RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 KINO60870 393 aaKnown RBP22.73■■□□□ 1.23
COPS7A-218ENST00000543939 ATP2B1P20020 1258 aa22.73■■□□□ 1.23
COPS7A-218ENST00000543939 TRAPPC10P48553 1259 aa22.73■■□□□ 1.23
COPS7A-218ENST00000543939 TNNI2P48788 182 aa22.73■■□□□ 1.23
COPS7A-218ENST00000543939 MAP3K10Q02779 954 aa22.73■■□□□ 1.23
COPS7A-218ENST00000543939 SLFN13Q68D06 897 aa22.73■■□□□ 1.23
COPS7A-218ENST00000543939 TTBK2Q6IQ55 1244 aa22.73■■□□□ 1.23
COPS7A-218ENST00000543939 PIK3AP1Q6ZUJ8 805 aa22.73■■□□□ 1.23
COPS7A-218ENST00000543939 ZNF713Q8N859 430 aaPredicted RBP22.73■■□□□ 1.23
COPS7A-218ENST00000543939 KRI1Q8N9T8 703 aaKnown RBP22.73■■□□□ 1.23
COPS7A-218ENST00000543939 GMCL1P1Q8NEA9 526 aa22.73■■□□□ 1.23
COPS7A-218ENST00000543939 CNOT7Q9UIV1 285 aaKnown RBP22.73■■□□□ 1.23
COPS7A-218ENST00000543939 CTAGE5O15320 804 aa22.72■■□□□ 1.23
COPS7A-218ENST00000543939 PTPREP23469 700 aa22.72■■□□□ 1.23
COPS7A-218ENST00000543939 NAPAP54920 295 aa22.72■■□□□ 1.23
COPS7A-218ENST00000543939 SHC4Q6S5L8 630 aa22.72■■□□□ 1.23
COPS7A-218ENST00000543939 ADGRF4Q8IZF3 695 aa22.72■■□□□ 1.23
COPS7A-218ENST00000543939 JMJD4Q9H9V9 463 aa22.72■■□□□ 1.23
COPS7A-218ENST00000543939 FBXO2Q9UK22 296 aaPredicted RBP22.72■■□□□ 1.23
COPS7A-218ENST00000543939 SYNPO2Q9UMS6 1093 aa22.72■■□□□ 1.23
COPS7A-218ENST00000543939 WNT7AO00755 349 aa22.71■■□□□ 1.23
COPS7A-218ENST00000543939 PFKFB1P16118 471 aa22.71■■□□□ 1.23
COPS7A-218ENST00000543939 TTC38Q5R3I4 469 aa22.71■■□□□ 1.23
COPS7A-218ENST00000543939 RESP18Q5W5W9 173 aa22.71■■□□□ 1.23
COPS7A-218ENST00000543939 ARHGAP27Q6ZUM4 889 aa22.71■■□□□ 1.23
COPS7A-218ENST00000543939 KCTD1Q719H9 257 aa22.71■■□□□ 1.23
COPS7A-218ENST00000543939 MTMR8Q96EF0 704 aa22.71■■□□□ 1.23
COPS7A-218ENST00000543939 CLIC6Q96NY7 704 aa22.71■■□□□ 1.23
COPS7A-218ENST00000543939 PCDHA6Q9UN73 950 aa22.71■■□□□ 1.23
COPS7A-218ENST00000543939 HPSEQ9Y251 543 aa22.71■■□□□ 1.23
COPS7A-218ENST00000543939 PCDHA8Q9Y5H6 950 aa22.71■■□□□ 1.23
COPS7A-218ENST00000543939 ESYT2A0FGR8 921 aa22.71■■□□□ 1.23
COPS7A-218ENST00000543939 BMP15O95972 392 aa22.71■■□□□ 1.23
COPS7A-218ENST00000543939 RASA3Q14644 834 aa22.71■■□□□ 1.23
COPS7A-218ENST00000543939 SAMD7Q7Z3H4 446 aa22.71■■□□□ 1.23
COPS7A-218ENST00000543939 CKAP2LQ8IYA6 745 aa22.71■■□□□ 1.23
COPS7A-218ENST00000543939 PNMA6FA0A0J9YX94 578 aa22.7■■□□□ 1.22
COPS7A-218ENST00000543939 F5H6K3 240 aa22.7■■□□□ 1.22
COPS7A-218ENST00000543939 CCDC192P0DO97 292 aa22.7■■□□□ 1.22
COPS7A-218ENST00000543939 LMNB1P20700 586 aa22.7■■□□□ 1.22
COPS7A-218ENST00000543939 SLC1A4P43007 532 aa22.7■■□□□ 1.22
COPS7A-218ENST00000543939 KLRC3Q07444 240 aa22.7■■□□□ 1.22
COPS7A-218ENST00000543939 TNFAIP1Q13829 316 aa22.7■■□□□ 1.22
COPS7A-218ENST00000543939 GMCL1Q96IK5 515 aa22.7■■□□□ 1.22
COPS7A-218ENST00000543939 ZBTB21Q9ULJ3 1066 aa22.7■■□□□ 1.22
COPS7A-218ENST00000543939 SRPRBQ9Y5M8 271 aaKnown RBP22.7■■□□□ 1.22
COPS7A-218ENST00000543939 SLC16A2P36021 539 aa22.69■■□□□ 1.22
COPS7A-218ENST00000543939 TBC1D10BQ4KMP7 808 aaPredicted RBP22.69■■□□□ 1.22
COPS7A-218ENST00000543939 ZNF579Q8NAF0 562 aaKnown RBP22.69■■□□□ 1.22
COPS7A-218ENST00000543939 RASGRP4Q8TDF6 673 aa22.69■■□□□ 1.22
COPS7A-218ENST00000543939 C6orf50Q9HD87 102 aa22.69■■□□□ 1.22
COPS7A-218ENST00000543939 ATAD5Q96QE3 1844 aa22.68■■□□□ 1.22
COPS7A-218ENST00000543939 A0A1W2PRG0 241 aa22.68■■□□□ 1.22
COPS7A-218ENST00000543939 SMCO2A6NFE2 343 aa22.68■■□□□ 1.22
COPS7A-218ENST00000543939 ZNF202O95125 648 aa22.68■■□□□ 1.22
COPS7A-218ENST00000543939 NDUFB10O96000 172 aa22.68■■□□□ 1.22
COPS7A-218ENST00000543939 GNA11P29992 359 aa22.68■■□□□ 1.22
COPS7A-218ENST00000543939 KIF4BQ2VIQ3 1234 aa22.68■■□□□ 1.22
COPS7A-218ENST00000543939 MIGA2Q7L4E1 593 aa22.68■■□□□ 1.22
COPS7A-218ENST00000543939 TEPSINQ96N21 525 aa22.68■■□□□ 1.22
COPS7A-218ENST00000543939 USP17L10C9JJH3 530 aa22.68■■□□□ 1.22
COPS7A-218ENST00000543939 GRIN1Q05586 938 aa22.68■■□□□ 1.22
COPS7A-218ENST00000543939 TYRO3Q06418 890 aa22.68■■□□□ 1.22
COPS7A-218ENST00000543939 ZNF174Q15697 407 aa22.68■■□□□ 1.22
COPS7A-218ENST00000543939 RNF214Q8ND24 703 aa22.68■■□□□ 1.22
COPS7A-218ENST00000543939 MRVI1Q9Y6F6 885 aa22.68■■□□□ 1.22
COPS7A-218ENST00000543939 CCDC194A0A1B0GVG4 234 aa22.67■■□□□ 1.22
COPS7A-218ENST00000543939 ZBTB5O15062 677 aa22.67■■□□□ 1.22
COPS7A-218ENST00000543939 RAD21O60216 631 aa22.67■■□□□ 1.22
COPS7A-218ENST00000543939 CAP2P40123 477 aa22.67■■□□□ 1.22
COPS7A-218ENST00000543939 ARHGEF10LQ9HCE6 1279 aa22.67■■□□□ 1.22
COPS7A-218ENST00000543939 SCAF8Q9UPN6 1271 aaKnown RBP22.67■■□□□ 1.22
COPS7A-218ENST00000543939 ASTN2O75129 1339 aaPredicted RBP22.67■■□□□ 1.22
COPS7A-218ENST00000543939 PPP1R11O60927 126 aaPredicted RBP22.66■■□□□ 1.22
COPS7A-218ENST00000543939 SYKP43405 635 aa22.66■■□□□ 1.22
COPS7A-218ENST00000543939 ATP2C1P98194 919 aaPredicted RBP22.66■■□□□ 1.22
COPS7A-218ENST00000543939 PPP1R18Q6NYC8 613 aa22.66■■□□□ 1.22
COPS7A-218ENST00000543939 COA7Q96BR5 231 aa22.66■■□□□ 1.22
COPS7A-218ENST00000543939 TIGD1Q96MW7 591 aa22.66■■□□□ 1.22
COPS7A-218ENST00000543939 HACL1Q9UJ83 578 aa22.66■■□□□ 1.22
COPS7A-218ENST00000543939 TMX2Q9Y320 296 aa22.66■■□□□ 1.22
COPS7A-218ENST00000543939 KRT25Q7Z3Z0 450 aa22.65■■□□□ 1.22
COPS7A-218ENST00000543939 H7C1D1 291 aa22.65■■□□□ 1.22
COPS7A-218ENST00000543939 ECE1P42892 770 aa22.65■■□□□ 1.22
COPS7A-218ENST00000543939 SASS6Q6UVJ0 657 aa22.65■■□□□ 1.22
COPS7A-218ENST00000543939 GPC2Q8N158 579 aa22.65■■□□□ 1.22
COPS7A-218ENST00000543939 ACER1Q8TDN7 264 aa22.65■■□□□ 1.22
COPS7A-218ENST00000543939 FERMT2Q96AC1 680 aa22.65■■□□□ 1.22
COPS7A-218ENST00000543939 SDF4Q9BRK5 362 aa22.65■■□□□ 1.22
COPS7A-218ENST00000543939 PHF20L1A8MW92 1017 aa22.64■■□□□ 1.21
COPS7A-218ENST00000543939 BMP3P12645 472 aa22.64■■□□□ 1.21
COPS7A-218ENST00000543939 PTGDRQ13258 359 aa22.64■■□□□ 1.21
COPS7A-218ENST00000543939 NUP88Q99567 741 aaPredicted RBP22.64■■□□□ 1.21
COPS7A-218ENST00000543939 SYT17Q9BSW7 474 aa22.64■■□□□ 1.21
COPS7A-218ENST00000543939 GPRC5DQ9NZD1 345 aa22.64■■□□□ 1.21
COPS7A-218ENST00000543939 KCNH3Q9ULD8 1083 aa22.64■■□□□ 1.21
COPS7A-218ENST00000543939 MCM7P33993 719 aa22.63■■□□□ 1.21
COPS7A-218ENST00000543939 SPECC1Q5M775 1068 aa22.63■■□□□ 1.21
COPS7A-218ENST00000543939 BTNL9Q6UXG8 535 aa22.63■■□□□ 1.21
COPS7A-218ENST00000543939 CSRNP2Q9H175 543 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms