RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 IKQ13123 557 aaPredicted RBP24.29■■□□□ 1.48
SCARB1-211ENST00000546215 ASPRV1Q53RT3 343 aa24.29■■□□□ 1.48
SCARB1-211ENST00000546215 REPS2Q8NFH8 660 aa24.29■■□□□ 1.48
SCARB1-211ENST00000546215 PARP1P09874 1014 aaKnown RBP24.28■■□□□ 1.48
SCARB1-211ENST00000546215 SLC16A2P36021 539 aa24.28■■□□□ 1.48
SCARB1-211ENST00000546215 RBM25P49756 843 aaKnown RBP24.28■■□□□ 1.48
SCARB1-211ENST00000546215 LACTBP83111 547 aaPredicted RBP24.28■■□□□ 1.48
SCARB1-211ENST00000546215 CAP1Q01518 475 aa24.28■■□□□ 1.48
SCARB1-211ENST00000546215 MAD2L2Q9UI95 211 aa24.28■■□□□ 1.48
SCARB1-211ENST00000546215 PALM3A6NDB9 673 aaPredicted RBP24.27■■□□□ 1.48
SCARB1-211ENST00000546215 DDAH1O94760 285 aa24.27■■□□□ 1.48
SCARB1-211ENST00000546215 GRM4Q14833 912 aa24.27■■□□□ 1.48
SCARB1-211ENST00000546215 TMEM132BQ14DG7 1078 aa24.27■■□□□ 1.48
SCARB1-211ENST00000546215 STAG2Q8N3U4 1231 aa24.27■■□□□ 1.48
SCARB1-211ENST00000546215 CD99L2Q8TCZ2 262 aa24.27■■□□□ 1.48
SCARB1-211ENST00000546215 MAP3K14Q99558 947 aa24.27■■□□□ 1.48
SCARB1-211ENST00000546215 MYL10Q9BUA6 226 aa24.27■■□□□ 1.48
SCARB1-211ENST00000546215 SLC38A10Q9HBR0 1119 aa24.27■■□□□ 1.48
SCARB1-211ENST00000546215 PRDM10Q9NQV6 1147 aa24.27■■□□□ 1.48
SCARB1-211ENST00000546215 BRPF3Q9ULD4 1205 aa24.27■■□□□ 1.48
SCARB1-211ENST00000546215 PRR12Q9ULL5 1215 aa24.27■■□□□ 1.48
SCARB1-211ENST00000546215 SLC12A7Q9Y666 1083 aa24.27■■□□□ 1.48
SCARB1-211ENST00000546215 COL11A1P12107 1806 aaPredicted RBP24.27■■□□□ 1.48
SCARB1-211ENST00000546215 FGD1P98174 961 aa24.26■■□□□ 1.47
SCARB1-211ENST00000546215 NUP133Q8WUM0 1156 aa24.26■■□□□ 1.47
SCARB1-211ENST00000546215 UPF2Q9HAU5 1272 aaKnown RBP24.26■■□□□ 1.47
SCARB1-211ENST00000546215 CTGFP29279 349 aa24.25■■□□□ 1.47
SCARB1-211ENST00000546215 SYDE2Q5VT97 1194 aa24.25■■□□□ 1.47
SCARB1-211ENST00000546215 APOA5Q6Q788 366 aa24.25■■□□□ 1.47
SCARB1-211ENST00000546215 BRF1Q92994 677 aa24.25■■□□□ 1.47
SCARB1-211ENST00000546215 ERO1AQ96HE7 468 aa24.25■■□□□ 1.47
SCARB1-211ENST00000546215 KIF2CQ99661 725 aa24.25■■□□□ 1.47
SCARB1-211ENST00000546215 ARHGAP39Q9C0H5 1083 aa24.25■■□□□ 1.47
SCARB1-211ENST00000546215 UBA5Q9GZZ9 404 aa24.25■■□□□ 1.47
SCARB1-211ENST00000546215 CPVLQ9H3G5 476 aa24.25■■□□□ 1.47
SCARB1-211ENST00000546215 ZNF214Q9UL59 606 aaPredicted RBP24.25■■□□□ 1.47
SCARB1-211ENST00000546215 ZBED4O75132 1171 aa24.25■■□□□ 1.47
SCARB1-211ENST00000546215 FDX1P10109 184 aa24.25■■□□□ 1.47
SCARB1-211ENST00000546215 TOB2Q14106 344 aaPredicted RBP24.25■■□□□ 1.47
SCARB1-211ENST00000546215 SPATC1LQ9H0A9 340 aa24.25■■□□□ 1.47
SCARB1-211ENST00000546215 KLRF2D3W0D1 207 aa24.24■■□□□ 1.47
SCARB1-211ENST00000546215 CALM1P0DP23 149 aa24.24■■□□□ 1.47
SCARB1-211ENST00000546215 CALM2P0DP24 149 aa24.24■■□□□ 1.47
SCARB1-211ENST00000546215 CALM3P0DP25 149 aa24.24■■□□□ 1.47
SCARB1-211ENST00000546215 RXRAP19793 462 aa24.24■■□□□ 1.47
SCARB1-211ENST00000546215 PORCNQ9H237 461 aa24.24■■□□□ 1.47
SCARB1-211ENST00000546215 PDRG1Q9NUG6 133 aa24.24■■□□□ 1.47
SCARB1-211ENST00000546215 KLF18A0A0U1RQI7 1052 aa24.23■■□□□ 1.47
SCARB1-211ENST00000546215 ATP2A1O14983 1001 aa24.23■■□□□ 1.47
SCARB1-211ENST00000546215 ECM2O94769 699 aaPredicted RBP24.23■■□□□ 1.47
SCARB1-211ENST00000546215 PSMC4P43686 418 aa24.23■■□□□ 1.47
SCARB1-211ENST00000546215 APOBRQ0VD83 1088 aa24.23■■□□□ 1.47
SCARB1-211ENST00000546215 KIF22Q14807 665 aa24.23■■□□□ 1.47
SCARB1-211ENST00000546215 SYNE3Q6ZMZ3 975 aa24.23■■□□□ 1.47
SCARB1-211ENST00000546215 RAB11FIP4Q86YS3 637 aa24.23■■□□□ 1.47
SCARB1-211ENST00000546215 MOV10L1Q9BXT6 1211 aaKnown RBP24.23■■□□□ 1.47
SCARB1-211ENST00000546215 ZSWIM8A7E2V4 1837 aa24.23■■□□□ 1.47
SCARB1-211ENST00000546215 EVCP57679 992 aa24.22■■□□□ 1.47
SCARB1-211ENST00000546215 SNAP25P60880 206 aa24.22■■□□□ 1.47
SCARB1-211ENST00000546215 CCNA1P78396 465 aa24.22■■□□□ 1.47
SCARB1-211ENST00000546215 PLS1Q14651 629 aa24.22■■□□□ 1.47
SCARB1-211ENST00000546215 MICU3Q86XE3 530 aa24.22■■□□□ 1.47
SCARB1-211ENST00000546215 CTCFLQ8NI51 663 aaPredicted RBP24.22■■□□□ 1.47
SCARB1-211ENST00000546215 TRIM47Q96LD4 638 aa24.22■■□□□ 1.47
SCARB1-211ENST00000546215 ALDH8A1Q9H2A2 487 aaPredicted RBP24.22■■□□□ 1.47
SCARB1-211ENST00000546215 RANBP17Q9H2T7 1088 aaKnown RBP24.22■■□□□ 1.47
SCARB1-211ENST00000546215 DOCK3Q8IZD9 2030 aa24.22■■□□□ 1.47
SCARB1-211ENST00000546215 MGAMO43451 1857 aa24.22■■□□□ 1.47
SCARB1-211ENST00000546215 KIF5BP33176 963 aa24.21■■□□□ 1.47
SCARB1-211ENST00000546215 STAT3P40763 770 aa24.21■■□□□ 1.47
SCARB1-211ENST00000546215 OAZ1P54368 228 aa24.21■■□□□ 1.47
SCARB1-211ENST00000546215 ADGRF4Q8IZF3 695 aa24.21■■□□□ 1.47
SCARB1-211ENST00000546215 FANCBQ8NB91 859 aa24.21■■□□□ 1.47
SCARB1-211ENST00000546215 TBC1D32Q96NH3 1257 aa24.21■■□□□ 1.47
SCARB1-211ENST00000546215 EFCC1Q9HA90 598 aa24.21■■□□□ 1.47
SCARB1-211ENST00000546215 ZNF536O15090 1300 aa24.21■■□□□ 1.47
SCARB1-211ENST00000546215 ZBTB43O43298 467 aa24.2■■□□□ 1.47
SCARB1-211ENST00000546215 FCGRTP55899 365 aa24.2■■□□□ 1.47
SCARB1-211ENST00000546215 SLC35G1Q2M3R5 365 aa24.2■■□□□ 1.47
SCARB1-211ENST00000546215 NBPF11Q86T75 865 aa24.2■■□□□ 1.47
SCARB1-211ENST00000546215 CCDC144CPQ8IYA2 1237 aa24.2■■□□□ 1.47
SCARB1-211ENST00000546215 CPXCR1Q8N123 301 aa24.2■■□□□ 1.47
SCARB1-211ENST00000546215 TEX13BQ9BXU2 312 aa24.2■■□□□ 1.47
SCARB1-211ENST00000546215 RAVER2Q9HCJ3 691 aaKnown RBP24.2■■□□□ 1.47
SCARB1-211ENST00000546215 CTDP1Q9Y5B0 961 aaPredicted RBP24.2■■□□□ 1.47
SCARB1-211ENST00000546215 BAZ2BQ9UIF8 2168 aaKnown RBP24.2■■□□□ 1.46
SCARB1-211ENST00000546215 HTTP42858 3142 aa24.2■■□□□ 1.46
SCARB1-211ENST00000546215 FMNL1O95466 1100 aaPredicted RBP24.2■■□□□ 1.46
SCARB1-211ENST00000546215 MAPK4P31152 587 aa24.2■■□□□ 1.46
SCARB1-211ENST00000546215 RCAN1P53805 252 aa24.2■■□□□ 1.46
SCARB1-211ENST00000546215 RIOX2Q8IUF8 465 aa24.2■■□□□ 1.46
SCARB1-211ENST00000546215 CYTH3O43739 400 aa24.19■■□□□ 1.46
SCARB1-211ENST00000546215 NEK4P51957 841 aa24.19■■□□□ 1.46
SCARB1-211ENST00000546215 SNRNP48Q6IEG0 339 aaKnown RBP24.19■■□□□ 1.46
SCARB1-211ENST00000546215 OTOP1Q7RTM1 612 aa24.19■■□□□ 1.46
SCARB1-211ENST00000546215 SHCBP1Q8NEM2 672 aa24.19■■□□□ 1.46
SCARB1-211ENST00000546215 RIOX1Q9H6W3 641 aa24.19■■□□□ 1.46
SCARB1-211ENST00000546215 JMJD4Q9H9V9 463 aa24.19■■□□□ 1.46
SCARB1-211ENST00000546215 HPS5Q9UPZ3 1129 aa24.19■■□□□ 1.46
SCARB1-211ENST00000546215 RIPK3Q9Y572 518 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms