RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 PODXL2Q9NZ53 605 aa14.07□□□□□ -0.16
PAAF1-215ENST00000544909 TFCP2L1Q9NZI6 479 aa14.07□□□□□ -0.16
PAAF1-215ENST00000544909 ANKIB1Q9P2G1 1089 aa14.07□□□□□ -0.16
PAAF1-215ENST00000544909 MYO3BQ8WXR4 1341 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 NUTM2BA6NNL0 878 aaPredicted RBP14.06□□□□□ -0.16
PAAF1-215ENST00000544909 NUTM2EB1AL46 878 aaPredicted RBP14.06□□□□□ -0.16
PAAF1-215ENST00000544909 NMT2O60551 498 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 RHOBTB3O94955 611 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 KIF20AO95235 890 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 MCM7P33993 719 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 RFC4P35249 363 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 STAT6P42226 847 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 TRAPPC3LQ5T215 181 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 GPR161Q8N6U8 529 aaKnown RBP14.06□□□□□ -0.16
PAAF1-215ENST00000544909 NEDD1Q8NHV4 660 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 CCDC47Q96A33 483 aaKnown RBP14.06□□□□□ -0.16
PAAF1-215ENST00000544909 THAP9Q9H5L6 903 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 KBTBD4Q9NVX7 518 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 SRP68Q9UHB9 627 aaKnown RBP14.06□□□□□ -0.16
PAAF1-215ENST00000544909 MRFAP1Q9Y605 127 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 GAKO14976 1311 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 WNT7AO00755 349 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 TUBBP07437 444 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 USP17L8P0C7I0 530 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 FOXR2Q6PJQ5 311 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 KIFC2Q96AC6 838 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 RTFDC1Q9BY42 306 aaPredicted RBP14.06□□□□□ -0.16
PAAF1-215ENST00000544909 ZMYND15Q9H091 742 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 ADGRG1Q9Y653 693 aa14.06□□□□□ -0.16
PAAF1-215ENST00000544909 STXBP3O00186 592 aa14.05□□□□□ -0.16
PAAF1-215ENST00000544909 PSMA7O14818 248 aa14.05□□□□□ -0.16
PAAF1-215ENST00000544909 KIF5CO60282 957 aa14.05□□□□□ -0.16
PAAF1-215ENST00000544909 CYP2D6P10635 497 aa14.05□□□□□ -0.16
PAAF1-215ENST00000544909 RASA1P20936 1047 aa14.05□□□□□ -0.16
PAAF1-215ENST00000544909 UBA7P41226 1012 aa14.05□□□□□ -0.16
PAAF1-215ENST00000544909 GNG11P61952 73 aa14.05□□□□□ -0.16
PAAF1-215ENST00000544909 KRT31Q15323 416 aa14.05□□□□□ -0.16
PAAF1-215ENST00000544909 TCP11X2Q5H9J9 407 aa14.05□□□□□ -0.16
PAAF1-215ENST00000544909 TXNRD3Q86VQ6 643 aa14.05□□□□□ -0.16
PAAF1-215ENST00000544909 ADSSL1Q8N142 457 aa14.05□□□□□ -0.16
PAAF1-215ENST00000544909 RETREG2Q8NC44 543 aa14.05□□□□□ -0.16
PAAF1-215ENST00000544909 RABGGTAQ92696 567 aa14.05□□□□□ -0.16
PAAF1-215ENST00000544909 DHTKD1Q96HY7 919 aaPredicted RBP14.05□□□□□ -0.16
PAAF1-215ENST00000544909 SNED1Q8TER0 1413 aa14.05□□□□□ -0.16
PAAF1-215ENST00000544909 LRRC37AA6NMS7 1700 aa14.05□□□□□ -0.16
PAAF1-215ENST00000544909 hCG_1642624A0A1W2PR95 340 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 POTEB2H3BUK9 544 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 BBOX1O75936 387 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 URI1O94763 535 aaPredicted RBP14.04□□□□□ -0.16
PAAF1-215ENST00000544909 ADKP55263 362 aaKnown RBP14.04□□□□□ -0.16
PAAF1-215ENST00000544909 CBX1P83916 185 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 IL17AQ16552 155 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 ERCC6LQ2NKX8 1250 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 ARHGAP29Q52LW3 1261 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 RRAGBQ5VZM2 374 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 CYP26C1Q6V0L0 522 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 ZNF662Q6ZS27 426 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 SH3RF3Q8TEJ3 882 aaPredicted RBP14.04□□□□□ -0.16
PAAF1-215ENST00000544909 NGLY1Q96IV0 654 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 MTRQ99707 1265 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 C6orf50Q9HD87 102 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 PCDHA6Q9UN73 950 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 CTNND2Q9UQB3 1225 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 PCDHA8Q9Y5H6 950 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 FOCADQ5VW36 1801 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 FAM205AQ6ZU69 1335 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 BICDL2A1A5D9 508 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 N4BP3O15049 544 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 NPHP1O15259 732 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 GYPCP04921 128 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 HOXA10P31260 410 aaPredicted RBP14.04□□□□□ -0.16
PAAF1-215ENST00000544909 COPB1P53618 953 aaKnown RBP14.04□□□□□ -0.16
PAAF1-215ENST00000544909 AMPD3Q01432 767 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 RBL2Q08999 1139 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 NAA30Q147X3 362 aaPredicted RBP14.04□□□□□ -0.16
PAAF1-215ENST00000544909 KLHL10Q6JEL2 608 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 PPP1R18Q6NYC8 613 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 TOGARAM2Q6ZUX3 1019 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 FAM114A1Q8IWE2 563 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 GIMAP8Q8ND71 665 aaPredicted RBP14.04□□□□□ -0.16
PAAF1-215ENST00000544909 NELFBQ8WX92 580 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 TMEM47Q9BQJ4 181 aa14.04□□□□□ -0.16
PAAF1-215ENST00000544909 ABCB11O95342 1321 aa14.03□□□□□ -0.16
PAAF1-215ENST00000544909 CDK5RAP2Q96SN8 1893 aa14.03□□□□□ -0.16
PAAF1-215ENST00000544909 KCNJ18B7U540 433 aa14.03□□□□□ -0.16
PAAF1-215ENST00000544909 TEX33O43247 280 aa14.03□□□□□ -0.16
PAAF1-215ENST00000544909 PARP1P09874 1014 aaKnown RBP14.03□□□□□ -0.16
PAAF1-215ENST00000544909 KCNJ12Q14500 433 aa14.03□□□□□ -0.16
PAAF1-215ENST00000544909 NFIXQ14938 502 aa14.03□□□□□ -0.16
PAAF1-215ENST00000544909 NONOQ15233 471 aaKnown RBP eCLIP14.03□□□□□ -0.16
PAAF1-215ENST00000544909 NAALADL2Q58DX5 795 aa14.03□□□□□ -0.16
PAAF1-215ENST00000544909 RSRC2Q7L4I2 434 aaKnown RBP14.03□□□□□ -0.16
PAAF1-215ENST00000544909 MSL3Q8N5Y2 521 aaKnown RBP14.03□□□□□ -0.16
PAAF1-215ENST00000544909 CEP112Q8N8E3 955 aa14.03□□□□□ -0.16
PAAF1-215ENST00000544909 ABHD10Q9NUJ1 306 aa14.03□□□□□ -0.16
PAAF1-215ENST00000544909 LGALS16A8MUM7 142 aa14.02□□□□□ -0.16
PAAF1-215ENST00000544909 SLC26A4O43511 780 aa14.02□□□□□ -0.16
PAAF1-215ENST00000544909 CYTH3O43739 400 aa14.02□□□□□ -0.16
PAAF1-215ENST00000544909 ZRANB2O95218 330 aaKnown RBP eCLIP14.02□□□□□ -0.16
PAAF1-215ENST00000544909 OR52Z1P0C646 297 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms