RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 USP17L22D6RA61 530 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 USP17L17D6RBQ6 530 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 USP17L19D6RCP7 530 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 USP17L20D6RJB6 530 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 GTF2F1P35269 517 aaKnown RBP eCLIP4.26□□□□□ -1.73
BRCA2-206ENST00000544455 ATP2C1P98194 919 aaPredicted RBP4.26□□□□□ -1.73
BRCA2-206ENST00000544455 USP17L24Q0WX57 530 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 USH1GQ495M9 461 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 SBK1Q52WX2 424 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 SPTY2D1Q68D10 685 aaPredicted RBP4.26□□□□□ -1.73
BRCA2-206ENST00000544455 USP17L6PQ6QN14 398 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 LEMD3Q9Y2U8 911 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 GDF11O95390 407 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 FXR1P51114 621 aaKnown RBP eCLIP4.26□□□□□ -1.73
BRCA2-206ENST00000544455 ZYXQ15942 572 aaKnown RBP4.26□□□□□ -1.73
BRCA2-206ENST00000544455 CCDC96Q2M329 555 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 CCDC84Q86UT8 332 aaPredicted RBP4.26□□□□□ -1.73
BRCA2-206ENST00000544455 CABP7Q86V35 215 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 C4orf32Q8N8J7 132 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 GLIS3Q8NEA6 775 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 BPIFA3Q9BQP9 254 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 SEMA3EO15041 775 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 APBA1Q02410 837 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 GRM4Q14833 912 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 SPECC1LQ69YQ0 1117 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 SPICE1Q8N0Z3 855 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 KANSL2Q9H9L4 492 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 CLRN2A0PK11 232 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 GSTO1P78417 241 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 UBXN1Q04323 297 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 NAALADL2Q58DX5 795 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 TMEM139Q8IV31 216 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 NELFBQ8WX92 580 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 SLC39A2Q9NP94 309 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 HOOK1Q9UJC3 728 aaKnown RBP4.26□□□□□ -1.73
BRCA2-206ENST00000544455 DDTLA6NHG4 134 aaPredicted RBP4.26□□□□□ -1.73
BRCA2-206ENST00000544455 USP17L10C9JJH3 530 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 E2F4Q16254 413 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 RAD9BQ6WBX8 426 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 KRT27Q7Z3Y8 459 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 MLKLQ8NB16 471 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 ZC3H12CQ9C0D7 883 aaKnown RBP4.26□□□□□ -1.73
BRCA2-206ENST00000544455 OSBPL5Q9H0X9 879 aaPredicted RBP4.26□□□□□ -1.73
BRCA2-206ENST00000544455 PPP1R11O60927 126 aaPredicted RBP4.26□□□□□ -1.73
BRCA2-206ENST00000544455 KIF5BP33176 963 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 GSDMDP57764 484 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 AOC3Q16853 763 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 PDXDC2PQ6P474 469 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 NPHP3-ACAD11A0A0J9YXS1 232 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 FAM237AA0A1B0GTK4 181 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 JAG1P78504 1218 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 PAK1Q13153 545 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 RRP36Q96EU6 259 aaKnown RBP4.26□□□□□ -1.73
BRCA2-206ENST00000544455 SRRTQ9BXP5 876 aaKnown RBP4.26□□□□□ -1.73
BRCA2-206ENST00000544455 RNF216Q9NWF9 866 aaPredicted RBP4.26□□□□□ -1.73
BRCA2-206ENST00000544455 BARHL2Q9NY43 387 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 SNED1Q8TER0 1413 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 CBFA2T2O43439 604 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 CAVIN2O95810 425 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 MMP10P09238 476 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 TNNI2P48788 182 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 KMT5BQ4FZB7 885 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 DTHD1Q6ZMT9 781 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 CCDC155Q8N6L0 562 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 CCDC150Q8NCX0 1101 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 CCDC12Q8WUD4 166 aaPredicted RBP4.25□□□□□ -1.73
BRCA2-206ENST00000544455 CARD6Q9BX69 1037 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 IMPACTQ9P2X3 320 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 IKQ13123 557 aaPredicted RBP4.25□□□□□ -1.73
BRCA2-206ENST00000544455 DGKZQ13574 1117 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 C16orf86Q6ZW13 317 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 KCNK18Q7Z418 384 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 SH3RF1Q7Z6J0 888 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 CDAN1Q8IWY9 1227 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 IGSF22Q8N9C0 903 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 PUF60Q9UHX1 559 aaKnown RBP4.25□□□□□ -1.73
BRCA2-206ENST00000544455 C4AP0C0L4 1744 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 C4BP0C0L5 1744 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 RPN1P04843 607 aaKnown RBP4.25□□□□□ -1.73
BRCA2-206ENST00000544455 ZNF18P17022 549 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 GNG11P61952 73 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 CCDC178Q5BJE1 867 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 CDC42EP5Q6NZY7 148 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 NID2Q14112 1375 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 TCP10L2B9ZVM9 353 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 ENC1O14682 589 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 N4BP3O15049 544 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 ADGRF4Q8IZF3 695 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 TRIM47Q96LD4 638 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 FGFBP2Q9BYJ0 223 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 PDHBP11177 359 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 PDE4DQ08499 809 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 SOGA3Q5TF21 947 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 FBXO38Q6PIJ6 1188 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 IQUBQ8NA54 791 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 ENOX1Q8TC92 643 aaKnown RBP4.25□□□□□ -1.73
BRCA2-206ENST00000544455 DNAJC18Q9H819 358 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 KCNJ18B7U540 433 aa4.25□□□□□ -1.73
BRCA2-206ENST00000544455 SSBP05455 408 aaKnown RBP eCLIP4.25□□□□□ -1.73
BRCA2-206ENST00000544455 LDHCP07864 332 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms