RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 NUP88Q99567 741 aaPredicted RBP11.26□□□□□ -0.61
USP15-208ENST00000548524 APBA2Q99767 749 aa11.26□□□□□ -0.61
USP15-208ENST00000548524 MOV10L1Q9BXT6 1211 aaKnown RBP11.26□□□□□ -0.61
USP15-208ENST00000548524 INCENPQ9NQS7 918 aa11.26□□□□□ -0.61
USP15-208ENST00000548524 FBXO28Q9NVF7 368 aa11.26□□□□□ -0.61
USP15-208ENST00000548524 PPP1R9AQ9ULJ8 1098 aa11.26□□□□□ -0.61
USP15-208ENST00000548524 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.26□□□□□ -0.61
USP15-208ENST00000548524 CTDP1Q9Y5B0 961 aaPredicted RBP11.26□□□□□ -0.61
USP15-208ENST00000548524 MYH7P12883 1935 aa11.26□□□□□ -0.61
USP15-208ENST00000548524 SLC15A5A6NIM6 579 aa11.25□□□□□ -0.61
USP15-208ENST00000548524 XRCC5P13010 732 aaKnown RBP11.25□□□□□ -0.61
USP15-208ENST00000548524 ERCC3P19447 782 aa11.25□□□□□ -0.61
USP15-208ENST00000548524 GJA8P48165 433 aa11.25□□□□□ -0.61
USP15-208ENST00000548524 HAND2P61296 217 aa11.25□□□□□ -0.61
USP15-208ENST00000548524 MAP2K5Q13163 448 aa11.25□□□□□ -0.61
USP15-208ENST00000548524 DSG2Q14126 1118 aa11.25□□□□□ -0.61
USP15-208ENST00000548524 MFSD10Q14728 455 aa11.25□□□□□ -0.61
USP15-208ENST00000548524 SLFN13Q68D06 897 aa11.25□□□□□ -0.61
USP15-208ENST00000548524 SHCBP1Q8NEM2 672 aa11.25□□□□□ -0.61
USP15-208ENST00000548524 MKL1Q969V6 931 aa11.25□□□□□ -0.61
USP15-208ENST00000548524 SLF1Q9BQI6 1058 aa11.25□□□□□ -0.61
USP15-208ENST00000548524 SYNPO2Q9UMS6 1093 aa11.25□□□□□ -0.61
USP15-208ENST00000548524 STX8Q9UNK0 236 aa11.25□□□□□ -0.61
USP15-208ENST00000548524 PLIN4Q96Q06 1357 aa11.25□□□□□ -0.61
USP15-208ENST00000548524 BAZ2AQ9UIF9 1905 aaKnown RBP11.25□□□□□ -0.61
USP15-208ENST00000548524 VWA5AO00534 786 aa11.24□□□□□ -0.61
USP15-208ENST00000548524 ZNF213O14771 459 aa11.24□□□□□ -0.61
USP15-208ENST00000548524 ORC4O43929 436 aa11.24□□□□□ -0.61
USP15-208ENST00000548524 SLC25A27O95847 323 aa11.24□□□□□ -0.61
USP15-208ENST00000548524 TFRCP02786 760 aaKnown RBP11.24□□□□□ -0.61
USP15-208ENST00000548524 GSPT1P15170 499 aaKnown RBP11.24□□□□□ -0.61
USP15-208ENST00000548524 TRIM32Q13049 653 aa11.24□□□□□ -0.61
USP15-208ENST00000548524 GRB14Q14449 540 aa11.24□□□□□ -0.61
USP15-208ENST00000548524 TMEM132BQ14DG7 1078 aa11.24□□□□□ -0.61
USP15-208ENST00000548524 DPP9Q86TI2 863 aa11.24□□□□□ -0.61
USP15-208ENST00000548524 GMCL1P1Q8NEA9 526 aa11.24□□□□□ -0.61
USP15-208ENST00000548524 U2AF1L4Q8WU68 220 aaKnown RBP11.24□□□□□ -0.61
USP15-208ENST00000548524 TRIB2Q92519 343 aa11.24□□□□□ -0.61
USP15-208ENST00000548524 USP6NLQ92738 828 aa11.24□□□□□ -0.61
USP15-208ENST00000548524 DEFB118Q96PH6 123 aa11.24□□□□□ -0.61
USP15-208ENST00000548524 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.24□□□□□ -0.61
USP15-208ENST00000548524 RNF41Q9H4P4 317 aaPredicted RBP11.24□□□□□ -0.61
USP15-208ENST00000548524 MROH8Q9H579 483 aa11.24□□□□□ -0.61
USP15-208ENST00000548524 HMX1Q9NP08 348 aaPredicted RBP11.24□□□□□ -0.61
USP15-208ENST00000548524 ZMYM6O95789 1325 aa11.24□□□□□ -0.61
USP15-208ENST00000548524 STRNO43815 780 aa11.23□□□□□ -0.61
USP15-208ENST00000548524 ZBED4O75132 1171 aa11.23□□□□□ -0.61
USP15-208ENST00000548524 SGPL1O95470 568 aa11.23□□□□□ -0.61
USP15-208ENST00000548524 PCP11498 1178 aaKnown RBP11.23□□□□□ -0.61
USP15-208ENST00000548524 BMP3P12645 472 aa11.23□□□□□ -0.61
USP15-208ENST00000548524 STAT3P40763 770 aa11.23□□□□□ -0.61
USP15-208ENST00000548524 FOXK1P85037 733 aa11.23□□□□□ -0.61
USP15-208ENST00000548524 IKQ13123 557 aaPredicted RBP11.23□□□□□ -0.61
USP15-208ENST00000548524 CCL14Q16627 93 aa11.23□□□□□ -0.61
USP15-208ENST00000548524 PPP1R15BQ5SWA1 713 aa11.23□□□□□ -0.61
USP15-208ENST00000548524 MFSD14CQ5VZR4 134 aa11.23□□□□□ -0.61
USP15-208ENST00000548524 MFSD6Q6ZSS7 791 aa11.23□□□□□ -0.61
USP15-208ENST00000548524 PRPF38AQ8NAV1 312 aaKnown RBP11.23□□□□□ -0.61
USP15-208ENST00000548524 RUFY2Q8WXA3 655 aa11.23□□□□□ -0.61
USP15-208ENST00000548524 KIFC2Q96AC6 838 aa11.23□□□□□ -0.61
USP15-208ENST00000548524 CHMP4CQ96CF2 233 aa11.23□□□□□ -0.61
USP15-208ENST00000548524 SHISA4Q96DD7 197 aa11.23□□□□□ -0.61
USP15-208ENST00000548524 SLC5A4Q9NY91 659 aa11.23□□□□□ -0.61
USP15-208ENST00000548524 FEM1BQ9UK73 627 aa11.23□□□□□ -0.61
USP15-208ENST00000548524 MTMR7Q9Y216 660 aa11.23□□□□□ -0.61
USP15-208ENST00000548524 TACC3Q9Y6A5 838 aa11.23□□□□□ -0.61
USP15-208ENST00000548524 RPTORQ8N122 1335 aa11.23□□□□□ -0.61
USP15-208ENST00000548524 NMT2O60551 498 aa11.22□□□□□ -0.61
USP15-208ENST00000548524 FGRP09769 529 aa11.22□□□□□ -0.61
USP15-208ENST00000548524 FCER1AP12319 257 aa11.22□□□□□ -0.61
USP15-208ENST00000548524 CAPN2P17655 700 aa11.22□□□□□ -0.61
USP15-208ENST00000548524 MCCP23508 829 aa11.22□□□□□ -0.61
USP15-208ENST00000548524 ADORA2AP29274 412 aa11.22□□□□□ -0.61
USP15-208ENST00000548524 COPB2P35606 906 aa11.22□□□□□ -0.61
USP15-208ENST00000548524 SLC1A4P43007 532 aa11.22□□□□□ -0.61
USP15-208ENST00000548524 SLC4A3P48751 1232 aa11.22□□□□□ -0.61
USP15-208ENST00000548524 AKNAD1Q5T1N1 836 aa11.22□□□□□ -0.61
USP15-208ENST00000548524 RIOX2Q8IUF8 465 aa11.22□□□□□ -0.61
USP15-208ENST00000548524 NPLOC4Q8TAT6 608 aa11.22□□□□□ -0.61
USP15-208ENST00000548524 STAG1Q8WVM7 1258 aa11.22□□□□□ -0.61
USP15-208ENST00000548524 MMP19Q99542 508 aa11.22□□□□□ -0.61
USP15-208ENST00000548524 DSCC1Q9BVC3 393 aa11.22□□□□□ -0.61
USP15-208ENST00000548524 PAK6Q9NQU5 681 aaPredicted RBP11.22□□□□□ -0.61
USP15-208ENST00000548524 IL17RBQ9NRM6 502 aa11.22□□□□□ -0.61
USP15-208ENST00000548524 CTNNA3Q9UI47 895 aa11.22□□□□□ -0.61
USP15-208ENST00000548524 ADAMTS5Q9UNA0 930 aa11.22□□□□□ -0.61
USP15-208ENST00000548524 RAD50Q92878 1312 aa11.21□□□□□ -0.61
USP15-208ENST00000548524 TMEM232C9JQI7 657 aa11.21□□□□□ -0.61
USP15-208ENST00000548524 FARP2O94887 1054 aaPredicted RBP11.21□□□□□ -0.61
USP15-208ENST00000548524 HOXC6P09630 235 aa11.21□□□□□ -0.61
USP15-208ENST00000548524 CACNB2Q08289 660 aaPredicted RBP11.21□□□□□ -0.61
USP15-208ENST00000548524 IMMTQ16891 758 aaKnown RBP11.21□□□□□ -0.61
USP15-208ENST00000548524 MAP3K21Q5TCX8 1036 aa11.21□□□□□ -0.61
USP15-208ENST00000548524 SNRNP48Q6IEG0 339 aaKnown RBP11.21□□□□□ -0.61
USP15-208ENST00000548524 FAM160B2Q86V87 743 aa11.21□□□□□ -0.61
USP15-208ENST00000548524 TBC1D10CQ8IV04 446 aa11.21□□□□□ -0.61
USP15-208ENST00000548524 ABRAQ8N0Z2 381 aa11.21□□□□□ -0.61
USP15-208ENST00000548524 CPXCR1Q8N123 301 aa11.21□□□□□ -0.61
USP15-208ENST00000548524 REPS2Q8NFH8 660 aa11.21□□□□□ -0.61
USP15-208ENST00000548524 CHURC1Q8WUH1 139 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms