RNA–Protein interactions for RNA: ENST00000541866.5

COPS7A-212, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-212ENST00000541866 FEM1BQ9UK73 627 aa16.99■□□□□ 0.31
COPS7A-212ENST00000541866 CNPY2Q9Y2B0 182 aa16.99■□□□□ 0.31
COPS7A-212ENST00000541866 A0A0G2JMZ2 1700 aa16.99■□□□□ 0.31
COPS7A-212ENST00000541866 ZNF236Q9UL36 1845 aa16.98■□□□□ 0.31
COPS7A-212ENST00000541866 ADCYAP1R1P41586 468 aa16.98■□□□□ 0.31
COPS7A-212ENST00000541866 PPARAQ07869 468 aa16.98■□□□□ 0.31
COPS7A-212ENST00000541866 LRRC41Q15345 812 aa16.98■□□□□ 0.31
COPS7A-212ENST00000541866 FAM47AQ5JRC9 791 aa16.98■□□□□ 0.31
COPS7A-212ENST00000541866 SLFN13Q68D06 897 aa16.98■□□□□ 0.31
COPS7A-212ENST00000541866 GPR153Q6NV75 609 aa16.98■□□□□ 0.31
COPS7A-212ENST00000541866 RNF180Q86T96 592 aa16.98■□□□□ 0.31
COPS7A-212ENST00000541866 LRRC47Q8N1G4 583 aaKnown RBP16.98■□□□□ 0.31
COPS7A-212ENST00000541866 NEDD1Q8NHV4 660 aa16.98■□□□□ 0.31
COPS7A-212ENST00000541866 FERMT2Q96AC1 680 aa16.98■□□□□ 0.31
COPS7A-212ENST00000541866 XPNPEP3Q9NQH7 507 aa16.98■□□□□ 0.31
COPS7A-212ENST00000541866 SYNPO2Q9UMS6 1093 aa16.98■□□□□ 0.31
COPS7A-212ENST00000541866 LAMA3Q16787 3333 aa16.98■□□□□ 0.31
COPS7A-212ENST00000541866 PPP4R3BQ5MIZ7 849 aa16.97■□□□□ 0.31
COPS7A-212ENST00000541866 GMCL1P1Q8NEA9 526 aa16.97■□□□□ 0.31
COPS7A-212ENST00000541866 CRBNQ96SW2 442 aa16.97■□□□□ 0.31
COPS7A-212ENST00000541866 RAVER2Q9HCJ3 691 aaKnown RBP16.97■□□□□ 0.31
COPS7A-212ENST00000541866 RIPK3Q9Y572 518 aa16.97■□□□□ 0.31
COPS7A-212ENST00000541866 ATP2A1O14983 1001 aa16.96■□□□□ 0.31
COPS7A-212ENST00000541866 BMP3P12645 472 aa16.96■□□□□ 0.31
COPS7A-212ENST00000541866 AKR1A1P14550 325 aa16.96■□□□□ 0.31
COPS7A-212ENST00000541866 TAL1P17542 331 aaPredicted RBP16.96■□□□□ 0.31
COPS7A-212ENST00000541866 IKQ13123 557 aaPredicted RBP16.96■□□□□ 0.31
COPS7A-212ENST00000541866 ANKRD35Q8N283 1001 aa16.96■□□□□ 0.31
COPS7A-212ENST00000541866 MSL3Q8N5Y2 521 aaKnown RBP16.96■□□□□ 0.31
COPS7A-212ENST00000541866 DEFB123Q8N688 67 aa16.96■□□□□ 0.31
COPS7A-212ENST00000541866 EVI5LQ96CN4 794 aa16.96■□□□□ 0.31
COPS7A-212ENST00000541866 SLC38A10Q9HBR0 1119 aa16.96■□□□□ 0.31
COPS7A-212ENST00000541866 PRDM5Q9NQX1 630 aaPredicted RBP16.96■□□□□ 0.31
COPS7A-212ENST00000541866 FBXO40Q9UH90 709 aa16.96■□□□□ 0.31
COPS7A-212ENST00000541866 DNAH12Q6ZR08 3092 aa16.95■□□□□ 0.3
COPS7A-212ENST00000541866 TSPY2A6NKD2 308 aa16.95■□□□□ 0.3
COPS7A-212ENST00000541866 PGK1P00558 417 aa16.95■□□□□ 0.3
COPS7A-212ENST00000541866 FDX1P10109 184 aa16.95■□□□□ 0.3
COPS7A-212ENST00000541866 TRIM60Q495X7 471 aa16.95■□□□□ 0.3
COPS7A-212ENST00000541866 CCDC129Q6ZRS4 1044 aa16.95■□□□□ 0.3
COPS7A-212ENST00000541866 CHURC1Q8WUH1 139 aa16.95■□□□□ 0.3
COPS7A-212ENST00000541866 ZNFX1Q9P2E3 1918 aaKnown RBP16.95■□□□□ 0.3
COPS7A-212ENST00000541866 COL11A1P12107 1806 aaPredicted RBP16.94■□□□□ 0.3
COPS7A-212ENST00000541866 FRMPD3Q5JV73 1810 aa16.94■□□□□ 0.3
COPS7A-212ENST00000541866 TMEM232C9JQI7 657 aa16.94■□□□□ 0.3
COPS7A-212ENST00000541866 ZNF865P0CJ78 1059 aaPredicted RBP16.94■□□□□ 0.3
COPS7A-212ENST00000541866 SLC1A4P43007 532 aa16.94■□□□□ 0.3
COPS7A-212ENST00000541866 OAZ1P54368 228 aa16.94■□□□□ 0.3
COPS7A-212ENST00000541866 CHST13Q8NET6 341 aa16.94■□□□□ 0.3
COPS7A-212ENST00000541866 CHMP4CQ96CF2 233 aa16.94■□□□□ 0.3
COPS7A-212ENST00000541866 FAM184BQ9ULE4 1060 aa16.94■□□□□ 0.3
COPS7A-212ENST00000541866 STX8Q9UNK0 236 aa16.94■□□□□ 0.3
COPS7A-212ENST00000541866 PHF24Q9UPV7 400 aa16.94■□□□□ 0.3
COPS7A-212ENST00000541866 DNAJC25-GNG10A0A024R161 153 aa16.93■□□□□ 0.3
COPS7A-212ENST00000541866 RANBP6O60518 1105 aaKnown RBP16.93■□□□□ 0.3
COPS7A-212ENST00000541866 MCCP23508 829 aa16.93■□□□□ 0.3
COPS7A-212ENST00000541866 STAT2P52630 851 aa16.93■□□□□ 0.3
COPS7A-212ENST00000541866 CTDSPL2Q05D32 466 aa16.93■□□□□ 0.3
COPS7A-212ENST00000541866 ZNF467Q7Z7K2 595 aaPredicted RBP16.93■□□□□ 0.3
COPS7A-212ENST00000541866 FAM160B2Q86V87 743 aa16.93■□□□□ 0.3
COPS7A-212ENST00000541866 HELLSQ9NRZ9 838 aa16.93■□□□□ 0.3
COPS7A-212ENST00000541866 ZHX1Q9UKY1 873 aaPredicted RBP16.93■□□□□ 0.3
COPS7A-212ENST00000541866 PARP14Q460N5 1801 aa16.93■□□□□ 0.3
COPS7A-212ENST00000541866 SYNGAP1Q96PV0 1343 aa16.93■□□□□ 0.3
COPS7A-212ENST00000541866 PLIN4Q96Q06 1357 aa16.92■□□□□ 0.3
COPS7A-212ENST00000541866 GREB1LQ9C091 1923 aaPredicted RBP16.92■□□□□ 0.3
COPS7A-212ENST00000541866 SNAI1O95863 264 aaPredicted RBP16.92■□□□□ 0.3
COPS7A-212ENST00000541866 PDE1AP54750 535 aa16.92■□□□□ 0.3
COPS7A-212ENST00000541866 TLE2Q04725 743 aa16.92■□□□□ 0.3
COPS7A-212ENST00000541866 HDAC1Q13547 482 aaPredicted RBP16.92■□□□□ 0.3
COPS7A-212ENST00000541866 SNX17Q15036 470 aa16.92■□□□□ 0.3
COPS7A-212ENST00000541866 C1orf53Q5VUE5 145 aa16.92■□□□□ 0.3
COPS7A-212ENST00000541866 MAMDC4Q6UXC1 1216 aa16.92■□□□□ 0.3
COPS7A-212ENST00000541866 Q7L0L9 218 aa16.92■□□□□ 0.3
COPS7A-212ENST00000541866 STAG1Q8WVM7 1258 aa16.92■□□□□ 0.3
COPS7A-212ENST00000541866 GMCL1Q96IK5 515 aa16.92■□□□□ 0.3
COPS7A-212ENST00000541866 INCENPQ9NQS7 918 aa16.92■□□□□ 0.3
COPS7A-212ENST00000541866 TOMM22Q9NS69 142 aa16.92■□□□□ 0.3
COPS7A-212ENST00000541866 HOMER2Q9NSB8 354 aa16.92■□□□□ 0.3
COPS7A-212ENST00000541866 TACC3Q9Y6A5 838 aa16.92■□□□□ 0.3
COPS7A-212ENST00000541866 SALL3Q9BXA9 1300 aa16.92■□□□□ 0.3
COPS7A-212ENST00000541866 SMCHD1A6NHR9 2005 aa16.91■□□□□ 0.3
COPS7A-212ENST00000541866 VPS53Q5VIR6 699 aa16.91■□□□□ 0.3
COPS7A-212ENST00000541866 LENG1Q96BZ8 264 aaPredicted RBP16.91■□□□□ 0.3
COPS7A-212ENST00000541866 TSEN34Q9BSV6 310 aaKnown RBP16.91■□□□□ 0.3
COPS7A-212ENST00000541866 SPC25Q9HBM1 224 aa16.91■□□□□ 0.3
COPS7A-212ENST00000541866 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.91■□□□□ 0.3
COPS7A-212ENST00000541866 MTMR7Q9Y216 660 aa16.91■□□□□ 0.3
COPS7A-212ENST00000541866 TRIM6-TRIM34B2RNG4 842 aa16.9■□□□□ 0.3
COPS7A-212ENST00000541866 ACVR2BQ13705 512 aa16.9■□□□□ 0.3
COPS7A-212ENST00000541866 MCMDC2Q4G0Z9 681 aa16.9■□□□□ 0.3
COPS7A-212ENST00000541866 RCSD1Q6JBY9 416 aa16.9■□□□□ 0.3
COPS7A-212ENST00000541866 KCTD1Q719H9 257 aa16.9■□□□□ 0.3
COPS7A-212ENST00000541866 NUP133Q8WUM0 1156 aa16.9■□□□□ 0.3
COPS7A-212ENST00000541866 BADQ92934 168 aa16.9■□□□□ 0.3
COPS7A-212ENST00000541866 ABHD16BQ9H3Z7 469 aa16.9■□□□□ 0.3
COPS7A-212ENST00000541866 ACAD9Q9H845 621 aa16.9■□□□□ 0.3
COPS7A-212ENST00000541866 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
COPS7A-212ENST00000541866 MYH4Q9Y623 1939 aa16.9■□□□□ 0.3
COPS7A-212ENST00000541866 A0A1W2PQ45 241 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms