RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 PSMB7Q99436 277 aa17.9■□□□□ 0.46
CACFD1-206ENST00000540581 RBM28Q9NW13 759 aaKnown RBP17.9■□□□□ 0.46
CACFD1-206ENST00000540581 LUC7L2Q9Y383 392 aaKnown RBP17.9■□□□□ 0.46
CACFD1-206ENST00000540581 GOLGB1Q14789 3259 aaKnown RBP17.9■□□□□ 0.46
CACFD1-206ENST00000540581 GOLGA8HP0CJ92 632 aa17.9■□□□□ 0.46
CACFD1-206ENST00000540581 TSR1Q2NL82 804 aaKnown RBP17.9■□□□□ 0.46
CACFD1-206ENST00000540581 ANKRD18AQ8IVF6 992 aa17.9■□□□□ 0.46
CACFD1-206ENST00000540581 CAGE1Q8TC20 777 aa17.9■□□□□ 0.46
CACFD1-206ENST00000540581 DYNLL2Q96FJ2 89 aa17.9■□□□□ 0.46
CACFD1-206ENST00000540581 TMEM60Q9H2L4 133 aa17.9■□□□□ 0.46
CACFD1-206ENST00000540581 RABEP2Q9H5N1 569 aa17.9■□□□□ 0.46
CACFD1-206ENST00000540581 CCDC87Q9NVE4 849 aa17.9■□□□□ 0.46
CACFD1-206ENST00000540581 BAZ2AQ9UIF9 1905 aaKnown RBP17.9■□□□□ 0.46
CACFD1-206ENST00000540581 NID2Q14112 1375 aa17.9■□□□□ 0.46
CACFD1-206ENST00000540581 NKRFO15226 690 aaKnown RBP eCLIP17.89■□□□□ 0.463e-6■■■■□ 21
CACFD1-206ENST00000540581 USP17L8P0C7I0 530 aa17.89■□□□□ 0.46
CACFD1-206ENST00000540581 SLC51AQ86UW1 340 aa17.89■□□□□ 0.46
CACFD1-206ENST00000540581 IRF2BP1Q8IU81 584 aa17.89■□□□□ 0.46
CACFD1-206ENST00000540581 HEATR3Q7Z4Q2 680 aa17.89■□□□□ 0.45
CACFD1-206ENST00000540581 SMCR8Q8TEV9 937 aaPredicted RBP17.89■□□□□ 0.45
CACFD1-206ENST00000540581 CELF1Q92879 486 aaKnown RBP17.89■□□□□ 0.45
CACFD1-206ENST00000540581 MCM9Q9NXL9 1143 aa17.89■□□□□ 0.45
CACFD1-206ENST00000540581 EIF3JO75822 258 aaKnown RBP17.89■□□□□ 0.45
CACFD1-206ENST00000540581 BMP15O95972 392 aa17.89■□□□□ 0.45
CACFD1-206ENST00000540581 TRIM21P19474 475 aaKnown RBP17.89■□□□□ 0.45
CACFD1-206ENST00000540581 MATR3P43243 847 aaKnown RBP eCLIP17.89■□□□□ 0.45
CACFD1-206ENST00000540581 MECOMQ03112 1051 aa17.89■□□□□ 0.45
CACFD1-206ENST00000540581 CCDC178Q5BJE1 867 aa17.89■□□□□ 0.45
CACFD1-206ENST00000540581 TYW1BQ6NUM6 668 aa17.89■□□□□ 0.45
CACFD1-206ENST00000540581 LEKR1Q6ZMV7 388 aa17.89■□□□□ 0.45
CACFD1-206ENST00000540581 MSANTD4Q8NCY6 345 aa17.89■□□□□ 0.45
CACFD1-206ENST00000540581 MYH6P13533 1939 aa17.89■□□□□ 0.45
CACFD1-206ENST00000540581 PLEKHG2Q9H7P9 1386 aa17.88■□□□□ 0.45
CACFD1-206ENST00000540581 PIP4K2BP78356 416 aa17.88■□□□□ 0.45
CACFD1-206ENST00000540581 MB21D1Q8N884 522 aa17.88■□□□□ 0.45
CACFD1-206ENST00000540581 OR8K1Q8NGG5 319 aa17.88■□□□□ 0.45
CACFD1-206ENST00000540581 CCDC51Q96ER9 411 aa17.88■□□□□ 0.45
CACFD1-206ENST00000540581 BCL9O00512 1426 aa17.88■□□□□ 0.45
CACFD1-206ENST00000540581 COL1A1P02452 1464 aaPredicted RBP17.88■□□□□ 0.45
CACFD1-206ENST00000540581 CCDC194A0A1B0GVG4 234 aa17.88■□□□□ 0.45
CACFD1-206ENST00000540581 KDM4FA0A1W2PPD8 638 aa17.88■□□□□ 0.45
CACFD1-206ENST00000540581 NTSR2O95665 410 aa17.88■□□□□ 0.45
CACFD1-206ENST00000540581 UBA7P41226 1012 aa17.88■□□□□ 0.45
CACFD1-206ENST00000540581 EXOC4Q96A65 974 aa17.88■□□□□ 0.45
CACFD1-206ENST00000540581 FAM84BQ96KN1 310 aaPredicted RBP17.88■□□□□ 0.45
CACFD1-206ENST00000540581 MAGEC2Q9UBF1 373 aaPredicted RBP17.88■□□□□ 0.45
CACFD1-206ENST00000540581 RAB21Q9UL25 225 aa17.88■□□□□ 0.45
CACFD1-206ENST00000540581 PAPPAQ13219 1627 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 CAMTA2O94983 1202 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 HERVK_113P62684 666 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 SPAG1Q07617 926 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 ITPK1Q13572 414 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 WHAMMP3Q1A5X7 153 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 BLIDQ8IZY5 108 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 CCDC148Q8NFR7 591 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 LACRTQ9GZZ8 138 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 JADE2Q9NQC1 790 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 FEZ2Q9UHY8 353 aaPredicted RBP17.87■□□□□ 0.45
CACFD1-206ENST00000540581 USP17L3A6NCW0 530 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 USP17L4A6NCW7 530 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 RCCD1A6NED2 376 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 SEMA3EO15041 775 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 COL4A1P02462 1669 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 MYH3P11055 1940 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 TFAP4Q01664 338 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 DTHD1Q6ZMT9 781 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 USP17L1Q7RTZ2 530 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 DCP1AQ9NPI6 582 aaPredicted RBP17.87■□□□□ 0.45
CACFD1-206ENST00000540581 ANAPC4Q9UJX5 808 aa17.87■□□□□ 0.45
CACFD1-206ENST00000540581 ITIH6Q6UXX5 1313 aa17.86■□□□□ 0.45
CACFD1-206ENST00000540581 CALM1P0DP23 149 aa17.86■□□□□ 0.45
CACFD1-206ENST00000540581 CALM2P0DP24 149 aa17.86■□□□□ 0.45
CACFD1-206ENST00000540581 CALM3P0DP25 149 aa17.86■□□□□ 0.45
CACFD1-206ENST00000540581 KRT26Q7Z3Y9 468 aa17.86■□□□□ 0.45
CACFD1-206ENST00000540581 SLC44A5Q8NCS7 719 aa17.86■□□□□ 0.45
CACFD1-206ENST00000540581 KAT14Q9H8E8 782 aa17.86■□□□□ 0.45
CACFD1-206ENST00000540581 FAM204AQ9H8W3 233 aa17.86■□□□□ 0.45
CACFD1-206ENST00000540581 VAT1LQ9HCJ6 419 aa17.86■□□□□ 0.45
CACFD1-206ENST00000540581 RSPH14Q9UHP6 348 aa17.86■□□□□ 0.45
CACFD1-206ENST00000540581 NUP98P52948 1817 aa17.86■□□□□ 0.45
CACFD1-206ENST00000540581 POTEB2H3BUK9 544 aa17.86■□□□□ 0.45
CACFD1-206ENST00000540581 ACTN2P35609 894 aa17.86■□□□□ 0.45
CACFD1-206ENST00000540581 PFKFB3Q16875 520 aaPredicted RBP17.86■□□□□ 0.45
CACFD1-206ENST00000540581 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.86■□□□□ 0.45
CACFD1-206ENST00000540581 CSGALNACT2Q8N6G5 542 aa17.86■□□□□ 0.45
CACFD1-206ENST00000540581 JAKMIP2Q96AA8 810 aa17.86■□□□□ 0.45
CACFD1-206ENST00000540581 DISC1Q9NRI5 854 aa17.86■□□□□ 0.45
CACFD1-206ENST00000540581 STX8Q9UNK0 236 aa17.86■□□□□ 0.45
CACFD1-206ENST00000540581 DDAH1O94760 285 aa17.85■□□□□ 0.45
CACFD1-206ENST00000540581 DNA2P51530 1060 aa17.85■□□□□ 0.45
CACFD1-206ENST00000540581 AMPD2Q01433 879 aa17.85■□□□□ 0.45
CACFD1-206ENST00000540581 C2orf54Q08AI8 447 aa17.85■□□□□ 0.45
CACFD1-206ENST00000540581 NAALADL2Q58DX5 795 aa17.85■□□□□ 0.45
CACFD1-206ENST00000540581 WDR59Q6PJI9 974 aa17.85■□□□□ 0.45
CACFD1-206ENST00000540581 LRRC15Q8TF66 581 aa17.85■□□□□ 0.45
CACFD1-206ENST00000540581 UIMC1Q96RL1 719 aa17.85■□□□□ 0.45
CACFD1-206ENST00000540581 DCCP43146 1447 aa17.85■□□□□ 0.45
CACFD1-206ENST00000540581 SHANK3Q9BYB0 1731 aa17.85■□□□□ 0.45
CACFD1-206ENST00000540581 TULP2O00295 520 aa17.85■□□□□ 0.45
CACFD1-206ENST00000540581 PLEKP08567 350 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms