RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 VEGFAP15692 232 aaPredicted RBP13.1□□□□□ -0.31
VDR-206ENST00000549336 SLC16A2P36021 539 aa13.1□□□□□ -0.31
VDR-206ENST00000549336 GSDMDP57764 484 aa13.1□□□□□ -0.31
VDR-206ENST00000549336 TSGA10IPQ3SY00 556 aa13.1□□□□□ -0.31
VDR-206ENST00000549336 TBC1D10CQ8IV04 446 aa13.1□□□□□ -0.31
VDR-206ENST00000549336 FMNL3Q8IVF7 1028 aa13.1□□□□□ -0.31
VDR-206ENST00000549336 LEO1Q8WVC0 666 aaPredicted RBP13.1□□□□□ -0.31
VDR-206ENST00000549336 CEP95Q96GE4 821 aa13.1□□□□□ -0.31
VDR-206ENST00000549336 JPH2Q9BR39 696 aaPredicted RBP13.1□□□□□ -0.31
VDR-206ENST00000549336 AP5M1Q9H0R1 490 aa13.1□□□□□ -0.31
VDR-206ENST00000549336 BTBD18B2RXH4 712 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 BRD1O95696 1058 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 PTF1AQ7RTS3 328 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 GTF3C2Q8WUA4 911 aaPredicted RBP13.09□□□□□ -0.31
VDR-206ENST00000549336 ZDHHC15Q96MV8 337 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 NUP88Q99567 741 aaPredicted RBP13.09□□□□□ -0.31
VDR-206ENST00000549336 NRBP2Q9NSY0 501 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 MRC1P22897 1456 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 USP17L15C9J2P7 530 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 USP17L13C9JLJ4 530 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 USP17L11C9JVI0 530 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 USP17L18D6R9N7 530 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 USP17L22D6RA61 530 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 USP17L17D6RBQ6 530 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 USP17L19D6RCP7 530 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 USP17L20D6RJB6 530 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 F5H6K3 240 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 HOXD10P28358 340 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 CNGA1P29973 690 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 FKBP1AP62942 108 aaKnown RBP13.09□□□□□ -0.31
VDR-206ENST00000549336 KLRC3Q07444 240 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 USP17L24Q0WX57 530 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 AP3B2Q13367 1082 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 KIAA1328Q86T90 577 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 NSUN7Q8NE18 718 aaKnown RBP13.09□□□□□ -0.31
VDR-206ENST00000549336 FAM200AQ8TCP9 573 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 DEFB129Q9H1M3 183 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 FAM205AQ6ZU69 1335 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 PPP1R18Q6NYC8 613 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 HACE1Q8IYU2 909 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 FAM177A1Q8N128 213 aaPredicted RBP13.09□□□□□ -0.31
VDR-206ENST00000549336 OTUD5Q96G74 571 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 A0A1B0GVL5 298 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 CCDC169A6NNP5 214 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 ZBTB5O15062 677 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 CCND2P30279 289 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 CXCL9Q07325 125 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 TMTC3Q6ZXV5 915 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 MRVI1Q9Y6F6 885 aa13.09□□□□□ -0.31
VDR-206ENST00000549336 ARHGAP29Q52LW3 1261 aa13.08□□□□□ -0.31
VDR-206ENST00000549336 ISM2Q6H9L7 571 aa13.08□□□□□ -0.31
VDR-206ENST00000549336 ILDR1Q86SU0 546 aaPredicted RBP13.08□□□□□ -0.31
VDR-206ENST00000549336 EXOC8Q8IYI6 725 aa13.08□□□□□ -0.31
VDR-206ENST00000549336 TBC1D5Q92609 795 aa13.08□□□□□ -0.31
VDR-206ENST00000549336 ATP6V0A1Q93050 837 aa13.08□□□□□ -0.31
VDR-206ENST00000549336 PLIN2Q99541 437 aa13.08□□□□□ -0.31
VDR-206ENST00000549336 NYAP2Q9P242 653 aa13.08□□□□□ -0.31
VDR-206ENST00000549336 SALL1Q9NSC2 1324 aa13.08□□□□□ -0.32
VDR-206ENST00000549336 ZEB2O60315 1214 aa13.08□□□□□ -0.32
VDR-206ENST00000549336 ANKRD13AQ8IZ07 590 aa13.08□□□□□ -0.32
VDR-206ENST00000549336 SLC44A5Q8NCS7 719 aa13.08□□□□□ -0.32
VDR-206ENST00000549336 PKNOX2Q96KN3 472 aa13.08□□□□□ -0.32
VDR-206ENST00000549336 SPAG5Q96R06 1193 aa13.08□□□□□ -0.32
VDR-206ENST00000549336 PRM3Q9NNZ6 103 aa13.08□□□□□ -0.32
VDR-206ENST00000549336 FRMD4BQ9Y2L6 1034 aa13.08□□□□□ -0.32
VDR-206ENST00000549336 TDRD12Q587J7 1177 aaKnown RBP13.08□□□□□ -0.32
VDR-206ENST00000549336 LRSAM1Q6UWE0 723 aa13.08□□□□□ -0.32
VDR-206ENST00000549336 MB21D2Q8IYB1 491 aaPredicted RBP13.08□□□□□ -0.32
VDR-206ENST00000549336 DPF2Q92785 391 aa13.08□□□□□ -0.32
VDR-206ENST00000549336 COA7Q96BR5 231 aa13.08□□□□□ -0.32
VDR-206ENST00000549336 CAMKK2Q96RR4 588 aa13.08□□□□□ -0.32
VDR-206ENST00000549336 MAP7D2Q96T17 732 aa13.08□□□□□ -0.32
VDR-206ENST00000549336 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.08□□□□□ -0.32
VDR-206ENST00000549336 PARP4Q9UKK3 1724 aaKnown RBP13.08□□□□□ -0.32
VDR-206ENST00000549336 SPDYE4A6NLX3 237 aa13.08□□□□□ -0.32
VDR-206ENST00000549336 ABCB11O95342 1321 aa13.08□□□□□ -0.32
VDR-206ENST00000549336 TMOD1P28289 359 aa13.08□□□□□ -0.32
VDR-206ENST00000549336 C15orf52Q6ZUT6 534 aaKnown RBP13.08□□□□□ -0.32
VDR-206ENST00000549336 ENAHQ8N8S7 591 aaPredicted RBP13.08□□□□□ -0.32
VDR-206ENST00000549336 FHDC1Q9C0D6 1143 aaPredicted RBP13.08□□□□□ -0.32
VDR-206ENST00000549336 POLR2DO15514 142 aaKnown RBP13.07□□□□□ -0.32
VDR-206ENST00000549336 CTNND1O60716 968 aaKnown RBP13.07□□□□□ -0.32
VDR-206ENST00000549336 LONP1P36776 959 aaKnown RBP13.07□□□□□ -0.32
VDR-206ENST00000549336 GPS2Q13227 327 aa13.07□□□□□ -0.32
VDR-206ENST00000549336 FAM83BQ5T0W9 1011 aa13.07□□□□□ -0.32
VDR-206ENST00000549336 ADALQ6DHV7 355 aa13.07□□□□□ -0.32
VDR-206ENST00000549336 SGMS1Q86VZ5 419 aa13.07□□□□□ -0.32
VDR-206ENST00000549336 TPH2Q8IWU9 490 aa13.07□□□□□ -0.32
VDR-206ENST00000549336 GPC2Q8N158 579 aa13.07□□□□□ -0.32
VDR-206ENST00000549336 AK8Q96MA6 479 aa13.07□□□□□ -0.32
VDR-206ENST00000549336 BCL2L12Q9HB09 334 aa13.07□□□□□ -0.32
VDR-206ENST00000549336 NEDD4P46934 1319 aa13.07□□□□□ -0.32
VDR-206ENST00000549336 FAM196BA6NMK8 535 aa13.07□□□□□ -0.32
VDR-206ENST00000549336 ZSCAN12O43309 604 aa13.07□□□□□ -0.32
VDR-206ENST00000549336 SNAPC2Q13487 334 aa13.07□□□□□ -0.32
VDR-206ENST00000549336 CUL4AQ13619 759 aa13.07□□□□□ -0.32
VDR-206ENST00000549336 STK36Q9NRP7 1315 aa13.06□□□□□ -0.32
VDR-206ENST00000549336 WDR46O15213 610 aaKnown RBP13.06□□□□□ -0.32
VDR-206ENST00000549336 USO1O60763 962 aaKnown RBP13.06□□□□□ -0.32
VDR-206ENST00000549336 USP8P40818 1118 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms