RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 TINF2Q9BSI4 451 aa17.09■□□□□ 0.33
COL2A1-209ENST00000546974 HELLSQ9NRZ9 838 aa17.09■□□□□ 0.33
COL2A1-209ENST00000546974 MAGEA10P43363 369 aaPredicted RBP17.08■□□□□ 0.32
COL2A1-209ENST00000546974 GJC2Q5T442 439 aaPredicted RBP17.08■□□□□ 0.32
COL2A1-209ENST00000546974 SLFN13Q68D06 897 aa17.08■□□□□ 0.32
COL2A1-209ENST00000546974 LRRC47Q8N1G4 583 aaKnown RBP17.08■□□□□ 0.32
COL2A1-209ENST00000546974 YTHDC1Q96MU7 727 aaKnown RBP17.08■□□□□ 0.32
COL2A1-209ENST00000546974 SLC38A10Q9HBR0 1119 aa17.08■□□□□ 0.32
COL2A1-209ENST00000546974 ANAPC4Q9UJX5 808 aa17.08■□□□□ 0.32
COL2A1-209ENST00000546974 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.08■□□□□ 0.32
COL2A1-209ENST00000546974 CTDP1Q9Y5B0 961 aaPredicted RBP17.08■□□□□ 0.32
COL2A1-209ENST00000546974 KBTBD13C9JR72 458 aa17.07■□□□□ 0.32
COL2A1-209ENST00000546974 FDX1P10109 184 aa17.07■□□□□ 0.32
COL2A1-209ENST00000546974 BMP3P12645 472 aa17.07■□□□□ 0.32
COL2A1-209ENST00000546974 OAZ1P54368 228 aa17.07■□□□□ 0.32
COL2A1-209ENST00000546974 ALX1Q15699 326 aa17.07■□□□□ 0.32
COL2A1-209ENST00000546974 ANO1Q5XXA6 986 aa17.07■□□□□ 0.32
COL2A1-209ENST00000546974 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.07■□□□□ 0.32
COL2A1-209ENST00000546974 MSL3Q8N5Y2 521 aaKnown RBP17.07■□□□□ 0.32
COL2A1-209ENST00000546974 KIFC2Q96AC6 838 aa17.07■□□□□ 0.32
COL2A1-209ENST00000546974 RIPK3Q9Y572 518 aa17.07■□□□□ 0.32
COL2A1-209ENST00000546974 CTDSPL2Q05D32 466 aa17.06■□□□□ 0.32
COL2A1-209ENST00000546974 MCMDC2Q4G0Z9 681 aa17.06■□□□□ 0.32
COL2A1-209ENST00000546974 VPS53Q5VIR6 699 aa17.06■□□□□ 0.32
COL2A1-209ENST00000546974 SMC5Q8IY18 1101 aa17.06■□□□□ 0.32
COL2A1-209ENST00000546974 CPXCR1Q8N123 301 aa17.06■□□□□ 0.32
COL2A1-209ENST00000546974 RWDD1Q9H446 243 aaPredicted RBP17.06■□□□□ 0.32
COL2A1-209ENST00000546974 LAMA2P24043 3122 aaKnown RBP17.06■□□□□ 0.32
COL2A1-209ENST00000546974 DNAJC25-GNG10A0A024R161 153 aa17.05■□□□□ 0.32
COL2A1-209ENST00000546974 TSPY2A6NKD2 308 aa17.05■□□□□ 0.32
COL2A1-209ENST00000546974 STAT2P52630 851 aa17.05■□□□□ 0.32
COL2A1-209ENST00000546974 ATN1P54259 1190 aaPredicted RBP17.05■□□□□ 0.32
COL2A1-209ENST00000546974 LRRC41Q15345 812 aa17.05■□□□□ 0.32
COL2A1-209ENST00000546974 CHURC1Q8WUH1 139 aa17.05■□□□□ 0.32
COL2A1-209ENST00000546974 DDX11Q96FC9 970 aa17.05■□□□□ 0.32
COL2A1-209ENST00000546974 GMCL1Q96IK5 515 aa17.05■□□□□ 0.32
COL2A1-209ENST00000546974 LNPKQ9C0E8 428 aa17.05■□□□□ 0.32
COL2A1-209ENST00000546974 RAVER2Q9HCJ3 691 aaKnown RBP17.05■□□□□ 0.32
COL2A1-209ENST00000546974 FBXO40Q9UH90 709 aa17.05■□□□□ 0.32
COL2A1-209ENST00000546974 SYNGAP1Q96PV0 1343 aa17.04■□□□□ 0.32
COL2A1-209ENST00000546974 TMEM232C9JQI7 657 aa17.04■□□□□ 0.32
COL2A1-209ENST00000546974 ORC4O43929 436 aa17.04■□□□□ 0.32
COL2A1-209ENST00000546974 PLA2G6O60733 806 aa17.04■□□□□ 0.32
COL2A1-209ENST00000546974 FGRP09769 529 aa17.04■□□□□ 0.32
COL2A1-209ENST00000546974 ZNF865P0CJ78 1059 aaPredicted RBP17.04■□□□□ 0.32
COL2A1-209ENST00000546974 RARBP10826 455 aa17.04■□□□□ 0.32
COL2A1-209ENST00000546974 SLC1A4P43007 532 aa17.04■□□□□ 0.32
COL2A1-209ENST00000546974 RTP1P59025 263 aa17.04■□□□□ 0.32
COL2A1-209ENST00000546974 MAMDC4Q6UXC1 1216 aa17.04■□□□□ 0.32
COL2A1-209ENST00000546974 SLC39A5Q6ZMH5 540 aa17.04■□□□□ 0.32
COL2A1-209ENST00000546974 ZNF467Q7Z7K2 595 aaPredicted RBP17.04■□□□□ 0.32
COL2A1-209ENST00000546974 FAM160B2Q86V87 743 aa17.04■□□□□ 0.32
COL2A1-209ENST00000546974 TDHQ8IZJ6 230 aa17.04■□□□□ 0.32
COL2A1-209ENST00000546974 CHST13Q8NET6 341 aa17.04■□□□□ 0.32
COL2A1-209ENST00000546974 FAM227BQ96M60 508 aa17.04■□□□□ 0.32
COL2A1-209ENST00000546974 INCENPQ9NQS7 918 aa17.04■□□□□ 0.32
COL2A1-209ENST00000546974 IL17RBQ9NRM6 502 aa17.04■□□□□ 0.32
COL2A1-209ENST00000546974 STX8Q9UNK0 236 aa17.04■□□□□ 0.32
COL2A1-209ENST00000546974 CNPY2Q9Y2B0 182 aa17.04■□□□□ 0.32
COL2A1-209ENST00000546974 MCM3APO60318 1980 aa17.03■□□□□ 0.32
COL2A1-209ENST00000546974 A0A0D9SFI3 127 aa17.03■□□□□ 0.32
COL2A1-209ENST00000546974 TRIM6-TRIM34B2RNG4 842 aa17.03■□□□□ 0.32
COL2A1-209ENST00000546974 SOX1O00570 391 aaPredicted RBP17.03■□□□□ 0.32
COL2A1-209ENST00000546974 RANBP6O60518 1105 aaKnown RBP17.03■□□□□ 0.32
COL2A1-209ENST00000546974 FGAP02671 866 aa17.03■□□□□ 0.32
COL2A1-209ENST00000546974 AKR1A1P14550 325 aa17.03■□□□□ 0.32
COL2A1-209ENST00000546974 TAL1P17542 331 aaPredicted RBP17.03■□□□□ 0.32
COL2A1-209ENST00000546974 NOVP48745 357 aa17.03■□□□□ 0.32
COL2A1-209ENST00000546974 SLC4A3P48751 1232 aa17.03■□□□□ 0.32
COL2A1-209ENST00000546974 SNX17Q15036 470 aa17.03■□□□□ 0.32
COL2A1-209ENST00000546974 LRIT3Q3SXY7 679 aa17.03■□□□□ 0.32
COL2A1-209ENST00000546974 STAG1Q8WVM7 1258 aa17.03■□□□□ 0.32
COL2A1-209ENST00000546974 UBE2OQ9C0C9 1292 aaKnown RBP17.03■□□□□ 0.32
COL2A1-209ENST00000546974 XPNPEP3Q9NQH7 507 aa17.03■□□□□ 0.32
COL2A1-209ENST00000546974 TACC3Q9Y6A5 838 aa17.03■□□□□ 0.32
COL2A1-209ENST00000546974 ZMYM6O95789 1325 aa17.02■□□□□ 0.32
COL2A1-209ENST00000546974 MYCNP04198 464 aaPredicted RBP17.02■□□□□ 0.32
COL2A1-209ENST00000546974 HSPD1P10809 573 aaKnown RBP17.02■□□□□ 0.32
COL2A1-209ENST00000546974 MCCP23508 829 aa17.02■□□□□ 0.32
COL2A1-209ENST00000546974 ADCYAP1R1P41586 468 aa17.02■□□□□ 0.32
COL2A1-209ENST00000546974 MDM2Q00987 491 aaPredicted RBP17.02■□□□□ 0.32
COL2A1-209ENST00000546974 C1orf53Q5VUE5 145 aa17.02■□□□□ 0.32
COL2A1-209ENST00000546974 RCSD1Q6JBY9 416 aa17.02■□□□□ 0.32
COL2A1-209ENST00000546974 B4GALNT3Q6L9W6 998 aa17.02■□□□□ 0.32
COL2A1-209ENST00000546974 RNF180Q86T96 592 aa17.02■□□□□ 0.32
COL2A1-209ENST00000546974 CHD1LQ86WJ1 897 aa17.02■□□□□ 0.32
COL2A1-209ENST00000546974 ANKRD35Q8N283 1001 aa17.02■□□□□ 0.32
COL2A1-209ENST00000546974 OSBPL3Q9H4L5 887 aa17.02■□□□□ 0.32
COL2A1-209ENST00000546974 ISY1Q9ULR0 285 aaKnown RBP17.02■□□□□ 0.32
COL2A1-209ENST00000546974 NMT2O60551 498 aa17.01■□□□□ 0.31
COL2A1-209ENST00000546974 SNAI1O95863 264 aaPredicted RBP17.01■□□□□ 0.31
COL2A1-209ENST00000546974 IGHDP01880 384 aa17.01■□□□□ 0.31
COL2A1-209ENST00000546974 NUCB1Q02818 461 aa17.01■□□□□ 0.31
COL2A1-209ENST00000546974 IKQ13123 557 aaPredicted RBP17.01■□□□□ 0.31
COL2A1-209ENST00000546974 NMIQ13287 307 aaPredicted RBP17.01■□□□□ 0.31
COL2A1-209ENST00000546974 GPR153Q6NV75 609 aa17.01■□□□□ 0.31
COL2A1-209ENST00000546974 ZNF589Q86UQ0 364 aaPredicted RBP17.01■□□□□ 0.31
COL2A1-209ENST00000546974 RILPL2Q969X0 211 aa17.01■□□□□ 0.31
COL2A1-209ENST00000546974 LRCH3Q96II8 777 aa17.01■□□□□ 0.31
COL2A1-209ENST00000546974 LBHD1Q9BQE6 289 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms