RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 STIM1Q13586 685 aa8.82□□□□□ -1
UBR1-202ENST00000546274 LAMB3Q13751 1172 aa8.82□□□□□ -1
UBR1-202ENST00000546274 ANKRD23Q86SG2 305 aa8.82□□□□□ -1
UBR1-202ENST00000546274 PARP9Q8IXQ6 854 aa8.82□□□□□ -1
UBR1-202ENST00000546274 CCDC13Q8IYE1 715 aa8.82□□□□□ -1
UBR1-202ENST00000546274 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.82□□□□□ -1
UBR1-202ENST00000546274 INTS13Q9NVM9 706 aa8.82□□□□□ -1
UBR1-202ENST00000546274 B4E1Z4 1266 aa8.82□□□□□ -1
UBR1-202ENST00000546274 PPFIA2O75334 1257 aa8.82□□□□□ -1
UBR1-202ENST00000546274 IL2RBP14784 551 aa8.82□□□□□ -1
UBR1-202ENST00000546274 SMTNP53814 917 aa8.82□□□□□ -1
UBR1-202ENST00000546274 MDM2Q00987 491 aaPredicted RBP8.82□□□□□ -1
UBR1-202ENST00000546274 IFT88Q13099 833 aa8.82□□□□□ -1
UBR1-202ENST00000546274 PDCLQ13371 301 aa8.82□□□□□ -1
UBR1-202ENST00000546274 SLC5A9Q2M3M2 681 aa8.82□□□□□ -1
UBR1-202ENST00000546274 LONRF3Q496Y0 759 aa8.82□□□□□ -1
UBR1-202ENST00000546274 MFSD4BQ5TF39 518 aa8.82□□□□□ -1
UBR1-202ENST00000546274 TMEM139Q8IV31 216 aa8.82□□□□□ -1
UBR1-202ENST00000546274 WWC3Q9ULE0 1092 aa8.82□□□□□ -1
UBR1-202ENST00000546274 MYH2Q9UKX2 1941 aa8.82□□□□□ -1
UBR1-202ENST00000546274 ZNF532Q9HCE3 1301 aa8.82□□□□□ -1
UBR1-202ENST00000546274 SOCS7O14512 581 aa8.81□□□□□ -1
UBR1-202ENST00000546274 MYO1BO43795 1136 aa8.81□□□□□ -1
UBR1-202ENST00000546274 TOP1P11387 765 aaKnown RBP8.81□□□□□ -1
UBR1-202ENST00000546274 ARHGAP25P42331 645 aa8.81□□□□□ -1
UBR1-202ENST00000546274 UBASH3AP57075 661 aa8.81□□□□□ -1
UBR1-202ENST00000546274 PDE4BQ07343 736 aa8.81□□□□□ -1
UBR1-202ENST00000546274 UBE3CQ15386 1083 aa8.81□□□□□ -1
UBR1-202ENST00000546274 GNPTABQ3T906 1256 aa8.81□□□□□ -1
UBR1-202ENST00000546274 METTL24Q5JXM2 366 aa8.81□□□□□ -1
UBR1-202ENST00000546274 SGMS1Q86VZ5 419 aa8.81□□□□□ -1
UBR1-202ENST00000546274 MYLK4Q86YV6 388 aaPredicted RBP8.81□□□□□ -1
UBR1-202ENST00000546274 DNAJC10Q8IXB1 793 aa8.81□□□□□ -1
UBR1-202ENST00000546274 GSPT2Q8IYD1 628 aaKnown RBP8.81□□□□□ -1
UBR1-202ENST00000546274 NOA1Q8NC60 698 aaKnown RBP8.81□□□□□ -1
UBR1-202ENST00000546274 EZH1Q92800 747 aaPredicted RBP8.81□□□□□ -1
UBR1-202ENST00000546274 MYL10Q9BUA6 226 aa8.81□□□□□ -1
UBR1-202ENST00000546274 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.81□□□□□ -1
UBR1-202ENST00000546274 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.81□□□□□ -12e-6■■■■□ 20.6
UBR1-202ENST00000546274 EPB41L4AQ9HCS5 686 aaPredicted RBP8.81□□□□□ -1
UBR1-202ENST00000546274 TAOK2Q9UL54 1235 aa8.81□□□□□ -1
UBR1-202ENST00000546274 NID2Q14112 1375 aa8.81□□□□□ -1
UBR1-202ENST00000546274 A0A1B0GUL6 1792 aa8.81□□□□□ -1
UBR1-202ENST00000546274 TMEM232C9JQI7 657 aa8.81□□□□□ -1
UBR1-202ENST00000546274 FOXN1O15353 648 aa8.81□□□□□ -1
UBR1-202ENST00000546274 PRPHP41219 470 aa8.81□□□□□ -1
UBR1-202ENST00000546274 PPFIA1Q13136 1202 aa8.81□□□□□ -1
UBR1-202ENST00000546274 GIGYF2Q6Y7W6 1299 aaKnown RBP8.81□□□□□ -1
UBR1-202ENST00000546274 ILDR2Q71H61 639 aa8.81□□□□□ -1
UBR1-202ENST00000546274 NLRP10Q86W26 655 aa8.81□□□□□ -1
UBR1-202ENST00000546274 FAM228AQ86W67 206 aa8.81□□□□□ -1
UBR1-202ENST00000546274 MICU3Q86XE3 530 aa8.81□□□□□ -1
UBR1-202ENST00000546274 STK11IPQ8N1F8 1099 aa8.81□□□□□ -1
UBR1-202ENST00000546274 MSANTD4Q8NCY6 345 aa8.81□□□□□ -1
UBR1-202ENST00000546274 B4GALNT2Q8NHY0 566 aa8.81□□□□□ -1
UBR1-202ENST00000546274 GJD4Q96KN9 370 aaPredicted RBP8.81□□□□□ -1
UBR1-202ENST00000546274 TSGA10Q9BZW7 698 aa8.81□□□□□ -1
UBR1-202ENST00000546274 ASAP1Q9ULH1 1129 aa8.81□□□□□ -1
UBR1-202ENST00000546274 ZNF330Q9Y3S2 320 aaPredicted RBP8.81□□□□□ -1
UBR1-202ENST00000546274 MAP3K15Q6ZN16 1313 aa8.81□□□□□ -1
UBR1-202ENST00000546274 CASZ1Q86V15 1759 aa8.81□□□□□ -1
UBR1-202ENST00000546274 CTAGE15A4D2H0 777 aa8.8□□□□□ -1
UBR1-202ENST00000546274 ARHGAP6O43182 974 aa8.8□□□□□ -1
UBR1-202ENST00000546274 SHOX2O60902 331 aaPredicted RBP8.8□□□□□ -1
UBR1-202ENST00000546274 CTAGE8P0CG41 777 aa8.8□□□□□ -1
UBR1-202ENST00000546274 PDE6AP16499 860 aa8.8□□□□□ -1
UBR1-202ENST00000546274 PHKA1P46020 1223 aa8.8□□□□□ -1
UBR1-202ENST00000546274 TOB1P50616 345 aaPredicted RBP8.8□□□□□ -1
UBR1-202ENST00000546274 ATP1A2P50993 1020 aa8.8□□□□□ -1
UBR1-202ENST00000546274 ADKP55263 362 aaKnown RBP8.8□□□□□ -1
UBR1-202ENST00000546274 CTSWP56202 376 aa8.8□□□□□ -1
UBR1-202ENST00000546274 MYL5Q02045 173 aa8.8□□□□□ -1
UBR1-202ENST00000546274 MYO1EQ12965 1108 aa8.8□□□□□ -1
UBR1-202ENST00000546274 CCDC96Q2M329 555 aa8.8□□□□□ -1
UBR1-202ENST00000546274 CDCA2Q69YH5 1023 aaPredicted RBP8.8□□□□□ -1
UBR1-202ENST00000546274 TLDC1Q6P9B6 456 aa8.8□□□□□ -1
UBR1-202ENST00000546274 LDHAL6AQ6ZMR3 332 aa8.8□□□□□ -1
UBR1-202ENST00000546274 CTAGE6Q86UF2 777 aa8.8□□□□□ -1
UBR1-202ENST00000546274 VSTM4Q8IW00 320 aa8.8□□□□□ -1
UBR1-202ENST00000546274 CTAGE4Q8IX94 777 aa8.8□□□□□ -1
UBR1-202ENST00000546274 STRBPQ96SI9 672 aaKnown RBP8.8□□□□□ -1
UBR1-202ENST00000546274 RMI1Q9H9A7 625 aa8.8□□□□□ -1
UBR1-202ENST00000546274 FANCLQ9NW38 375 aa8.8□□□□□ -1
UBR1-202ENST00000546274 CDC23Q9UJX2 597 aa8.8□□□□□ -1
UBR1-202ENST00000546274 TPX2Q9ULW0 747 aaKnown RBP8.8□□□□□ -1
UBR1-202ENST00000546274 HPCAL4Q9UM19 191 aa8.8□□□□□ -1
UBR1-202ENST00000546274 RASSF9O75901 435 aa8.8□□□□□ -1
UBR1-202ENST00000546274 ZNF569Q5MCW4 686 aa8.8□□□□□ -1
UBR1-202ENST00000546274 CCDC102BQ68D86 513 aa8.8□□□□□ -1
UBR1-202ENST00000546274 RCSD1Q6JBY9 416 aa8.8□□□□□ -1
UBR1-202ENST00000546274 CYB5D1Q6P9G0 228 aa8.8□□□□□ -1
UBR1-202ENST00000546274 TMEM87BQ96K49 555 aa8.8□□□□□ -1
UBR1-202ENST00000546274 ATP6V0A4Q9HBG4 840 aa8.8□□□□□ -1
UBR1-202ENST00000546274 BTG4Q9NY30 223 aa8.8□□□□□ -1
UBR1-202ENST00000546274 WNK3Q9BYP7 1800 aa8.8□□□□□ -1
UBR1-202ENST00000546274 DLEC1Q9Y238 1755 aa8.8□□□□□ -1
UBR1-202ENST00000546274 STK36Q9NRP7 1315 aa8.8□□□□□ -1
UBR1-202ENST00000546274 A0A0U1RQJ8 604 aa8.8□□□□□ -1
UBR1-202ENST00000546274 CDKL5O76039 1030 aa8.8□□□□□ -1
UBR1-202ENST00000546274 PDE8BO95263 885 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms