RNA–Protein interactions for RNA: ENST00000541616.1

CACNA2D4-214, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 4

Gene CACNA2D4, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-214ENST00000541616 REPS2Q8NFH8 660 aa20.26■□□□□ 0.83
CACNA2D4-214ENST00000541616 GMCL1Q96IK5 515 aa20.26■□□□□ 0.83
CACNA2D4-214ENST00000541616 TMEM232C9JQI7 657 aa20.25■□□□□ 0.83
CACNA2D4-214ENST00000541616 NMT2O60551 498 aa20.25■□□□□ 0.83
CACNA2D4-214ENST00000541616 CCND3P30281 292 aaPredicted RBP20.25■□□□□ 0.83
CACNA2D4-214ENST00000541616 STAT2P52630 851 aa20.25■□□□□ 0.83
CACNA2D4-214ENST00000541616 SNRNP48Q6IEG0 339 aaKnown RBP20.25■□□□□ 0.83
CACNA2D4-214ENST00000541616 FAM160B2Q86V87 743 aa20.25■□□□□ 0.83
CACNA2D4-214ENST00000541616 CPXCR1Q8N123 301 aa20.25■□□□□ 0.83
CACNA2D4-214ENST00000541616 STAG1Q8WVM7 1258 aa20.25■□□□□ 0.83
CACNA2D4-214ENST00000541616 PAWRQ96IZ0 340 aaKnown RBP20.25■□□□□ 0.83
CACNA2D4-214ENST00000541616 OGDHLQ9ULD0 1010 aa20.25■□□□□ 0.83
CACNA2D4-214ENST00000541616 TACC3Q9Y6A5 838 aa20.25■□□□□ 0.83
CACNA2D4-214ENST00000541616 ZNFX1Q9P2E3 1918 aaKnown RBP20.24■□□□□ 0.83
CACNA2D4-214ENST00000541616 ATP2A1O14983 1001 aa20.24■□□□□ 0.83
CACNA2D4-214ENST00000541616 MSCO60682 206 aa20.24■□□□□ 0.83
CACNA2D4-214ENST00000541616 COBLO75128 1261 aa20.24■□□□□ 0.83
CACNA2D4-214ENST00000541616 MCCP23508 829 aa20.24■□□□□ 0.83
CACNA2D4-214ENST00000541616 CNGA1P29973 690 aa20.24■□□□□ 0.83
CACNA2D4-214ENST00000541616 CYP2C19P33261 490 aa20.24■□□□□ 0.83
CACNA2D4-214ENST00000541616 SLC4A3P48751 1232 aa20.24■□□□□ 0.83
CACNA2D4-214ENST00000541616 DSCC1Q9BVC3 393 aa20.24■□□□□ 0.83
CACNA2D4-214ENST00000541616 NBPF3Q9H094 633 aa20.24■□□□□ 0.83
CACNA2D4-214ENST00000541616 SLC38A10Q9HBR0 1119 aa20.24■□□□□ 0.83
CACNA2D4-214ENST00000541616 TCP11L1Q9NUJ3 509 aa20.24■□□□□ 0.83
CACNA2D4-214ENST00000541616 CTNNA3Q9UI47 895 aa20.24■□□□□ 0.83
CACNA2D4-214ENST00000541616 BRCA2P51587 3418 aa20.24■□□□□ 0.83
CACNA2D4-214ENST00000541616 NT5C2P49902 561 aa20.23■□□□□ 0.83
CACNA2D4-214ENST00000541616 OAZ1P54368 228 aa20.23■□□□□ 0.83
CACNA2D4-214ENST00000541616 RCSD1Q6JBY9 416 aa20.23■□□□□ 0.83
CACNA2D4-214ENST00000541616 RUFY2Q8WXA3 655 aa20.23■□□□□ 0.83
CACNA2D4-214ENST00000541616 ESR2Q92731 530 aa20.23■□□□□ 0.83
CACNA2D4-214ENST00000541616 CHMP4CQ96CF2 233 aa20.23■□□□□ 0.83
CACNA2D4-214ENST00000541616 NR2E3Q9Y5X4 410 aa20.23■□□□□ 0.83
CACNA2D4-214ENST00000541616 TOP1P11387 765 aaKnown RBP20.22■□□□□ 0.83
CACNA2D4-214ENST00000541616 GSPT1P15170 499 aaKnown RBP20.22■□□□□ 0.83
CACNA2D4-214ENST00000541616 IMMTQ16891 758 aaKnown RBP20.22■□□□□ 0.83
CACNA2D4-214ENST00000541616 DCAF4Q8WV16 495 aa20.22■□□□□ 0.83
CACNA2D4-214ENST00000541616 DDX11Q96FC9 970 aa20.22■□□□□ 0.83
CACNA2D4-214ENST00000541616 MAML3Q96JK9 1138 aa20.22■□□□□ 0.83
CACNA2D4-214ENST00000541616 RAVER2Q9HCJ3 691 aaKnown RBP20.22■□□□□ 0.83
CACNA2D4-214ENST00000541616 FBXO40Q9UH90 709 aa20.22■□□□□ 0.83
CACNA2D4-214ENST00000541616 MTMR7Q9Y216 660 aa20.22■□□□□ 0.83
CACNA2D4-214ENST00000541616 DIS3Q9Y2L1 958 aaKnown RBP20.22■□□□□ 0.83
CACNA2D4-214ENST00000541616 CEP290O15078 2479 aa20.22■□□□□ 0.83
CACNA2D4-214ENST00000541616 PLA2G6O60733 806 aa20.21■□□□□ 0.83
CACNA2D4-214ENST00000541616 PGK2P07205 417 aa20.21■□□□□ 0.83
CACNA2D4-214ENST00000541616 NOVP48745 357 aa20.21■□□□□ 0.83
CACNA2D4-214ENST00000541616 CCDC96Q2M329 555 aa20.21■□□□□ 0.83
CACNA2D4-214ENST00000541616 LHX8Q68G74 356 aa20.21■□□□□ 0.83
CACNA2D4-214ENST00000541616 KCTD1Q719H9 257 aa20.21■□□□□ 0.83
CACNA2D4-214ENST00000541616 TBC1D10CQ8IV04 446 aa20.21■□□□□ 0.83
CACNA2D4-214ENST00000541616 DIS3LQ8TF46 1054 aaKnown RBP20.21■□□□□ 0.83
CACNA2D4-214ENST00000541616 TTC14Q96N46 770 aa20.21■□□□□ 0.83
CACNA2D4-214ENST00000541616 C11orf49Q9H6J7 331 aa20.21■□□□□ 0.83
CACNA2D4-214ENST00000541616 DDX20Q9UHI6 824 aaKnown RBP20.21■□□□□ 0.83
CACNA2D4-214ENST00000541616 RAD50Q92878 1312 aa20.21■□□□□ 0.83
CACNA2D4-214ENST00000541616 EVI5O60447 810 aa20.2■□□□□ 0.82
CACNA2D4-214ENST00000541616 CYBAP13498 195 aa20.2■□□□□ 0.82
CACNA2D4-214ENST00000541616 CCDC178Q5BJE1 867 aa20.2■□□□□ 0.82
CACNA2D4-214ENST00000541616 CHST13Q8NET6 341 aa20.2■□□□□ 0.82
CACNA2D4-214ENST00000541616 TMEM47Q9BQJ4 181 aa20.2■□□□□ 0.82
CACNA2D4-214ENST00000541616 H0YGN5 161 aa20.19■□□□□ 0.82
CACNA2D4-214ENST00000541616 IGHA2P01877 340 aa20.19■□□□□ 0.82
CACNA2D4-214ENST00000541616 IQCA1Q86XH1 822 aa20.19■□□□□ 0.82
CACNA2D4-214ENST00000541616 RIPK3Q9Y572 518 aa20.19■□□□□ 0.82
CACNA2D4-214ENST00000541616 MKI67P46013 3256 aaKnown RBP20.19■□□□□ 0.82
CACNA2D4-214ENST00000541616 ZNF792Q3KQV3 632 aa20.18■□□□□ 0.82
CACNA2D4-214ENST00000541616 ANKRD35Q8N283 1001 aa20.18■□□□□ 0.82
CACNA2D4-214ENST00000541616 TRPV1Q8NER1 839 aa20.18■□□□□ 0.82
CACNA2D4-214ENST00000541616 TINF2Q9BSI4 451 aa20.18■□□□□ 0.82
CACNA2D4-214ENST00000541616 NRBP1Q9UHY1 535 aa20.18■□□□□ 0.82
CACNA2D4-214ENST00000541616 NEDD4P46934 1319 aa20.18■□□□□ 0.82
CACNA2D4-214ENST00000541616 LAMA4Q16363 1823 aa20.18■□□□□ 0.82
CACNA2D4-214ENST00000541616 PLXNA1Q9UIW2 1896 aa20.18■□□□□ 0.82
CACNA2D4-214ENST00000541616 SEPT4O43236 478 aa20.17■□□□□ 0.82
CACNA2D4-214ENST00000541616 KDM4AO75164 1064 aa20.17■□□□□ 0.82
CACNA2D4-214ENST00000541616 CHMLP26374 656 aa20.17■□□□□ 0.82
CACNA2D4-214ENST00000541616 TKFCQ3LXA3 575 aa20.17■□□□□ 0.82
CACNA2D4-214ENST00000541616 KRT23Q9C075 422 aa20.17■□□□□ 0.82
CACNA2D4-214ENST00000541616 CNNM2Q9H8M5 875 aa20.17■□□□□ 0.82
CACNA2D4-214ENST00000541616 HOMER2Q9NSB8 354 aa20.17■□□□□ 0.82
CACNA2D4-214ENST00000541616 PRR12Q9ULL5 1215 aa20.17■□□□□ 0.82
CACNA2D4-214ENST00000541616 MNX1P50219 401 aaPredicted RBP20.16■□□□□ 0.82
CACNA2D4-214ENST00000541616 PRAMEF19Q5SWL8 479 aa20.16■□□□□ 0.82
CACNA2D4-214ENST00000541616 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.16■□□□□ 0.82
CACNA2D4-214ENST00000541616 DGKHQ86XP1 1220 aa20.16■□□□□ 0.82
CACNA2D4-214ENST00000541616 MSL3Q8N5Y2 521 aaKnown RBP20.16■□□□□ 0.82
CACNA2D4-214ENST00000541616 ARRDC4Q8NCT1 418 aa20.16■□□□□ 0.82
CACNA2D4-214ENST00000541616 ACAD9Q9H845 621 aa20.16■□□□□ 0.82
CACNA2D4-214ENST00000541616 CNPY2Q9Y2B0 182 aa20.16■□□□□ 0.82
CACNA2D4-214ENST00000541616 CCDC174Q6PII3 467 aa20.15■□□□□ 0.82
CACNA2D4-214ENST00000541616 AGBL1Q96MI9 1066 aa20.15■□□□□ 0.82
CACNA2D4-214ENST00000541616 ZKSCAN3Q9BRR0 538 aa20.15■□□□□ 0.82
CACNA2D4-214ENST00000541616 GPCPD1Q9NPB8 672 aa20.15■□□□□ 0.82
CACNA2D4-214ENST00000541616 RNF146Q9NTX7 359 aa20.15■□□□□ 0.82
CACNA2D4-214ENST00000541616 FRMPD3Q5JV73 1810 aa20.14■□□□□ 0.81
CACNA2D4-214ENST00000541616 FRMPD2Q68DX3 1309 aaPredicted RBP20.14■□□□□ 0.81
CACNA2D4-214ENST00000541616 DNAJC25-GNG10A0A024R161 153 aa20.14■□□□□ 0.81
CACNA2D4-214ENST00000541616 B4E1Z4 1266 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms