RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 RPS26P11Q5JNZ5 115 aaPredicted RBP7.94□□□□□ -1.14
CPSF7-222ENST00000544585 OLFM4Q6UX06 510 aa7.94□□□□□ -1.14
CPSF7-222ENST00000544585 SAPCD2Q86UD0 394 aa7.94□□□□□ -1.14
CPSF7-222ENST00000544585 TMEM102Q8N9M5 508 aaPredicted RBP7.94□□□□□ -1.14
CPSF7-222ENST00000544585 BHLHE41Q9C0J9 482 aaPredicted RBP7.94□□□□□ -1.14
CPSF7-222ENST00000544585 ADARB2Q9NS39 739 aaKnown RBP7.94□□□□□ -1.14
CPSF7-222ENST00000544585 PGAP2Q9UHJ9 254 aa7.94□□□□□ -1.14
CPSF7-222ENST00000544585 SAMM50Q9Y512 469 aa7.94□□□□□ -1.14
CPSF7-222ENST00000544585 TIAM2Q8IVF5 1701 aa7.94□□□□□ -1.14
CPSF7-222ENST00000544585 FAM187AA6NFU0 413 aa7.93□□□□□ -1.14
CPSF7-222ENST00000544585 FAM177BA6PVY3 158 aa7.93□□□□□ -1.14
CPSF7-222ENST00000544585 ERVV-1B6SEH8 477 aa7.93□□□□□ -1.14
CPSF7-222ENST00000544585 KCNQ3O43525 872 aa7.93□□□□□ -1.14
CPSF7-222ENST00000544585 MAN1A2O60476 641 aa7.93□□□□□ -1.14
CPSF7-222ENST00000544585 AOC2O75106 756 aa7.93□□□□□ -1.14
CPSF7-222ENST00000544585 CELF2O95319 508 aaKnown RBP7.93□□□□□ -1.14
CPSF7-222ENST00000544585 TFE3P19532 575 aaPredicted RBP7.93□□□□□ -1.14
CPSF7-222ENST00000544585 CRY2Q49AN0 593 aa7.93□□□□□ -1.14
CPSF7-222ENST00000544585 SEZ6Q53EL9 994 aa7.93□□□□□ -1.14
CPSF7-222ENST00000544585 TNNI3KQ59H18 835 aa7.93□□□□□ -1.14
CPSF7-222ENST00000544585 CDC37L1Q7L3B6 337 aa7.93□□□□□ -1.14
CPSF7-222ENST00000544585 TRIM46Q7Z4K8 759 aa7.93□□□□□ -1.14
CPSF7-222ENST00000544585 SLITRK4Q8IW52 837 aa7.93□□□□□ -1.14
CPSF7-222ENST00000544585 TRIM42Q8IWZ5 723 aa7.93□□□□□ -1.14
CPSF7-222ENST00000544585 RTF1Q92541 710 aaKnown RBP7.93□□□□□ -1.14
CPSF7-222ENST00000544585 RPGRQ92834 1020 aaKnown RBP7.93□□□□□ -1.14
CPSF7-222ENST00000544585 NXPE3Q969Y0 559 aa7.93□□□□□ -1.14
CPSF7-222ENST00000544585 RBM17Q96I25 401 aaKnown RBP7.93□□□□□ -1.14
CPSF7-222ENST00000544585 CRAMP1Q96RY5 1269 aa7.93□□□□□ -1.14
CPSF7-222ENST00000544585 VIRMAQ69YN4 1812 aaKnown RBP7.93□□□□□ -1.14
CPSF7-222ENST00000544585 PDE2AO00408 941 aaPredicted RBP7.92□□□□□ -1.14
CPSF7-222ENST00000544585 TRAF5O00463 557 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 MCM4P33991 863 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 CRKP46108 304 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 NRLP54845 237 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 PPP2R3AQ06190 1150 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 NOGQ13253 232 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 RNF187Q5TA31 235 aaPredicted RBP7.92□□□□□ -1.14
CPSF7-222ENST00000544585 CCDC81Q6ZN84 652 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 LRP10Q7Z4F1 713 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 RAB44Q7Z6P3 723 aaPredicted RBP7.92□□□□□ -1.14
CPSF7-222ENST00000544585 NIM1KQ8IY84 436 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 SUPT20HQ8NEM7 779 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 DEPDC7Q96QD5 511 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 HHIPQ96QV1 700 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 CRBNQ96SW2 442 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 SLC30A3Q99726 388 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 ZNF576Q9H609 170 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 TMEM39AQ9NV64 488 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 SNTG2Q9NY99 539 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 GPRC5DQ9NZD1 345 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 CLSPNQ9HAW4 1339 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 ANKRD31Q8N7Z5 1873 aa7.92□□□□□ -1.14
CPSF7-222ENST00000544585 SMAD7O15105 426 aaKnown RBP7.91□□□□□ -1.14
CPSF7-222ENST00000544585 TLR3O15455 904 aaKnown RBP7.91□□□□□ -1.14
CPSF7-222ENST00000544585 HTATSF1O43719 755 aaKnown RBP7.91□□□□□ -1.14
CPSF7-222ENST00000544585 AVPP01185 164 aa7.91□□□□□ -1.14
CPSF7-222ENST00000544585 IBSPP21815 317 aaPredicted RBP7.91□□□□□ -1.14
CPSF7-222ENST00000544585 PIP4K2AP48426 406 aaPredicted RBP7.91□□□□□ -1.14
CPSF7-222ENST00000544585 CHMP4BP1P59074 171 aa7.91□□□□□ -1.14
CPSF7-222ENST00000544585 GRIN2CQ14957 1233 aa7.91□□□□□ -1.14
CPSF7-222ENST00000544585 TNIP1Q15025 636 aa7.91□□□□□ -1.14
CPSF7-222ENST00000544585 HLFQ16534 295 aa7.91□□□□□ -1.14
CPSF7-222ENST00000544585 CWF19L2Q2TBE0 894 aaKnown RBP7.91□□□□□ -1.14
CPSF7-222ENST00000544585 FBXW10Q5XX13 1052 aa7.91□□□□□ -1.14
CPSF7-222ENST00000544585 CCDC84Q86UT8 332 aaPredicted RBP7.91□□□□□ -1.14
CPSF7-222ENST00000544585 SHDQ96IW2 340 aa7.91□□□□□ -1.14
CPSF7-222ENST00000544585 FERD3LQ96RJ6 166 aa7.91□□□□□ -1.14
CPSF7-222ENST00000544585 RBSNQ9H1K0 784 aa7.91□□□□□ -1.14
CPSF7-222ENST00000544585 MIR1-1HGQ9H1L0 117 aa7.91□□□□□ -1.14
CPSF7-222ENST00000544585 ZNRF3Q9ULT6 936 aa7.91□□□□□ -1.14
CPSF7-222ENST00000544585 PPT2Q9UMR5 302 aa7.91□□□□□ -1.14
CPSF7-222ENST00000544585 NUDCQ9Y266 331 aa7.91□□□□□ -1.14
CPSF7-222ENST00000544585 KIF7Q2M1P5 1343 aa7.91□□□□□ -1.14
CPSF7-222ENST00000544585 CEMIPQ8WUJ3 1361 aa7.91□□□□□ -1.14
CPSF7-222ENST00000544585 H7C1D1 291 aa7.9□□□□□ -1.14
CPSF7-222ENST00000544585 ENPP3O14638 875 aa7.9□□□□□ -1.14
CPSF7-222ENST00000544585 PPIP5K2O43314 1243 aa7.9□□□□□ -1.14
CPSF7-222ENST00000544585 BNIP3LO60238 219 aa7.9□□□□□ -1.14
CPSF7-222ENST00000544585 PAGE1O75459 146 aa7.9□□□□□ -1.14
CPSF7-222ENST00000544585 BBOX1O75936 387 aa7.9□□□□□ -1.14
CPSF7-222ENST00000544585 GHRHP01286 108 aa7.9□□□□□ -1.14
CPSF7-222ENST00000544585 THBS1P07996 1170 aa7.9□□□□□ -1.14
CPSF7-222ENST00000544585 CD33P20138 364 aa7.9□□□□□ -1.14
CPSF7-222ENST00000544585 CXCL9Q07325 125 aa7.9□□□□□ -1.14
CPSF7-222ENST00000544585 TAF7Q15545 349 aaPredicted RBP7.9□□□□□ -1.14
CPSF7-222ENST00000544585 PTPROQ16827 1216 aa7.9□□□□□ -1.14
CPSF7-222ENST00000544585 CIAPIN1Q6FI81 312 aa7.9□□□□□ -1.14
CPSF7-222ENST00000544585 GATAD2BQ8WXI9 593 aa7.9□□□□□ -1.14
CPSF7-222ENST00000544585 JARID2Q92833 1246 aaPredicted RBP7.9□□□□□ -1.14
CPSF7-222ENST00000544585 PHACTR3Q96KR7 559 aa7.9□□□□□ -1.14
CPSF7-222ENST00000544585 RNPC3Q96LT9 517 aaKnown RBP7.9□□□□□ -1.14
CPSF7-222ENST00000544585 PBX4Q9BYU1 374 aa7.9□□□□□ -1.14
CPSF7-222ENST00000544585 CDHR2Q9BYE9 1310 aa7.89□□□□□ -1.15
CPSF7-222ENST00000544585 hCG_2014768A0A024R1R8 64 aa7.89□□□□□ -1.15
CPSF7-222ENST00000544585 PRAMEF22A3QJZ6 481 aa7.89□□□□□ -1.15
CPSF7-222ENST00000544585 F13A1P00488 732 aa7.89□□□□□ -1.15
CPSF7-222ENST00000544585 ZNF165P49910 485 aa7.89□□□□□ -1.15
CPSF7-222ENST00000544585 ZNF157P51786 506 aaPredicted RBP7.89□□□□□ -1.15
CPSF7-222ENST00000544585 IGBP1P78318 339 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms