RNA–Protein interactions for RNA: ENST00000544487.5

CCDC189-207, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 2,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-207ENST00000544487 PTPN21Q16825 1174 aa23.79■■□□□ 1.4
CCDC189-207ENST00000544487 CDC42EP5Q6NZY7 148 aa23.79■■□□□ 1.4
CCDC189-207ENST00000544487 UBA5Q9GZZ9 404 aa23.79■■□□□ 1.4
CCDC189-207ENST00000544487 ZMYND12Q9H0C1 365 aa23.79■■□□□ 1.4
CCDC189-207ENST00000544487 SEC63Q9UGP8 760 aaKnown RBP23.79■■□□□ 1.4
CCDC189-207ENST00000544487 FRMPD2Q68DX3 1309 aaPredicted RBP23.79■■□□□ 1.4
CCDC189-207ENST00000544487 TMEM232C9JQI7 657 aa23.78■■□□□ 1.4
CCDC189-207ENST00000544487 SFPQP23246 707 aaKnown RBP eCLIP23.78■■□□□ 1.4
CCDC189-207ENST00000544487 LONP1P36776 959 aaKnown RBP23.78■■□□□ 1.4
CCDC189-207ENST00000544487 LRRC47Q8N1G4 583 aaKnown RBP23.78■■□□□ 1.4
CCDC189-207ENST00000544487 TEKT1Q969V4 418 aa23.78■■□□□ 1.4
CCDC189-207ENST00000544487 PIGSQ96S52 555 aa23.78■■□□□ 1.4
CCDC189-207ENST00000544487 SERPINB13Q9UIV8 391 aa23.78■■□□□ 1.4
CCDC189-207ENST00000544487 PDHBP11177 359 aa23.78■■□□□ 1.4
CCDC189-207ENST00000544487 APOBEC3HQ6NTF7 200 aaKnown RBP23.78■■□□□ 1.4
CCDC189-207ENST00000544487 PDXDC2PQ6P474 469 aa23.78■■□□□ 1.4
CCDC189-207ENST00000544487 C2CD5Q86YS7 1000 aa23.78■■□□□ 1.4
CCDC189-207ENST00000544487 GSDMAQ96QA5 445 aa23.78■■□□□ 1.4
CCDC189-207ENST00000544487 MYH8P13535 1937 aa23.78■■□□□ 1.4
CCDC189-207ENST00000544487 ZNF18P17022 549 aa23.77■■□□□ 1.4
CCDC189-207ENST00000544487 HHIPL2Q6UWX4 724 aa23.77■■□□□ 1.4
CCDC189-207ENST00000544487 CCDC12Q8WUD4 166 aaPredicted RBP23.77■■□□□ 1.4
CCDC189-207ENST00000544487 BLZF1Q9H2G9 400 aa23.77■■□□□ 1.4
CCDC189-207ENST00000544487 TMEM60Q9H2L4 133 aa23.77■■□□□ 1.4
CCDC189-207ENST00000544487 INTS13Q9NVM9 706 aa23.77■■□□□ 1.4
CCDC189-207ENST00000544487 SMCO2A6NFE2 343 aa23.77■■□□□ 1.4
CCDC189-207ENST00000544487 DYNC1I1O14576 645 aa23.77■■□□□ 1.4
CCDC189-207ENST00000544487 CD44P16070 742 aaKnown RBP23.77■■□□□ 1.4
CCDC189-207ENST00000544487 CDK11BP21127 795 aaKnown RBP23.77■■□□□ 1.4
CCDC189-207ENST00000544487 ERCC5P28715 1186 aaPredicted RBP23.77■■□□□ 1.4
CCDC189-207ENST00000544487 SMYD4Q8IYR2 804 aaPredicted RBP23.77■■□□□ 1.4
CCDC189-207ENST00000544487 TNNT1P13805 278 aa23.76■■□□□ 1.39
CCDC189-207ENST00000544487 NFIAQ12857 509 aa23.76■■□□□ 1.39
CCDC189-207ENST00000544487 KLHL10Q6JEL2 608 aa23.76■■□□□ 1.39
CCDC189-207ENST00000544487 DTHD1Q6ZMT9 781 aa23.76■■□□□ 1.39
CCDC189-207ENST00000544487 VSTM4Q8IW00 320 aa23.76■■□□□ 1.39
CCDC189-207ENST00000544487 FAM177A1Q8N128 213 aaPredicted RBP23.76■■□□□ 1.39
CCDC189-207ENST00000544487 MTRQ99707 1265 aa23.76■■□□□ 1.39
CCDC189-207ENST00000544487 SAMSN1Q9NSI8 373 aaKnown RBP23.76■■□□□ 1.39
CCDC189-207ENST00000544487 ZNF219Q9P2Y4 722 aaPredicted RBP23.76■■□□□ 1.39
CCDC189-207ENST00000544487 SMARCA1P28370 1054 aa23.75■■□□□ 1.39
CCDC189-207ENST00000544487 PYM1Q9BRP8 204 aaKnown RBP23.75■■□□□ 1.39
CCDC189-207ENST00000544487 C6orf50Q9HD87 102 aa23.75■■□□□ 1.39
CCDC189-207ENST00000544487 TRMT1Q9NXH9 659 aaKnown RBP23.75■■□□□ 1.39
CCDC189-207ENST00000544487 IGKV6D-41A0A0C4DH26 115 aa23.75■■□□□ 1.39
CCDC189-207ENST00000544487 TXLNAP40222 546 aa23.75■■□□□ 1.39
CCDC189-207ENST00000544487 CRKP46108 304 aa23.75■■□□□ 1.39
CCDC189-207ENST00000544487 KARSQ15046 597 aaKnown RBP23.75■■□□□ 1.39
CCDC189-207ENST00000544487 PODNQ7Z5L7 613 aa23.75■■□□□ 1.39
CCDC189-207ENST00000544487 PP2D1A8MPX8 630 aa23.74■■□□□ 1.39
CCDC189-207ENST00000544487 SLURP2P0DP57 97 aa23.74■■□□□ 1.39
CCDC189-207ENST00000544487 SHMT1P34896 483 aa23.74■■□□□ 1.39
CCDC189-207ENST00000544487 CUL4BQ13620 913 aa23.74■■□□□ 1.39
CCDC189-207ENST00000544487 KIAA0825Q8IV33 1275 aa23.74■■□□□ 1.39
CCDC189-207ENST00000544487 RIOX1Q9H6W3 641 aa23.74■■□□□ 1.39
CCDC189-207ENST00000544487 SWAP70Q9UH65 585 aa23.74■■□□□ 1.39
CCDC189-207ENST00000544487 PCDHAC2Q9Y5I4 1007 aa23.74■■□□□ 1.39
CCDC189-207ENST00000544487 H0YIN7 160 aa23.74■■□□□ 1.39
CCDC189-207ENST00000544487 GNA11P29992 359 aa23.74■■□□□ 1.39
CCDC189-207ENST00000544487 STX17P56962 302 aa23.74■■□□□ 1.39
CCDC189-207ENST00000544487 RBM10P98175 930 aaKnown RBP23.74■■□□□ 1.39
CCDC189-207ENST00000544487 SOGA3Q5TF21 947 aa23.74■■□□□ 1.39
CCDC189-207ENST00000544487 CCAR2Q8N163 923 aaKnown RBP23.74■■□□□ 1.39
CCDC189-207ENST00000544487 RIOK3O14730 519 aaKnown RBP23.73■■□□□ 1.39
CCDC189-207ENST00000544487 TTLL1O95922 423 aa23.73■■□□□ 1.39
CCDC189-207ENST00000544487 KRT25Q7Z3Z0 450 aa23.73■■□□□ 1.39
CCDC189-207ENST00000544487 ZFPM1Q8IX07 1006 aa23.73■■□□□ 1.39
CCDC189-207ENST00000544487 SYNRGQ9UMZ2 1314 aa23.73■■□□□ 1.39
CCDC189-207ENST00000544487 PPP1R3GB7ZBB8 358 aa23.72■■□□□ 1.39
CCDC189-207ENST00000544487 STAT6P42226 847 aa23.72■■□□□ 1.39
CCDC189-207ENST00000544487 CACNB3P54284 484 aa23.72■■□□□ 1.39
CCDC189-207ENST00000544487 DHX8Q14562 1220 aaKnown RBP23.72■■□□□ 1.39
CCDC189-207ENST00000544487 NONOQ15233 471 aaKnown RBP eCLIP23.72■■□□□ 1.39
CCDC189-207ENST00000544487 LETM2Q2VYF4 491 aa23.72■■□□□ 1.39
CCDC189-207ENST00000544487 GPCPD1Q9NPB8 672 aa23.72■■□□□ 1.39
CCDC189-207ENST00000544487 MPHOSPH10O00566 681 aaKnown RBP23.72■■□□□ 1.39
CCDC189-207ENST00000544487 CCNT1O60563 726 aaKnown RBP23.72■■□□□ 1.39
CCDC189-207ENST00000544487 HLA-DOAP06340 250 aa23.72■■□□□ 1.39
CCDC189-207ENST00000544487 CHRNA5P30532 468 aa23.72■■□□□ 1.39
CCDC189-207ENST00000544487 GTF2F1P35269 517 aaKnown RBP eCLIP23.72■■□□□ 1.39
CCDC189-207ENST00000544487 ASPRV1Q53RT3 343 aa23.72■■□□□ 1.39
CCDC189-207ENST00000544487 CT47A1Q5JQC4 288 aaPredicted RBP23.72■■□□□ 1.39
CCDC189-207ENST00000544487 TSC1Q92574 1164 aa23.72■■□□□ 1.39
CCDC189-207ENST00000544487 DISC1Q9NRI5 854 aa23.72■■□□□ 1.39
CCDC189-207ENST00000544487 SLX4Q8IY92 1834 aa23.71■■□□□ 1.39
CCDC189-207ENST00000544487 GTPBP6O43824 516 aaPredicted RBP23.71■■□□□ 1.39
CCDC189-207ENST00000544487 SNHG28P0DPA3 235 aa23.71■■□□□ 1.39
CCDC189-207ENST00000544487 SPATA1Q5VX52 437 aa23.71■■□□□ 1.39
CCDC189-207ENST00000544487 RASSF8Q8NHQ8 419 aa23.71■■□□□ 1.39
CCDC189-207ENST00000544487 ZDHHC15Q96MV8 337 aa23.71■■□□□ 1.39
CCDC189-207ENST00000544487 BIN2Q9UBW5 565 aaPredicted RBP23.71■■□□□ 1.39
CCDC189-207ENST00000544487 LAD1O00515 517 aa23.71■■□□□ 1.39
CCDC189-207ENST00000544487 ECE2O60344 883 aa23.71■■□□□ 1.39
CCDC189-207ENST00000544487 GOLGA8FQ08AF8 430 aa23.71■■□□□ 1.39
CCDC189-207ENST00000544487 GOLGA8DPQ0D2H9 430 aa23.71■■□□□ 1.39
CCDC189-207ENST00000544487 E4F1Q66K89 784 aaPredicted RBP23.71■■□□□ 1.39
CCDC189-207ENST00000544487 STYK1Q6J9G0 422 aa23.71■■□□□ 1.39
CCDC189-207ENST00000544487 MYO3BQ8WXR4 1341 aa23.7■■□□□ 1.38
CCDC189-207ENST00000544487 RBM5P52756 815 aaKnown RBP eCLIP23.7■■□□□ 1.38
CCDC189-207ENST00000544487 ATP2B2Q01814 1243 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms