RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 PLIN4Q96Q06 1357 aa16.68■□□□□ 0.26
SUDS3-203ENST00000541591 STRNO43815 780 aa16.68■□□□□ 0.26
SUDS3-203ENST00000541591 IGHA2P01877 340 aa16.68■□□□□ 0.26
SUDS3-203ENST00000541591 IRX6P78412 446 aaPredicted RBP16.68■□□□□ 0.26
SUDS3-203ENST00000541591 PDE4BQ07343 736 aa16.68■□□□□ 0.26
SUDS3-203ENST00000541591 OLFML2BQ68BL8 750 aa16.68■□□□□ 0.26
SUDS3-203ENST00000541591 SLFN13Q68D06 897 aa16.68■□□□□ 0.26
SUDS3-203ENST00000541591 ZNF589Q86UQ0 364 aaPredicted RBP16.68■□□□□ 0.26
SUDS3-203ENST00000541591 RILPL2Q969X0 211 aa16.68■□□□□ 0.26
SUDS3-203ENST00000541591 EVI5LQ96CN4 794 aa16.68■□□□□ 0.26
SUDS3-203ENST00000541591 HOMER2Q9NSB8 354 aa16.68■□□□□ 0.26
SUDS3-203ENST00000541591 SLC25A27O95847 323 aa16.67■□□□□ 0.26
SUDS3-203ENST00000541591 TTLL1O95922 423 aa16.67■□□□□ 0.26
SUDS3-203ENST00000541591 MAGEA10P43363 369 aaPredicted RBP16.67■□□□□ 0.26
SUDS3-203ENST00000541591 HAND2P61296 217 aa16.67■□□□□ 0.26
SUDS3-203ENST00000541591 KCTD2Q14681 263 aa16.67■□□□□ 0.26
SUDS3-203ENST00000541591 RRP12Q5JTH9 1297 aaKnown RBP16.67■□□□□ 0.26
SUDS3-203ENST00000541591 NEDD1Q8NHV4 660 aa16.67■□□□□ 0.26
SUDS3-203ENST00000541591 FERMT2Q96AC1 680 aa16.67■□□□□ 0.26
SUDS3-203ENST00000541591 LRCH3Q96II8 777 aa16.67■□□□□ 0.26
SUDS3-203ENST00000541591 TOMM22Q9NS69 142 aa16.67■□□□□ 0.26
SUDS3-203ENST00000541591 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.67■□□□□ 0.26
SUDS3-203ENST00000541591 TMEM232C9JQI7 657 aa16.66■□□□□ 0.26
SUDS3-203ENST00000541591 RANBP6O60518 1105 aaKnown RBP16.66■□□□□ 0.26
SUDS3-203ENST00000541591 SLC3A2P08195 630 aaKnown RBP16.66■□□□□ 0.26
SUDS3-203ENST00000541591 MDM2Q00987 491 aaPredicted RBP16.66■□□□□ 0.26
SUDS3-203ENST00000541591 KCTD1Q719H9 257 aa16.66■□□□□ 0.26
SUDS3-203ENST00000541591 STX8Q9UNK0 236 aa16.66■□□□□ 0.26
SUDS3-203ENST00000541591 CTDP1Q9Y5B0 961 aaPredicted RBP16.66■□□□□ 0.26
SUDS3-203ENST00000541591 TSPY2A6NKD2 308 aa16.65■□□□□ 0.26
SUDS3-203ENST00000541591 BMP3P12645 472 aa16.65■□□□□ 0.26
SUDS3-203ENST00000541591 CAPN2P17655 700 aa16.65■□□□□ 0.26
SUDS3-203ENST00000541591 MCCP23508 829 aa16.65■□□□□ 0.26
SUDS3-203ENST00000541591 IKQ13123 557 aaPredicted RBP16.65■□□□□ 0.26
SUDS3-203ENST00000541591 ZNF792Q3KQV3 632 aa16.65■□□□□ 0.26
SUDS3-203ENST00000541591 ABRAQ8N0Z2 381 aa16.65■□□□□ 0.26
SUDS3-203ENST00000541591 TEX13BQ9BXU2 312 aa16.65■□□□□ 0.26
SUDS3-203ENST00000541591 ZNF287Q9HBT7 754 aa16.65■□□□□ 0.26
SUDS3-203ENST00000541591 IL17RBQ9NRM6 502 aa16.65■□□□□ 0.26
SUDS3-203ENST00000541591 SLC5A4Q9NY91 659 aa16.65■□□□□ 0.26
SUDS3-203ENST00000541591 DDX49Q9Y6V7 483 aaKnown RBP16.65■□□□□ 0.26
SUDS3-203ENST00000541591 SEPT4O43236 478 aa16.64■□□□□ 0.25
SUDS3-203ENST00000541591 ZBED4O75132 1171 aa16.64■□□□□ 0.25
SUDS3-203ENST00000541591 RTP1P59025 263 aa16.64■□□□□ 0.25
SUDS3-203ENST00000541591 CCDC174Q6PII3 467 aa16.64■□□□□ 0.25
SUDS3-203ENST00000541591 SMC5Q8IY18 1101 aa16.64■□□□□ 0.25
SUDS3-203ENST00000541591 PRPF38AQ8NAV1 312 aaKnown RBP16.64■□□□□ 0.25
SUDS3-203ENST00000541591 GMCL1P1Q8NEA9 526 aa16.64■□□□□ 0.25
SUDS3-203ENST00000541591 MKL1Q969V6 931 aa16.64■□□□□ 0.25
SUDS3-203ENST00000541591 GDF15Q99988 308 aa16.64■□□□□ 0.25
SUDS3-203ENST00000541591 TINF2Q9BSI4 451 aa16.64■□□□□ 0.25
SUDS3-203ENST00000541591 HELLSQ9NRZ9 838 aa16.64■□□□□ 0.25
SUDS3-203ENST00000541591 ATP11BQ9Y2G3 1177 aa16.64■□□□□ 0.25
SUDS3-203ENST00000541591 LAMA3Q16787 3333 aa16.63■□□□□ 0.25
SUDS3-203ENST00000541591 KBTBD13C9JR72 458 aa16.63■□□□□ 0.25
SUDS3-203ENST00000541591 DNM1LO00429 736 aa16.63■□□□□ 0.25
SUDS3-203ENST00000541591 MSCO60682 206 aa16.63■□□□□ 0.25
SUDS3-203ENST00000541591 PGK1P00558 417 aa16.63■□□□□ 0.25
SUDS3-203ENST00000541591 ADCYAP1R1P41586 468 aa16.63■□□□□ 0.25
SUDS3-203ENST00000541591 IRX5P78411 483 aaPredicted RBP16.63■□□□□ 0.25
SUDS3-203ENST00000541591 MCMDC2Q4G0Z9 681 aa16.63■□□□□ 0.25
SUDS3-203ENST00000541591 CHD1LQ86WJ1 897 aa16.63■□□□□ 0.25
SUDS3-203ENST00000541591 PLEKHM2Q8IWE5 1019 aa16.63■□□□□ 0.25
SUDS3-203ENST00000541591 DDX11Q96FC9 970 aa16.63■□□□□ 0.25
SUDS3-203ENST00000541591 RWDD1Q9H446 243 aaPredicted RBP16.63■□□□□ 0.25
SUDS3-203ENST00000541591 SLC38A10Q9HBR0 1119 aa16.63■□□□□ 0.25
SUDS3-203ENST00000541591 FEM1BQ9UK73 627 aa16.63■□□□□ 0.25
SUDS3-203ENST00000541591 SUPT16HQ9Y5B9 1047 aaKnown RBP16.63■□□□□ 0.25
SUDS3-203ENST00000541591 GBF1Q92538 1859 aa16.63■□□□□ 0.25
SUDS3-203ENST00000541591 FGAP02671 866 aa16.62■□□□□ 0.25
SUDS3-203ENST00000541591 HSPD1P10809 573 aaKnown RBP16.62■□□□□ 0.25
SUDS3-203ENST00000541591 SLC1A4P43007 532 aa16.62■□□□□ 0.25
SUDS3-203ENST00000541591 LRRC41Q15345 812 aa16.62■□□□□ 0.25
SUDS3-203ENST00000541591 CCDC96Q2M329 555 aa16.62■□□□□ 0.25
SUDS3-203ENST00000541591 AGBL1Q96MI9 1066 aa16.62■□□□□ 0.25
SUDS3-203ENST00000541591 UBE2OQ9C0C9 1292 aaKnown RBP16.62■□□□□ 0.25
SUDS3-203ENST00000541591 PRDM5Q9NQX1 630 aaPredicted RBP16.62■□□□□ 0.25
SUDS3-203ENST00000541591 ZHX1Q9UKY1 873 aaPredicted RBP16.62■□□□□ 0.25
SUDS3-203ENST00000541591 FRMPD2Q68DX3 1309 aaPredicted RBP16.62■□□□□ 0.25
SUDS3-203ENST00000541591 CCDC171Q6TFL3 1326 aa16.62■□□□□ 0.25
SUDS3-203ENST00000541591 MYH7BA7E2Y1 1941 aa16.61■□□□□ 0.25
SUDS3-203ENST00000541591 ZNF865P0CJ78 1059 aaPredicted RBP16.61■□□□□ 0.25
SUDS3-203ENST00000541591 STAT2P52630 851 aa16.61■□□□□ 0.25
SUDS3-203ENST00000541591 TRIM60Q495X7 471 aa16.61■□□□□ 0.25
SUDS3-203ENST00000541591 TTBK2Q6IQ55 1244 aa16.61■□□□□ 0.25
SUDS3-203ENST00000541591 TBC1D10CQ8IV04 446 aa16.61■□□□□ 0.25
SUDS3-203ENST00000541591 FGD4Q96M96 766 aa16.61■□□□□ 0.25
SUDS3-203ENST00000541591 XPNPEP3Q9NQH7 507 aa16.61■□□□□ 0.25
SUDS3-203ENST00000541591 ADCY6O43306 1168 aa16.6■□□□□ 0.25
SUDS3-203ENST00000541591 SNAI1O95863 264 aaPredicted RBP16.6■□□□□ 0.25
SUDS3-203ENST00000541591 ALAS1P13196 640 aa16.6■□□□□ 0.25
SUDS3-203ENST00000541591 PTGS1P23219 599 aa16.6■□□□□ 0.25
SUDS3-203ENST00000541591 SLC16A2P36021 539 aa16.6■□□□□ 0.25
SUDS3-203ENST00000541591 CNTN2Q02246 1040 aa16.6■□□□□ 0.25
SUDS3-203ENST00000541591 NUCB1Q02818 461 aa16.6■□□□□ 0.25
SUDS3-203ENST00000541591 ANKRD35Q8N283 1001 aa16.6■□□□□ 0.25
SUDS3-203ENST00000541591 ARRDC4Q8NCT1 418 aa16.6■□□□□ 0.25
SUDS3-203ENST00000541591 ZKSCAN3Q9BRR0 538 aa16.6■□□□□ 0.25
SUDS3-203ENST00000541591 GPCPD1Q9NPB8 672 aa16.6■□□□□ 0.25
SUDS3-203ENST00000541591 RNF146Q9NTX7 359 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms