RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 CCDC194A0A1B0GVG4 234 aa15.79■□□□□ 0.12
MSH2-206ENST00000543555 ZNF592Q92610 1267 aa15.79■□□□□ 0.12
MSH2-206ENST00000543555 SAMSN1Q9NSI8 373 aaKnown RBP15.79■□□□□ 0.12
MSH2-206ENST00000543555 PCDHA6Q9UN73 950 aa15.79■□□□□ 0.12
MSH2-206ENST00000543555 PCDHA8Q9Y5H6 950 aa15.79■□□□□ 0.12
MSH2-206ENST00000543555 KLRF2D3W0D1 207 aa15.79■□□□□ 0.12
MSH2-206ENST00000543555 GOLGA8HP0CJ92 632 aa15.79■□□□□ 0.12
MSH2-206ENST00000543555 CD44P16070 742 aaKnown RBP15.79■□□□□ 0.12
MSH2-206ENST00000543555 LONP1P36776 959 aaKnown RBP15.79■□□□□ 0.12
MSH2-206ENST00000543555 CUL4BQ13620 913 aa15.79■□□□□ 0.12
MSH2-206ENST00000543555 PDXDC2PQ6P474 469 aa15.79■□□□□ 0.12
MSH2-206ENST00000543555 C2CD5Q86YS7 1000 aa15.79■□□□□ 0.12
MSH2-206ENST00000543555 FAM177A1Q8N128 213 aaPredicted RBP15.79■□□□□ 0.12
MSH2-206ENST00000543555 SPZ1Q9BXG8 430 aa15.79■□□□□ 0.12
MSH2-206ENST00000543555 GTF2IP78347 998 aa15.78■□□□□ 0.12
MSH2-206ENST00000543555 PTPN21Q16825 1174 aa15.78■□□□□ 0.12
MSH2-206ENST00000543555 PPP1R13BQ96KQ4 1090 aa15.78■□□□□ 0.12
MSH2-206ENST00000543555 TMX1Q9H3N1 280 aa15.78■□□□□ 0.12
MSH2-206ENST00000543555 DAGLAQ9Y4D2 1042 aa15.78■□□□□ 0.12
MSH2-206ENST00000543555 KIF2AO00139 706 aaPredicted RBP15.78■□□□□ 0.12
MSH2-206ENST00000543555 RASGRP2Q7LDG7 609 aa15.78■□□□□ 0.12
MSH2-206ENST00000543555 SYNRGQ9UMZ2 1314 aa15.78■□□□□ 0.12
MSH2-206ENST00000543555 SRGNP10124 158 aa15.78■□□□□ 0.12
MSH2-206ENST00000543555 TBX2Q13207 712 aaPredicted RBP15.78■□□□□ 0.12
MSH2-206ENST00000543555 SPATA1Q5VX52 437 aa15.78■□□□□ 0.12
MSH2-206ENST00000543555 STAMQ92783 540 aa15.78■□□□□ 0.12
MSH2-206ENST00000543555 CEP95Q96GE4 821 aa15.78■□□□□ 0.12
MSH2-206ENST00000543555 ATP6V0A2Q9Y487 856 aa15.78■□□□□ 0.12
MSH2-206ENST00000543555 PARP1P09874 1014 aaKnown RBP15.77■□□□□ 0.12
MSH2-206ENST00000543555 KLHL10Q6JEL2 608 aa15.77■□□□□ 0.12
MSH2-206ENST00000543555 COA1Q9GZY4 146 aa15.77■□□□□ 0.12
MSH2-206ENST00000543555 PPP1R3GB7ZBB8 358 aa15.77■□□□□ 0.11
MSH2-206ENST00000543555 NOVP48745 357 aa15.77■□□□□ 0.11
MSH2-206ENST00000543555 RIMBP2O15034 1052 aa15.76■□□□□ 0.11
MSH2-206ENST00000543555 TXLNAP40222 546 aa15.76■□□□□ 0.11
MSH2-206ENST00000543555 SMYD4Q8IYR2 804 aaPredicted RBP15.76■□□□□ 0.11
MSH2-206ENST00000543555 MTRQ99707 1265 aa15.76■□□□□ 0.11
MSH2-206ENST00000543555 CPVLQ9H3G5 476 aa15.76■□□□□ 0.11
MSH2-206ENST00000543555 MYH1P12882 1939 aa15.76■□□□□ 0.11
MSH2-206ENST00000543555 GTPBP6O43824 516 aaPredicted RBP15.76■□□□□ 0.11
MSH2-206ENST00000543555 INF2Q27J81 1249 aa15.76■□□□□ 0.11
MSH2-206ENST00000543555 SPECC1LQ69YQ0 1117 aa15.76■□□□□ 0.11
MSH2-206ENST00000543555 USP17L2Q6R6M4 530 aa15.76■□□□□ 0.11
MSH2-206ENST00000543555 ZMYND12Q9H0C1 365 aa15.76■□□□□ 0.11
MSH2-206ENST00000543555 BLZF1Q9H2G9 400 aa15.76■□□□□ 0.11
MSH2-206ENST00000543555 SUGT1Q9Y2Z0 365 aa15.76■□□□□ 0.11
MSH2-206ENST00000543555 GOLGA8FQ08AF8 430 aa15.76■□□□□ 0.11
MSH2-206ENST00000543555 GOLGA8DPQ0D2H9 430 aa15.76■□□□□ 0.11
MSH2-206ENST00000543555 NR1I3Q14994 352 aa15.76■□□□□ 0.11
MSH2-206ENST00000543555 DTHD1Q6ZMT9 781 aa15.76■□□□□ 0.11
MSH2-206ENST00000543555 KIF18AQ8NI77 898 aa15.76■□□□□ 0.11
MSH2-206ENST00000543555 A0A1B0GTH6 734 aa15.75■□□□□ 0.11
MSH2-206ENST00000543555 SMARCA1P28370 1054 aa15.75■□□□□ 0.11
MSH2-206ENST00000543555 NAPAP54920 295 aa15.75■□□□□ 0.11
MSH2-206ENST00000543555 STX17P56962 302 aa15.75■□□□□ 0.11
MSH2-206ENST00000543555 CCDC12Q8WUD4 166 aaPredicted RBP15.75■□□□□ 0.11
MSH2-206ENST00000543555 TMEM60Q9H2L4 133 aa15.75■□□□□ 0.11
MSH2-206ENST00000543555 FOCADQ5VW36 1801 aa15.75■□□□□ 0.11
MSH2-206ENST00000543555 ANKRD31Q8N7Z5 1873 aa15.75■□□□□ 0.11
MSH2-206ENST00000543555 CCP110O43303 1012 aa15.75■□□□□ 0.11
MSH2-206ENST00000543555 CDC25AP30304 524 aa15.75■□□□□ 0.11
MSH2-206ENST00000543555 CDKAL1Q5VV42 579 aa15.75■□□□□ 0.11
MSH2-206ENST00000543555 APTXQ7Z2E3 356 aaKnown RBP15.75■□□□□ 0.11
MSH2-206ENST00000543555 TMEM139Q8IV31 216 aa15.75■□□□□ 0.11
MSH2-206ENST00000543555 RRP36Q96EU6 259 aaKnown RBP15.75■□□□□ 0.11
MSH2-206ENST00000543555 PLIN4Q96Q06 1357 aa15.75■□□□□ 0.11
MSH2-206ENST00000543555 H0YIN7 160 aa15.74■□□□□ 0.11
MSH2-206ENST00000543555 HMGB2P26583 209 aaKnown RBP15.74■□□□□ 0.11
MSH2-206ENST00000543555 PICALMQ13492 652 aa15.74■□□□□ 0.11
MSH2-206ENST00000543555 KARSQ15046 597 aaKnown RBP15.74■□□□□ 0.11
MSH2-206ENST00000543555 SYCP1Q15431 976 aa15.74■□□□□ 0.11
MSH2-206ENST00000543555 HOMER1Q86YM7 354 aa15.74■□□□□ 0.11
MSH2-206ENST00000543555 ANKRD7Q92527 254 aa15.74■□□□□ 0.11
MSH2-206ENST00000543555 LAD1O00515 517 aa15.74■□□□□ 0.11
MSH2-206ENST00000543555 PDE6BP35913 854 aa15.74■□□□□ 0.11
MSH2-206ENST00000543555 STAT6P42226 847 aa15.74■□□□□ 0.11
MSH2-206ENST00000543555 GABPAQ06546 454 aa15.74■□□□□ 0.11
MSH2-206ENST00000543555 CERS5Q8N5B7 392 aa15.74■□□□□ 0.11
MSH2-206ENST00000543555 ZC3H12CQ9C0D7 883 aaKnown RBP15.74■□□□□ 0.11
MSH2-206ENST00000543555 DISC1Q9NRI5 854 aa15.74■□□□□ 0.11
MSH2-206ENST00000543555 F8W031 263 aaPredicted RBP15.73■□□□□ 0.11
MSH2-206ENST00000543555 KRT25Q7Z3Z0 450 aa15.73■□□□□ 0.11
MSH2-206ENST00000543555 FCHSD1Q86WN1 690 aa15.73■□□□□ 0.11
MSH2-206ENST00000543555 SEC63Q9UGP8 760 aaKnown RBP15.73■□□□□ 0.11
MSH2-206ENST00000543555 CTNND2Q9UQB3 1225 aa15.73■□□□□ 0.11
MSH2-206ENST00000543555 ARHGAP6O43182 974 aa15.73■□□□□ 0.11
MSH2-206ENST00000543555 NPR1P16066 1061 aa15.73■□□□□ 0.11
MSH2-206ENST00000543555 PRPHP41219 470 aa15.73■□□□□ 0.11
MSH2-206ENST00000543555 TC2NQ8N9U0 490 aa15.73■□□□□ 0.11
MSH2-206ENST00000543555 C6orf50Q9HD87 102 aa15.73■□□□□ 0.11
MSH2-206ENST00000543555 RMND1Q9NWS8 449 aa15.73■□□□□ 0.11
MSH2-206ENST00000543555 QSER1Q2KHR3 1735 aa15.73■□□□□ 0.11
MSH2-206ENST00000543555 SMCO2A6NFE2 343 aa15.73■□□□□ 0.11
MSH2-206ENST00000543555 USP17L5A8MUK1 530 aa15.73■□□□□ 0.11
MSH2-206ENST00000543555 C21orf2O43822 256 aa15.73■□□□□ 0.11
MSH2-206ENST00000543555 TUBB4AP04350 444 aa15.73■□□□□ 0.11
MSH2-206ENST00000543555 DPEP1P16444 411 aa15.73■□□□□ 0.11
MSH2-206ENST00000543555 GNA11P29992 359 aa15.73■□□□□ 0.11
MSH2-206ENST00000543555 NCBP1Q09161 790 aaKnown RBP15.73■□□□□ 0.11
MSH2-206ENST00000543555 RRAGBQ5VZM2 374 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms