RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 ASCC2Q9H1I8 757 aaPredicted RBP12.53□□□□□ -0.4
PAAF1-216ENST00000546039 SLKQ9H2G2 1235 aaPredicted RBP12.53□□□□□ -0.4
PAAF1-216ENST00000546039 GPCPD1Q9NPB8 672 aa12.53□□□□□ -0.4
PAAF1-216ENST00000546039 PPP1R9AQ9ULJ8 1098 aa12.53□□□□□ -0.4
PAAF1-216ENST00000546039 HPS5Q9UPZ3 1129 aa12.53□□□□□ -0.4
PAAF1-216ENST00000546039 KLRF2D3W0D1 207 aa12.52□□□□□ -0.41
PAAF1-216ENST00000546039 CD2BP2O95400 341 aaKnown RBP12.52□□□□□ -0.41
PAAF1-216ENST00000546039 GOLGA8HP0CJ92 632 aa12.52□□□□□ -0.41
PAAF1-216ENST00000546039 FDX1P10109 184 aa12.52□□□□□ -0.41
PAAF1-216ENST00000546039 SMARCA1P28370 1054 aa12.52□□□□□ -0.41
PAAF1-216ENST00000546039 DSG3P32926 999 aa12.52□□□□□ -0.41
PAAF1-216ENST00000546039 STK3Q13188 491 aa12.52□□□□□ -0.41
PAAF1-216ENST00000546039 COG2Q14746 738 aa12.52□□□□□ -0.41
PAAF1-216ENST00000546039 TAF1CQ15572 869 aaPredicted RBP12.52□□□□□ -0.41
PAAF1-216ENST00000546039 ME3Q16798 604 aa12.52□□□□□ -0.41
PAAF1-216ENST00000546039 SYDE2Q5VT97 1194 aa12.52□□□□□ -0.41
PAAF1-216ENST00000546039 CPLX2Q6PUV4 134 aaKnown RBP12.52□□□□□ -0.41
PAAF1-216ENST00000546039 LBX2Q6XYB7 198 aa12.52□□□□□ -0.41
PAAF1-216ENST00000546039 TMTC3Q6ZXV5 915 aa12.52□□□□□ -0.41
PAAF1-216ENST00000546039 STAG2Q8N3U4 1231 aa12.52□□□□□ -0.41
PAAF1-216ENST00000546039 PRPF38AQ8NAV1 312 aaKnown RBP12.52□□□□□ -0.41
PAAF1-216ENST00000546039 GTF3C6Q969F1 213 aa12.52□□□□□ -0.41
PAAF1-216ENST00000546039 SNX21Q969T3 373 aa12.52□□□□□ -0.41
PAAF1-216ENST00000546039 SPZ1Q9BXG8 430 aa12.52□□□□□ -0.41
PAAF1-216ENST00000546039 FBXO28Q9NVF7 368 aa12.52□□□□□ -0.41
PAAF1-216ENST00000546039 HOXC10Q9NYD6 342 aa12.52□□□□□ -0.41
PAAF1-216ENST00000546039 DOCK3Q8IZD9 2030 aa12.52□□□□□ -0.41
PAAF1-216ENST00000546039 PLXNA1Q9UIW2 1896 aa12.51□□□□□ -0.41
PAAF1-216ENST00000546039 SPDYE16A6NNV3 312 aaPredicted RBP12.51□□□□□ -0.41
PAAF1-216ENST00000546039 DHX16O60231 1041 aaKnown RBP12.51□□□□□ -0.41
PAAF1-216ENST00000546039 PLEKHA8P1O95397 391 aa12.51□□□□□ -0.41
PAAF1-216ENST00000546039 LARGE1O95461 756 aa12.51□□□□□ -0.41
PAAF1-216ENST00000546039 HERVK_113P62684 666 aa12.51□□□□□ -0.41
PAAF1-216ENST00000546039 CCT2P78371 535 aaKnown RBP12.51□□□□□ -0.41
PAAF1-216ENST00000546039 TTBK2Q6IQ55 1244 aa12.51□□□□□ -0.41
PAAF1-216ENST00000546039 HSCBQ8IWL3 235 aa12.51□□□□□ -0.41
PAAF1-216ENST00000546039 MB21D1Q8N884 522 aa12.51□□□□□ -0.41
PAAF1-216ENST00000546039 SMCR8Q8TEV9 937 aaPredicted RBP12.51□□□□□ -0.41
PAAF1-216ENST00000546039 KIFC2Q96AC6 838 aa12.51□□□□□ -0.41
PAAF1-216ENST00000546039 FAM217BQ9NTX9 383 aaPredicted RBP12.51□□□□□ -0.41
PAAF1-216ENST00000546039 PRR12Q9ULL5 1215 aa12.51□□□□□ -0.41
PAAF1-216ENST00000546039 CNTNAP5Q8WYK1 1306 aa12.51□□□□□ -0.41
PAAF1-216ENST00000546039 CPLX1O14810 134 aa12.5□□□□□ -0.41
PAAF1-216ENST00000546039 CDKL5O76039 1030 aa12.5□□□□□ -0.41
PAAF1-216ENST00000546039 CDC27P30260 824 aa12.5□□□□□ -0.41
PAAF1-216ENST00000546039 SLC16A2P36021 539 aa12.5□□□□□ -0.41
PAAF1-216ENST00000546039 GCLCP48506 637 aaPredicted RBP12.5□□□□□ -0.41
PAAF1-216ENST00000546039 SCRN1Q12765 414 aa12.5□□□□□ -0.41
PAAF1-216ENST00000546039 SAMD1Q6SPF0 538 aaPredicted RBP12.5□□□□□ -0.41
PAAF1-216ENST00000546039 ATG4CQ96DT6 458 aa12.5□□□□□ -0.41
PAAF1-216ENST00000546039 P2RX7Q99572 595 aaKnown RBP12.5□□□□□ -0.41
PAAF1-216ENST00000546039 RIOX1Q9H6W3 641 aa12.5□□□□□ -0.41
PAAF1-216ENST00000546039 NCOA5Q9HCD5 579 aaKnown RBP12.5□□□□□ -0.41
PAAF1-216ENST00000546039 CTDP1Q9Y5B0 961 aaPredicted RBP12.5□□□□□ -0.41
PAAF1-216ENST00000546039 ZNF236Q9UL36 1845 aa12.49□□□□□ -0.41
PAAF1-216ENST00000546039 ADGRA2Q96PE1 1338 aa12.49□□□□□ -0.41
PAAF1-216ENST00000546039 K7ELQ4 463 aaPredicted RBP12.49□□□□□ -0.41
PAAF1-216ENST00000546039 VWA5AO00534 786 aa12.49□□□□□ -0.41
PAAF1-216ENST00000546039 CA12O43570 354 aa12.49□□□□□ -0.41
PAAF1-216ENST00000546039 IFNAR1P17181 557 aa12.49□□□□□ -0.41
PAAF1-216ENST00000546039 ADD1P35611 737 aaKnown RBP12.49□□□□□ -0.41
PAAF1-216ENST00000546039 MAP2K1Q02750 393 aaPredicted RBP12.49□□□□□ -0.41
PAAF1-216ENST00000546039 ADGRF4Q8IZF3 695 aa12.49□□□□□ -0.41
PAAF1-216ENST00000546039 SRBD1Q8N5C6 995 aaKnown RBP12.49□□□□□ -0.41
PAAF1-216ENST00000546039 TMX3Q96JJ7 454 aa12.49□□□□□ -0.41
PAAF1-216ENST00000546039 CFHR5Q9BXR6 569 aa12.49□□□□□ -0.41
PAAF1-216ENST00000546039 UBA5Q9GZZ9 404 aa12.49□□□□□ -0.41
PAAF1-216ENST00000546039 RANBP17Q9H2T7 1088 aaKnown RBP12.49□□□□□ -0.41
PAAF1-216ENST00000546039 CPVLQ9H3G5 476 aa12.49□□□□□ -0.41
PAAF1-216ENST00000546039 SLC38A10Q9HBR0 1119 aa12.49□□□□□ -0.41
PAAF1-216ENST00000546039 ZFYVE28Q9HCC9 887 aa12.49□□□□□ -0.41
PAAF1-216ENST00000546039 RBM27Q9P2N5 1060 aaKnown RBP12.49□□□□□ -0.41
PAAF1-216ENST00000546039 PNMA2Q9UL42 364 aa12.49□□□□□ -0.41
PAAF1-216ENST00000546039 ADAMTS5Q9UNA0 930 aa12.49□□□□□ -0.41
PAAF1-216ENST00000546039 RABGAP1Q9Y3P9 1069 aa12.49□□□□□ -0.41
PAAF1-216ENST00000546039 CASP8AP2Q9UKL3 1982 aa12.49□□□□□ -0.41
PAAF1-216ENST00000546039 LCTP09848 1927 aa12.49□□□□□ -0.41
PAAF1-216ENST00000546039 ZSWIM8A7E2V4 1837 aa12.48□□□□□ -0.41
PAAF1-216ENST00000546039 STK36Q9NRP7 1315 aa12.48□□□□□ -0.41
PAAF1-216ENST00000546039 CYTH3O43739 400 aa12.48□□□□□ -0.41
PAAF1-216ENST00000546039 ZBED4O75132 1171 aa12.48□□□□□ -0.41
PAAF1-216ENST00000546039 CYP2C8P10632 490 aa12.48□□□□□ -0.41
PAAF1-216ENST00000546039 OAZ1P54368 228 aa12.48□□□□□ -0.41
PAAF1-216ENST00000546039 FUT2Q10981 343 aa12.48□□□□□ -0.41
PAAF1-216ENST00000546039 NTRK3Q16288 839 aa12.48□□□□□ -0.41
PAAF1-216ENST00000546039 CDC37Q16543 378 aaPredicted RBP12.48□□□□□ -0.41
PAAF1-216ENST00000546039 SLC35G1Q2M3R5 365 aa12.48□□□□□ -0.41
PAAF1-216ENST00000546039 NBPF11Q86T75 865 aa12.48□□□□□ -0.41
PAAF1-216ENST00000546039 CCDC83Q8IWF9 413 aa12.48□□□□□ -0.41
PAAF1-216ENST00000546039 TRIM22Q8IYM9 498 aa12.48□□□□□ -0.41
PAAF1-216ENST00000546039 DNAJC5GQ8N7S2 189 aa12.48□□□□□ -0.41
PAAF1-216ENST00000546039 NECAB1Q8N987 351 aa12.48□□□□□ -0.41
PAAF1-216ENST00000546039 MTMR8Q96EF0 704 aa12.48□□□□□ -0.41
PAAF1-216ENST00000546039 RRP36Q96EU6 259 aaKnown RBP12.48□□□□□ -0.41
PAAF1-216ENST00000546039 RNF26Q9BY78 433 aaPredicted RBP12.48□□□□□ -0.41
PAAF1-216ENST00000546039 JMJD4Q9H9V9 463 aa12.48□□□□□ -0.41
PAAF1-216ENST00000546039 SAGE1Q9NXZ1 904 aa12.48□□□□□ -0.41
PAAF1-216ENST00000546039 SEC63Q9UGP8 760 aaKnown RBP12.48□□□□□ -0.41
PAAF1-216ENST00000546039 ATP2A1O14983 1001 aa12.47□□□□□ -0.41
PAAF1-216ENST00000546039 ZBTB5O15062 677 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms