00000550519 OAZ1P54368 228 aa25.83■■□□□ 1.73
SMARCC2-210ENST00000550519 PDE4BQ07343 736 aa25.83■■□□□ 1.73
SMARCC2-210ENST00000550519 ZMYM1Q5SVZ6 1142 aa25.83■■□□□ 1.73
SMARCC2-210ENST00000550519 LRRC47Q8N1G4 583 aaKnown RBP25.83■■□□□ 1.73
SMARCC2-210ENST00000550519 KLHDC9Q8NEP7 349 aa25.83■■□□□ 1.73
SMARCC2-210ENST00000550519 FBXO40Q9UH90 709 aa25.83■■□□□ 1.73
SMARCC2-210ENST00000550519 SYNRGQ9UMZ2 1314 aa25.83■■□□□ 1.73
SMARCC2-210ENST00000550519 CUL9Q8IWT3 2517 aa25.82■■□□□ 1.72
SMARCC2-210ENST00000550519 KIAA0355O15063 1070 aa25.82■■□□□ 1.72
SMARCC2-210ENST00000550519 TSPY3P0CV98 308 aa25.82■■□□□ 1.72
SMARCC2-210ENST00000550519 TSPY8P0CW00 308 aa25.82■■□□□ 1.72
SMARCC2-210ENST00000550519 ACLYP53396 1101 aa25.82■■□□□ 1.72
SMARCC2-210ENST00000550519 SLFN13Q68D06 897 aa25.82■■□□□ 1.72
SMARCC2-210ENST00000550519 CCSAPQ6IQ19 270 aaPredicted RBP25.82■■□□□ 1.72
SMARCC2-210ENST00000550519 CHST13Q8NET6 341 aa25.82■■□□□ 1.72
SMARCC2-210ENST00000550519 FGD4Q96M96 766 aa25.82■■□□□ 1.72
SMARCC2-210ENST00000550519 FSD1Q9BTV5 496 aa25.82■■□□□ 1.72
SMARCC2-210ENST00000550519 ZHX1Q9UKY1 873 aaPredicted RBP25.82■■□□□ 1.72
SMARCC2-210ENST00000550519 BMP3P12645 472 aa25.81■■□□□ 1.72
SMARCC2-210ENST00000550519 PPARAQ07869 468 aa25.81■■□□□ 1.72
SMARCC2-210ENST00000550519 ZNF697Q5TEC3 545 aa25.81■■□□□ 1.72
SMARCC2-210ENST00000550519 ANKRD33Q7Z3H0 272 aa25.81■■□□□ 1.72
SMARCC2-210ENST00000550519 ANKRD35Q8N283 1001 aa25.81■■□□□ 1.72
SMARCC2-210ENST00000550519 FAM161BQ96MY7 647 aa25.81■■□□□ 1.72
SMARCC2-210ENST00000550519 NAPBQ9H115 298 aa25.81■■□□□ 1.72
SMARCC2-210ENST00000550519 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.81■■□□□ 1.72
SMARCC2-210ENST00000550519 MOXD2PA6NHM9 499 aa25.8■■□□□ 1.72
SMARCC2-210ENST00000550519 PQBP1O60828 265 aaKnown RBP25.8■■□□□ 1.72
SMARCC2-210ENST00000550519 DUSP11O75319 330 aaKnown RBP25.8■■□□□ 1.72
SMARCC2-210ENST00000550519 SLC3A2P08195 630 aaKnown RBP25.8■■□□□ 1.72
SMARCC2-210ENST00000550519 FDX1P10109 184 aa25.8■■□□□ 1.72
SMARCC2-210ENST00000550519 TFAP4Q01664 338 aa25.8■■□□□ 1.72
SMARCC2-210ENST00000550519 ACVR2BQ13705 512 aa25.8■■□□□ 1.72
SMARCC2-210ENST00000550519 NUP133Q8WUM0 1156 aa25.8■■□□□ 1.72
SMARCC2-210ENST00000550519 TOX2Q96NM4 488 aa25.8■■□□□ 1.72
SMARCC2-210ENST00000550519 MYH4Q9Y623 1939 aa25.79■■□□□ 1.72
SMARCC2-210ENST00000550519 SMAD3P84022 425 aaKnown RBP25.79■■□□□ 1.72
SMARCC2-210ENST00000550519 KCNA10Q16322 511 aa25.79■■□□□ 1.72
SMARCC2-210ENST00000550519 ABHD16BQ9H3Z7 469 aa25.79■■□□□ 1.72
SMARCC2-210ENST00000550519 STARD7Q9NQZ5 370 aa25.79■■□□□ 1.72
SMARCC2-210ENST00000550519 TMEM232C9JQI7 657 aa25.78■■□□□ 1.72
SMARCC2-210ENST00000550519 FOXP2O15409 715 aa25.78■■□□□ 1.72
SMARCC2-210ENST00000550519 RAG1P15918 1043 aa25.78■■□□□ 1.72
SMARCC2-210ENST00000550519 MX1P20591 662 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms