RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 OAZ1P54368 228 aa15.58■□□□□ 0.08
RTN3-213ENST00000543552 ZNF792Q3KQV3 632 aa15.58■□□□□ 0.08
RTN3-213ENST00000543552 TDHQ8IZJ6 230 aa15.58■□□□□ 0.08
RTN3-213ENST00000543552 KIFC2Q96AC6 838 aa15.58■□□□□ 0.08
RTN3-213ENST00000543552 DDX11Q96FC9 970 aa15.58■□□□□ 0.08
RTN3-213ENST00000543552 LBHD1Q9BQE6 289 aaPredicted RBP15.58■□□□□ 0.08
RTN3-213ENST00000543552 FBXO40Q9UH90 709 aa15.58■□□□□ 0.08
RTN3-213ENST00000543552 ISY1Q9ULR0 285 aaKnown RBP15.58■□□□□ 0.08
RTN3-213ENST00000543552 MYCNP04198 464 aaPredicted RBP15.57■□□□□ 0.08
RTN3-213ENST00000543552 BMP3P12645 472 aa15.57■□□□□ 0.08
RTN3-213ENST00000543552 TFAP4Q01664 338 aa15.57■□□□□ 0.08
RTN3-213ENST00000543552 GJC2Q5T442 439 aaPredicted RBP15.57■□□□□ 0.08
RTN3-213ENST00000543552 SLFN13Q68D06 897 aa15.57■□□□□ 0.08
RTN3-213ENST00000543552 GPR153Q6NV75 609 aa15.57■□□□□ 0.08
RTN3-213ENST00000543552 LRRC47Q8N1G4 583 aaKnown RBP15.57■□□□□ 0.08
RTN3-213ENST00000543552 SLC38A10Q9HBR0 1119 aa15.57■□□□□ 0.08
RTN3-213ENST00000543552 HELLSQ9NRZ9 838 aa15.57■□□□□ 0.08
RTN3-213ENST00000543552 PLXNA1Q9UIW2 1896 aa15.57■□□□□ 0.08
RTN3-213ENST00000543552 ZNFX1Q9P2E3 1918 aaKnown RBP15.56■□□□□ 0.08
RTN3-213ENST00000543552 TSPY2A6NKD2 308 aa15.56■□□□□ 0.08
RTN3-213ENST00000543552 AKR1A1P14550 325 aa15.56■□□□□ 0.08
RTN3-213ENST00000543552 STAT2P52630 851 aa15.56■□□□□ 0.08
RTN3-213ENST00000543552 ATN1P54259 1190 aaPredicted RBP15.56■□□□□ 0.08
RTN3-213ENST00000543552 PDE1AP54750 535 aa15.56■□□□□ 0.08
RTN3-213ENST00000543552 RTP1P59025 263 aa15.56■□□□□ 0.08
RTN3-213ENST00000543552 IKQ13123 557 aaPredicted RBP15.56■□□□□ 0.08
RTN3-213ENST00000543552 FAM47AQ5JRC9 791 aa15.56■□□□□ 0.08
RTN3-213ENST00000543552 PRAMEF19Q5SWL8 479 aa15.56■□□□□ 0.08
RTN3-213ENST00000543552 ANO1Q5XXA6 986 aa15.56■□□□□ 0.08
RTN3-213ENST00000543552 RNF180Q86T96 592 aa15.56■□□□□ 0.08
RTN3-213ENST00000543552 FAM160B2Q86V87 743 aa15.56■□□□□ 0.08
RTN3-213ENST00000543552 CPXCR1Q8N123 301 aa15.56■□□□□ 0.08
RTN3-213ENST00000543552 CHURC1Q8WUH1 139 aa15.56■□□□□ 0.08
RTN3-213ENST00000543552 GMCL1Q96IK5 515 aa15.56■□□□□ 0.08
RTN3-213ENST00000543552 XPNPEP3Q9NQH7 507 aa15.56■□□□□ 0.08
RTN3-213ENST00000543552 SYNGAP1Q96PV0 1343 aa15.56■□□□□ 0.08
RTN3-213ENST00000543552 SLC1A4P43007 532 aa15.55■□□□□ 0.08
RTN3-213ENST00000543552 LRRC41Q15345 812 aa15.55■□□□□ 0.08
RTN3-213ENST00000543552 LRIT3Q3SXY7 679 aa15.55■□□□□ 0.08
RTN3-213ENST00000543552 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.55■□□□□ 0.08
RTN3-213ENST00000543552 ZNF467Q7Z7K2 595 aaPredicted RBP15.55■□□□□ 0.08
RTN3-213ENST00000543552 ANKRD35Q8N283 1001 aa15.55■□□□□ 0.08
RTN3-213ENST00000543552 CHST13Q8NET6 341 aa15.55■□□□□ 0.08
RTN3-213ENST00000543552 ANAPC4Q9UJX5 808 aa15.55■□□□□ 0.08
RTN3-213ENST00000543552 STX8Q9UNK0 236 aa15.55■□□□□ 0.08
RTN3-213ENST00000543552 SLC4A3P48751 1232 aa15.54■□□□□ 0.08
RTN3-213ENST00000543552 MFAP1P55081 439 aaKnown RBP15.54■□□□□ 0.08
RTN3-213ENST00000543552 ALX1Q15699 326 aa15.54■□□□□ 0.08
RTN3-213ENST00000543552 SLC39A5Q6ZMH5 540 aa15.54■□□□□ 0.08
RTN3-213ENST00000543552 CCDC129Q6ZRS4 1044 aa15.54■□□□□ 0.08
RTN3-213ENST00000543552 RWDD1Q9H446 243 aaPredicted RBP15.54■□□□□ 0.08
RTN3-213ENST00000543552 ATP11BQ9Y2G3 1177 aa15.54■□□□□ 0.08
RTN3-213ENST00000543552 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.54■□□□□ 0.08
RTN3-213ENST00000543552 DNAJC25-GNG10A0A024R161 153 aa15.53■□□□□ 0.08
RTN3-213ENST00000543552 TMEM232C9JQI7 657 aa15.53■□□□□ 0.08
RTN3-213ENST00000543552 ORC4O43929 436 aa15.53■□□□□ 0.08
RTN3-213ENST00000543552 RANBP6O60518 1105 aaKnown RBP15.53■□□□□ 0.08
RTN3-213ENST00000543552 ADCYAP1R1P41586 468 aa15.53■□□□□ 0.08
RTN3-213ENST00000543552 MDM2Q00987 491 aaPredicted RBP15.53■□□□□ 0.08
RTN3-213ENST00000543552 SNX17Q15036 470 aa15.53■□□□□ 0.08
RTN3-213ENST00000543552 MCMDC2Q4G0Z9 681 aa15.53■□□□□ 0.08
RTN3-213ENST00000543552 C1orf53Q5VUE5 145 aa15.53■□□□□ 0.08
RTN3-213ENST00000543552 MAMDC4Q6UXC1 1216 aa15.53■□□□□ 0.08
RTN3-213ENST00000543552 YTHDC1Q96MU7 727 aaKnown RBP15.53■□□□□ 0.08
RTN3-213ENST00000543552 RAVER2Q9HCJ3 691 aaKnown RBP15.53■□□□□ 0.08
RTN3-213ENST00000543552 FAM184BQ9ULE4 1060 aa15.53■□□□□ 0.08
RTN3-213ENST00000543552 PHF24Q9UPV7 400 aa15.53■□□□□ 0.08
RTN3-213ENST00000543552 RIPK3Q9Y572 518 aa15.53■□□□□ 0.08
RTN3-213ENST00000543552 ZMYM6O95789 1325 aa15.52■□□□□ 0.08
RTN3-213ENST00000543552 TRIM6-TRIM34B2RNG4 842 aa15.52■□□□□ 0.08
RTN3-213ENST00000543552 SOX1O00570 391 aaPredicted RBP15.52■□□□□ 0.08
RTN3-213ENST00000543552 PLA2G6O60733 806 aa15.52■□□□□ 0.08
RTN3-213ENST00000543552 ZNF865P0CJ78 1059 aaPredicted RBP15.52■□□□□ 0.08
RTN3-213ENST00000543552 PCP11498 1178 aaKnown RBP15.52■□□□□ 0.08
RTN3-213ENST00000543552 CTDSPL2Q05D32 466 aa15.52■□□□□ 0.08
RTN3-213ENST00000543552 TKFCQ3LXA3 575 aa15.52■□□□□ 0.08
RTN3-213ENST00000543552 STAG1Q8WVM7 1258 aa15.52■□□□□ 0.08
RTN3-213ENST00000543552 LRCH3Q96II8 777 aa15.52■□□□□ 0.08
RTN3-213ENST00000543552 ACAD9Q9H845 621 aa15.52■□□□□ 0.08
RTN3-213ENST00000543552 TOMM22Q9NS69 142 aa15.52■□□□□ 0.08
RTN3-213ENST00000543552 FOXP2O15409 715 aa15.51■□□□□ 0.07
RTN3-213ENST00000543552 MCCP23508 829 aa15.51■□□□□ 0.07
RTN3-213ENST00000543552 RCSD1Q6JBY9 416 aa15.51■□□□□ 0.07
RTN3-213ENST00000543552 DCAF4Q8WV16 495 aa15.51■□□□□ 0.07
RTN3-213ENST00000543552 FERMT2Q96AC1 680 aa15.51■□□□□ 0.07
RTN3-213ENST00000543552 TSEN34Q9BSV6 310 aaKnown RBP15.51■□□□□ 0.07
RTN3-213ENST00000543552 LNPKQ9C0E8 428 aa15.51■□□□□ 0.07
RTN3-213ENST00000543552 ABHD16BQ9H3Z7 469 aa15.51■□□□□ 0.07
RTN3-213ENST00000543552 SPC25Q9HBM1 224 aa15.51■□□□□ 0.07
RTN3-213ENST00000543552 PRDM5Q9NQX1 630 aaPredicted RBP15.51■□□□□ 0.07
RTN3-213ENST00000543552 HOMER2Q9NSB8 354 aa15.51■□□□□ 0.07
RTN3-213ENST00000543552 ZHX1Q9UKY1 873 aaPredicted RBP15.51■□□□□ 0.07
RTN3-213ENST00000543552 LAMA2P24043 3122 aaKnown RBP15.5■□□□□ 0.07
RTN3-213ENST00000543552 PGK1P00558 417 aa15.5■□□□□ 0.07
RTN3-213ENST00000543552 TAL1P17542 331 aaPredicted RBP15.5■□□□□ 0.07
RTN3-213ENST00000543552 TRIM60Q495X7 471 aa15.5■□□□□ 0.07
RTN3-213ENST00000543552 VPS53Q5VIR6 699 aa15.5■□□□□ 0.07
RTN3-213ENST00000543552 SMC5Q8IY18 1101 aa15.5■□□□□ 0.07
RTN3-213ENST00000543552 NUP133Q8WUM0 1156 aa15.5■□□□□ 0.07
RTN3-213ENST00000543552 CCDC171Q6TFL3 1326 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms