RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 ALX1Q15699 326 aa23.57■■□□□ 1.36
CHD4-213ENST00000545584 CPXCR1Q8N123 301 aa23.57■■□□□ 1.36
CHD4-213ENST00000545584 ARRDC4Q8NCT1 418 aa23.57■■□□□ 1.36
CHD4-213ENST00000545584 FAM227BQ96M60 508 aa23.57■■□□□ 1.36
CHD4-213ENST00000545584 ANAPC4Q9UJX5 808 aa23.57■■□□□ 1.36
CHD4-213ENST00000545584 ZMYND8Q9ULU4 1186 aaPredicted RBP23.57■■□□□ 1.36
CHD4-213ENST00000545584 STX8Q9UNK0 236 aa23.57■■□□□ 1.36
CHD4-213ENST00000545584 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.57■■□□□ 1.36
CHD4-213ENST00000545584 FRMPD3Q5JV73 1810 aa23.56■■□□□ 1.36
CHD4-213ENST00000545584 DNM1LO00429 736 aa23.56■■□□□ 1.36
CHD4-213ENST00000545584 ATP2A1O14983 1001 aa23.56■■□□□ 1.36
CHD4-213ENST00000545584 RANBP6O60518 1105 aaKnown RBP23.56■■□□□ 1.36
CHD4-213ENST00000545584 PRAMEF19Q5SWL8 479 aa23.56■■□□□ 1.36
CHD4-213ENST00000545584 DDX11Q96FC9 970 aa23.56■■□□□ 1.36
CHD4-213ENST00000545584 SENP6Q9GZR1 1112 aaPredicted RBP23.56■■□□□ 1.36
CHD4-213ENST00000545584 PRO3102Q9H379 93 aa23.56■■□□□ 1.36
CHD4-213ENST00000545584 NRBP1Q9UHY1 535 aa23.56■■□□□ 1.36
CHD4-213ENST00000545584 A0A0D9SFI3 127 aa23.55■■□□□ 1.36
CHD4-213ENST00000545584 A0A1W2PPC1 479 aa23.55■■□□□ 1.36
CHD4-213ENST00000545584 IGHDP01880 384 aa23.55■■□□□ 1.36
CHD4-213ENST00000545584 FDX1P10109 184 aa23.55■■□□□ 1.36
CHD4-213ENST00000545584 ZNF792Q3KQV3 632 aa23.55■■□□□ 1.36
CHD4-213ENST00000545584 TINF2Q9BSI4 451 aa23.55■■□□□ 1.36
CHD4-213ENST00000545584 SLC38A10Q9HBR0 1119 aa23.55■■□□□ 1.36
CHD4-213ENST00000545584 TOMM22Q9NS69 142 aa23.55■■□□□ 1.36
CHD4-213ENST00000545584 SLC1A4P43007 532 aa23.54■■□□□ 1.36
CHD4-213ENST00000545584 MFAP1P55081 439 aaKnown RBP23.54■■□□□ 1.36
CHD4-213ENST00000545584 NUCB1Q02818 461 aa23.54■■□□□ 1.36
CHD4-213ENST00000545584 IKQ13123 557 aaPredicted RBP23.54■■□□□ 1.36
CHD4-213ENST00000545584 NMIQ13287 307 aaPredicted RBP23.54■■□□□ 1.36
CHD4-213ENST00000545584 ANO1Q5XXA6 986 aa23.54■■□□□ 1.36
CHD4-213ENST00000545584 FAM160B2Q86V87 743 aa23.54■■□□□ 1.36
CHD4-213ENST00000545584 CHURC1Q8WUH1 139 aa23.54■■□□□ 1.36
CHD4-213ENST00000545584 RAVER2Q9HCJ3 691 aaKnown RBP23.54■■□□□ 1.36
CHD4-213ENST00000545584 TMEM232C9JQI7 657 aa23.53■■□□□ 1.36
CHD4-213ENST00000545584 KBTBD13C9JR72 458 aa23.53■■□□□ 1.36
CHD4-213ENST00000545584 ORC4O43929 436 aa23.53■■□□□ 1.36
CHD4-213ENST00000545584 FGAP02671 866 aa23.53■■□□□ 1.36
CHD4-213ENST00000545584 MYCNP04198 464 aaPredicted RBP23.53■■□□□ 1.36
CHD4-213ENST00000545584 SYN1P17600 705 aa23.53■■□□□ 1.36
CHD4-213ENST00000545584 STAT2P52630 851 aa23.53■■□□□ 1.36
CHD4-213ENST00000545584 OAZ1P54368 228 aa23.53■■□□□ 1.36
CHD4-213ENST00000545584 LRRC26Q2I0M4 334 aa23.53■■□□□ 1.36
CHD4-213ENST00000545584 GMCL1Q96IK5 515 aa23.53■■□□□ 1.36
CHD4-213ENST00000545584 INCENPQ9NQS7 918 aa23.53■■□□□ 1.36
CHD4-213ENST00000545584 FBXO40Q9UH90 709 aa23.53■■□□□ 1.36
CHD4-213ENST00000545584 RIPK3Q9Y572 518 aa23.53■■□□□ 1.36
CHD4-213ENST00000545584 HSPD1P10809 573 aaKnown RBP23.52■■□□□ 1.36
CHD4-213ENST00000545584 GJC2Q5T442 439 aaPredicted RBP23.52■■□□□ 1.36
CHD4-213ENST00000545584 PLEKHM2Q8IWE5 1019 aa23.52■■□□□ 1.36
CHD4-213ENST00000545584 CHST13Q8NET6 341 aa23.52■■□□□ 1.36
CHD4-213ENST00000545584 OSBPL3Q9H4L5 887 aa23.52■■□□□ 1.36
CHD4-213ENST00000545584 CNPY2Q9Y2B0 182 aa23.52■■□□□ 1.36
CHD4-213ENST00000545584 CCDC171Q6TFL3 1326 aa23.52■■□□□ 1.36
CHD4-213ENST00000545584 MCCP23508 829 aa23.51■■□□□ 1.35
CHD4-213ENST00000545584 RRP12Q5JTH9 1297 aaKnown RBP23.51■■□□□ 1.35
CHD4-213ENST00000545584 MSL3Q8N5Y2 521 aaKnown RBP23.51■■□□□ 1.35
CHD4-213ENST00000545584 STAG1Q8WVM7 1258 aa23.51■■□□□ 1.35
CHD4-213ENST00000545584 GDF15Q99988 308 aa23.51■■□□□ 1.35
CHD4-213ENST00000545584 IL17RBQ9NRM6 502 aa23.51■■□□□ 1.35
CHD4-213ENST00000545584 PLXNA1Q9UIW2 1896 aa23.51■■□□□ 1.35
CHD4-213ENST00000545584 NMT2O60551 498 aa23.5■■□□□ 1.35
CHD4-213ENST00000545584 FGRP09769 529 aa23.5■■□□□ 1.35
CHD4-213ENST00000545584 RARBP10826 455 aa23.5■■□□□ 1.35
CHD4-213ENST00000545584 SDSP20132 328 aa23.5■■□□□ 1.35
CHD4-213ENST00000545584 BMP8BP34820 402 aa23.5■■□□□ 1.35
CHD4-213ENST00000545584 ATN1P54259 1190 aaPredicted RBP23.5■■□□□ 1.35
CHD4-213ENST00000545584 RCSD1Q6JBY9 416 aa23.5■■□□□ 1.35
CHD4-213ENST00000545584 ZNF589Q86UQ0 364 aaPredicted RBP23.5■■□□□ 1.35
CHD4-213ENST00000545584 ANKRD35Q8N283 1001 aa23.5■■□□□ 1.35
CHD4-213ENST00000545584 CHMP4CQ96CF2 233 aa23.5■■□□□ 1.35
CHD4-213ENST00000545584 SUPT16HQ9Y5B9 1047 aaKnown RBP23.5■■□□□ 1.35
CHD4-213ENST00000545584 ZMYM6O95789 1325 aa23.5■■□□□ 1.35
CHD4-213ENST00000545584 PLA2G6O60733 806 aa23.49■■□□□ 1.35
CHD4-213ENST00000545584 DNAJC25-GNG10A0A024R161 153 aa23.48■■□□□ 1.35
CHD4-213ENST00000545584 PCP11498 1178 aaKnown RBP23.48■■□□□ 1.35
CHD4-213ENST00000545584 AKR1A1P14550 325 aa23.48■■□□□ 1.35
CHD4-213ENST00000545584 KCTD1Q719H9 257 aa23.48■■□□□ 1.35
CHD4-213ENST00000545584 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.48■■□□□ 1.35
CHD4-213ENST00000545584 XPNPEP3Q9NQH7 507 aa23.48■■□□□ 1.35
CHD4-213ENST00000545584 DIAPH3Q9NSV4 1193 aa23.48■■□□□ 1.35
CHD4-213ENST00000545584 MTMR7Q9Y216 660 aa23.48■■□□□ 1.35
CHD4-213ENST00000545584 TACC3Q9Y6A5 838 aa23.48■■□□□ 1.35
CHD4-213ENST00000545584 HIP1O00291 1037 aa23.47■■□□□ 1.35
CHD4-213ENST00000545584 MAGEA10P43363 369 aaPredicted RBP23.47■■□□□ 1.35
CHD4-213ENST00000545584 HAND2P61296 217 aa23.47■■□□□ 1.35
CHD4-213ENST00000545584 LRRC41Q15345 812 aa23.47■■□□□ 1.35
CHD4-213ENST00000545584 CCDC96Q2M329 555 aa23.47■■□□□ 1.35
CHD4-213ENST00000545584 MFSD6Q6ZSS7 791 aa23.47■■□□□ 1.35
CHD4-213ENST00000545584 ZNF467Q7Z7K2 595 aaPredicted RBP23.47■■□□□ 1.35
CHD4-213ENST00000545584 RNF41Q9H4P4 317 aaPredicted RBP23.47■■□□□ 1.35
CHD4-213ENST00000545584 HOMER2Q9NSB8 354 aa23.47■■□□□ 1.35
CHD4-213ENST00000545584 SYNGAP1Q96PV0 1343 aa23.47■■□□□ 1.35
CHD4-213ENST00000545584 ZNF865P0CJ78 1059 aaPredicted RBP23.46■■□□□ 1.35
CHD4-213ENST00000545584 TAL1P17542 331 aaPredicted RBP23.46■■□□□ 1.35
CHD4-213ENST00000545584 NOVP48745 357 aa23.46■■□□□ 1.35
CHD4-213ENST00000545584 TKFCQ3LXA3 575 aa23.46■■□□□ 1.35
CHD4-213ENST00000545584 MAMDC4Q6UXC1 1216 aa23.46■■□□□ 1.35
CHD4-213ENST00000545584 RNF180Q86T96 592 aa23.46■■□□□ 1.35
CHD4-213ENST00000545584 DCAF4Q8WV16 495 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms