RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 ANKLE1Q8NAG6 615 aa27.46■■□□□ 1.99
CHFR-222ENST00000544093 CHURC1Q8WUH1 139 aa27.46■■□□□ 1.99
CHFR-222ENST00000544093 ESR2Q92731 530 aa27.46■■□□□ 1.99
CHFR-222ENST00000544093 TACC3Q9Y6A5 838 aa27.46■■□□□ 1.99
CHFR-222ENST00000544093 PLA2G6O60733 806 aa27.45■■□□□ 1.98
CHFR-222ENST00000544093 STAT2P52630 851 aa27.45■■□□□ 1.98
CHFR-222ENST00000544093 OAZ1P54368 228 aa27.45■■□□□ 1.98
CHFR-222ENST00000544093 CACNB2Q08289 660 aaPredicted RBP27.45■■□□□ 1.98
CHFR-222ENST00000544093 IMMTQ16891 758 aaKnown RBP27.45■■□□□ 1.98
CHFR-222ENST00000544093 OLFML2BQ68BL8 750 aa27.45■■□□□ 1.98
CHFR-222ENST00000544093 KIFC2Q96AC6 838 aa27.45■■□□□ 1.98
CHFR-222ENST00000544093 ZNFX1Q9P2E3 1918 aaKnown RBP27.44■■□□□ 1.98
CHFR-222ENST00000544093 NMT2O60551 498 aa27.44■■□□□ 1.98
CHFR-222ENST00000544093 FARP2O94887 1054 aaPredicted RBP27.44■■□□□ 1.98
CHFR-222ENST00000544093 KCTD2Q14681 263 aa27.44■■□□□ 1.98
CHFR-222ENST00000544093 CENPQQ7L2Z9 268 aaPredicted RBP27.44■■□□□ 1.98
CHFR-222ENST00000544093 UBE2Q1Q7Z7E8 422 aa27.44■■□□□ 1.98
CHFR-222ENST00000544093 TTC14Q96N46 770 aa27.44■■□□□ 1.98
CHFR-222ENST00000544093 NBPF3Q9H094 633 aa27.44■■□□□ 1.98
CHFR-222ENST00000544093 SLC38A10Q9HBR0 1119 aa27.44■■□□□ 1.98
CHFR-222ENST00000544093 TOP1P11387 765 aaKnown RBP27.43■■□□□ 1.98
CHFR-222ENST00000544093 TBC1D10CQ8IV04 446 aa27.43■■□□□ 1.98
CHFR-222ENST00000544093 MMP19Q99542 508 aa27.43■■□□□ 1.98
CHFR-222ENST00000544093 HTATIP2Q9BUP3 242 aa27.43■■□□□ 1.98
CHFR-222ENST00000544093 ISY1Q9ULR0 285 aaKnown RBP27.43■■□□□ 1.98
CHFR-222ENST00000544093 TMEM232C9JQI7 657 aa27.42■■□□□ 1.98
CHFR-222ENST00000544093 MCCP23508 829 aa27.42■■□□□ 1.98
CHFR-222ENST00000544093 CCDC178Q5BJE1 867 aa27.42■■□□□ 1.98
CHFR-222ENST00000544093 SNRNP48Q6IEG0 339 aaKnown RBP27.42■■□□□ 1.98
CHFR-222ENST00000544093 RCSD1Q6JBY9 416 aa27.42■■□□□ 1.98
CHFR-222ENST00000544093 NPLOC4Q8TAT6 608 aa27.42■■□□□ 1.98
CHFR-222ENST00000544093 DCAF4Q8WV16 495 aa27.42■■□□□ 1.98
CHFR-222ENST00000544093 MSCO60682 206 aa27.41■■□□□ 1.98
CHFR-222ENST00000544093 CHMLP26374 656 aa27.41■■□□□ 1.98
CHFR-222ENST00000544093 IKQ13123 557 aaPredicted RBP27.41■■□□□ 1.98
CHFR-222ENST00000544093 FLRT1Q9NZU1 646 aa27.41■■□□□ 1.98
CHFR-222ENST00000544093 DIS3Q9Y2L1 958 aaKnown RBP27.41■■□□□ 1.98
CHFR-222ENST00000544093 IGHA2P01877 340 aa27.4■■□□□ 1.98
CHFR-222ENST00000544093 IQCA1Q86XH1 822 aa27.4■■□□□ 1.98
CHFR-222ENST00000544093 CNNM2Q9H8M5 875 aa27.4■■□□□ 1.98
CHFR-222ENST00000544093 FBXO40Q9UH90 709 aa27.4■■□□□ 1.98
CHFR-222ENST00000544093 OGDHLQ9ULD0 1010 aa27.4■■□□□ 1.98
CHFR-222ENST00000544093 COBLO75128 1261 aa27.39■■□□□ 1.98
CHFR-222ENST00000544093 TMEM47Q9BQJ4 181 aa27.39■■□□□ 1.98
CHFR-222ENST00000544093 KRT23Q9C075 422 aa27.39■■□□□ 1.98
CHFR-222ENST00000544093 NEDD4P46934 1319 aa27.39■■□□□ 1.97
CHFR-222ENST00000544093 PLXNA1Q9UIW2 1896 aa27.38■■□□□ 1.97
CHFR-222ENST00000544093 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.38■■□□□ 1.97
CHFR-222ENST00000544093 DGKHQ86XP1 1220 aa27.38■■□□□ 1.97
CHFR-222ENST00000544093 CPXCR1Q8N123 301 aa27.38■■□□□ 1.97
CHFR-222ENST00000544093 CHST13Q8NET6 341 aa27.38■■□□□ 1.97
CHFR-222ENST00000544093 MAML3Q96JK9 1138 aa27.38■■□□□ 1.97
CHFR-222ENST00000544093 CCND3P30281 292 aaPredicted RBP27.37■■□□□ 1.97
CHFR-222ENST00000544093 NECAB2Q7Z6G3 386 aa27.37■■□□□ 1.97
CHFR-222ENST00000544093 NRBP1Q9UHY1 535 aa27.37■■□□□ 1.97
CHFR-222ENST00000544093 CYP2C19P33261 490 aa27.36■■□□□ 1.97
CHFR-222ENST00000544093 CCDC96Q2M329 555 aa27.36■■□□□ 1.97
CHFR-222ENST00000544093 KCTD1Q719H9 257 aa27.36■■□□□ 1.97
CHFR-222ENST00000544093 IL25Q9H293 177 aa27.36■■□□□ 1.97
CHFR-222ENST00000544093 RAVER2Q9HCJ3 691 aaKnown RBP27.36■■□□□ 1.97
CHFR-222ENST00000544093 KDM4AO75164 1064 aa27.35■■□□□ 1.97
CHFR-222ENST00000544093 CYBAP13498 195 aa27.35■■□□□ 1.97
CHFR-222ENST00000544093 TKFCQ3LXA3 575 aa27.35■■□□□ 1.97
CHFR-222ENST00000544093 MSL3Q8N5Y2 521 aaKnown RBP27.35■■□□□ 1.97
CHFR-222ENST00000544093 DDX11Q96FC9 970 aa27.35■■□□□ 1.97
CHFR-222ENST00000544093 RIPK3Q9Y572 518 aa27.35■■□□□ 1.97
CHFR-222ENST00000544093 SGSM2O43147 1006 aa27.34■■□□□ 1.97
CHFR-222ENST00000544093 ZNF792Q3KQV3 632 aa27.34■■□□□ 1.97
CHFR-222ENST00000544093 LHX8Q68G74 356 aa27.34■■□□□ 1.97
CHFR-222ENST00000544093 BTNL9Q6UXG8 535 aa27.34■■□□□ 1.97
CHFR-222ENST00000544093 DPF3Q92784 378 aa27.34■■□□□ 1.97
CHFR-222ENST00000544093 DDX20Q9UHI6 824 aaKnown RBP27.34■■□□□ 1.97
CHFR-222ENST00000544093 PRR12Q9ULL5 1215 aa27.34■■□□□ 1.97
CHFR-222ENST00000544093 U3KPZ7 1027 aaPredicted RBP27.34■■□□□ 1.97
CHFR-222ENST00000544093 FRMPD3Q5JV73 1810 aa27.34■■□□□ 1.97
CHFR-222ENST00000544093 PGK2P07205 417 aa27.33■■□□□ 1.97
CHFR-222ENST00000544093 CNGA1P29973 690 aa27.33■■□□□ 1.97
CHFR-222ENST00000544093 PAWRQ96IZ0 340 aaKnown RBP27.33■■□□□ 1.97
CHFR-222ENST00000544093 PNMA2Q9UL42 364 aa27.33■■□□□ 1.97
CHFR-222ENST00000544093 MTMR7Q9Y216 660 aa27.33■■□□□ 1.97
CHFR-222ENST00000544093 B4E1Z4 1266 aa27.32■■□□□ 1.96
CHFR-222ENST00000544093 PDHBP11177 359 aa27.32■■□□□ 1.96
CHFR-222ENST00000544093 SLC4A3P48751 1232 aa27.32■■□□□ 1.96
CHFR-222ENST00000544093 TRDNQ13061 729 aa27.32■■□□□ 1.96
CHFR-222ENST00000544093 ANKRD35Q8N283 1001 aa27.32■■□□□ 1.96
CHFR-222ENST00000544093 ANKS1AQ92625 1134 aa27.32■■□□□ 1.96
CHFR-222ENST00000544093 ZSCAN10Q96SZ4 725 aaPredicted RBP27.32■■□□□ 1.96
CHFR-222ENST00000544093 TINF2Q9BSI4 451 aa27.32■■□□□ 1.96
CHFR-222ENST00000544093 ACAD9Q9H845 621 aa27.32■■□□□ 1.96
CHFR-222ENST00000544093 GPATCH4Q5T3I0 446 aaKnown RBP27.31■■□□□ 1.96
CHFR-222ENST00000544093 UBAC1Q9BSL1 405 aa27.31■■□□□ 1.96
CHFR-222ENST00000544093 ZSWIM5Q9P217 1185 aa27.31■■□□□ 1.96
CHFR-222ENST00000544093 NR2E3Q9Y5X4 410 aa27.31■■□□□ 1.96
CHFR-222ENST00000544093 CEP290O15078 2479 aa27.3■■□□□ 1.96
CHFR-222ENST00000544093 DNAJC25-GNG10A0A024R161 153 aa27.3■■□□□ 1.96
CHFR-222ENST00000544093 SEPT4O43236 478 aa27.3■■□□□ 1.96
CHFR-222ENST00000544093 SNHG28P0DPA3 235 aa27.3■■□□□ 1.96
CHFR-222ENST00000544093 BMP2KLQ5H9B9 411 aa27.3■■□□□ 1.96
CHFR-222ENST00000544093 ZNF467Q7Z7K2 595 aaPredicted RBP27.3■■□□□ 1.96
CHFR-222ENST00000544093 CHMP4CQ96CF2 233 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms