RNA–Protein interactions for RNA: ENST00000540221.1

PXN-209, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-209ENST00000540221 NUP88Q99567 741 aaPredicted RBP10.64□□□□□ -0.71
PXN-209ENST00000540221 MOV10L1Q9BXT6 1211 aaKnown RBP10.64□□□□□ -0.71
PXN-209ENST00000540221 SLC38A10Q9HBR0 1119 aa10.64□□□□□ -0.71
PXN-209ENST00000540221 FBXO28Q9NVF7 368 aa10.64□□□□□ -0.71
PXN-209ENST00000540221 GJD2Q9UKL4 321 aa10.64□□□□□ -0.71
PXN-209ENST00000540221 PTCH2Q9Y6C5 1203 aa10.64□□□□□ -0.71
PXN-209ENST00000540221 IFIT3O14879 490 aaKnown RBP10.63□□□□□ -0.71
PXN-209ENST00000540221 HOXC6P09630 235 aa10.63□□□□□ -0.71
PXN-209ENST00000540221 PDHBP11177 359 aa10.63□□□□□ -0.71
PXN-209ENST00000540221 FCER1AP12319 257 aa10.63□□□□□ -0.71
PXN-209ENST00000540221 PTPREP23469 700 aa10.63□□□□□ -0.71
PXN-209ENST00000540221 CAP1Q01518 475 aa10.63□□□□□ -0.71
PXN-209ENST00000540221 ZNF543Q08ER8 600 aa10.63□□□□□ -0.71
PXN-209ENST00000540221 MAP2K5Q13163 448 aa10.63□□□□□ -0.71
PXN-209ENST00000540221 WTAPQ15007 396 aa10.63□□□□□ -0.71
PXN-209ENST00000540221 TKFCQ3LXA3 575 aa10.63□□□□□ -0.71
PXN-209ENST00000540221 WDR78Q5VTH9 848 aa10.63□□□□□ -0.71
PXN-209ENST00000540221 POTEEQ6S8J3 1075 aa10.63□□□□□ -0.71
PXN-209ENST00000540221 SAMD1Q6SPF0 538 aaPredicted RBP10.63□□□□□ -0.71
PXN-209ENST00000540221 ZKSCAN3Q9BRR0 538 aa10.63□□□□□ -0.71
PXN-209ENST00000540221 PORCNQ9H237 461 aa10.63□□□□□ -0.71
PXN-209ENST00000540221 ZNF214Q9UL59 606 aaPredicted RBP10.63□□□□□ -0.71
PXN-209ENST00000540221 WDR19Q8NEZ3 1342 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 CCDC85CA6NKD9 419 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 ERCC3P19447 782 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 TRAF1Q13077 416 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 GRB14Q14449 540 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 KCTD2Q14681 263 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 SEC23AQ15436 765 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 MORN1Q5T089 497 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 KCTD1Q719H9 257 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.62□□□□□ -0.71
PXN-209ENST00000540221 NCAPG2Q86XI2 1143 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 MB21D2Q8IYB1 491 aaPredicted RBP10.62□□□□□ -0.71
PXN-209ENST00000540221 CHST13Q8NET6 341 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 REPS2Q8NFH8 660 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 USP6NLQ92738 828 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 ZNF333Q96JL9 665 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 MAP3K14Q99558 947 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 APBA2Q99767 749 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 TMEM106CQ9BVX2 250 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 MAF1Q9H063 256 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 GABRQQ9UN88 632 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 LAMA4Q16363 1823 aa10.62□□□□□ -0.71
PXN-209ENST00000540221 HMGCRP04035 888 aa10.61□□□□□ -0.71
PXN-209ENST00000540221 PARP1P09874 1014 aaKnown RBP10.61□□□□□ -0.71
PXN-209ENST00000540221 HSPA4P34932 840 aa10.61□□□□□ -0.71
PXN-209ENST00000540221 LIFRP42702 1097 aa10.61□□□□□ -0.71
PXN-209ENST00000540221 TMEM67Q5HYA8 995 aa10.61□□□□□ -0.71
PXN-209ENST00000540221 SYDE2Q5VT97 1194 aa10.61□□□□□ -0.71
PXN-209ENST00000540221 SNRNP48Q6IEG0 339 aaKnown RBP10.61□□□□□ -0.71
PXN-209ENST00000540221 STOX1Q6ZVD7 989 aa10.61□□□□□ -0.71
PXN-209ENST00000540221 CYB5R4Q7L1T6 521 aa10.61□□□□□ -0.71
PXN-209ENST00000540221 CATIPQ7Z7H3 387 aa10.61□□□□□ -0.71
PXN-209ENST00000540221 DPP9Q86TI2 863 aa10.61□□□□□ -0.71
PXN-209ENST00000540221 NKX2-3Q8TAU0 364 aa10.61□□□□□ -0.71
PXN-209ENST00000540221 KCNB2Q92953 911 aa10.61□□□□□ -0.71
PXN-209ENST00000540221 NEK1Q96PY6 1258 aa10.61□□□□□ -0.71
PXN-209ENST00000540221 BIN2Q9UBW5 565 aaPredicted RBP10.61□□□□□ -0.71
PXN-209ENST00000540221 PRR12Q9ULL5 1215 aa10.61□□□□□ -0.71
PXN-209ENST00000540221 DIS3Q9Y2L1 958 aaKnown RBP10.61□□□□□ -0.71
PXN-209ENST00000540221 PRC1O43663 620 aa10.6□□□□□ -0.71
PXN-209ENST00000540221 ECM2O94769 699 aaPredicted RBP10.6□□□□□ -0.71
PXN-209ENST00000540221 ICAM1P05362 532 aa10.6□□□□□ -0.71
PXN-209ENST00000540221 CALM1P0DP23 149 aa10.6□□□□□ -0.71
PXN-209ENST00000540221 CALM2P0DP24 149 aa10.6□□□□□ -0.71
PXN-209ENST00000540221 CALM3P0DP25 149 aa10.6□□□□□ -0.71
PXN-209ENST00000540221 PSMA5P28066 241 aa10.6□□□□□ -0.71
PXN-209ENST00000540221 ADORA2AP29274 412 aa10.6□□□□□ -0.71
PXN-209ENST00000540221 KIF5BP33176 963 aa10.6□□□□□ -0.71
PXN-209ENST00000540221 DHX32Q7L7V1 743 aaKnown RBP10.6□□□□□ -0.71
PXN-209ENST00000540221 CPXCR1Q8N123 301 aa10.6□□□□□ -0.71
PXN-209ENST00000540221 MSL3Q8N5Y2 521 aaKnown RBP10.6□□□□□ -0.71
PXN-209ENST00000540221 IGDCC4Q8TDY8 1250 aa10.6□□□□□ -0.71
PXN-209ENST00000540221 MMP19Q99542 508 aa10.6□□□□□ -0.71
PXN-209ENST00000540221 RANBP17Q9H2T7 1088 aaKnown RBP10.6□□□□□ -0.71
PXN-209ENST00000540221 MTMR7Q9Y216 660 aa10.6□□□□□ -0.71
PXN-209ENST00000540221 A0A0G2JMZ2 1700 aa10.59□□□□□ -0.71
PXN-209ENST00000540221 CCDC69A6NI79 296 aa10.59□□□□□ -0.71
PXN-209ENST00000540221 PEX10O60683 326 aa10.59□□□□□ -0.71
PXN-209ENST00000540221 DDAH1O94760 285 aa10.59□□□□□ -0.71
PXN-209ENST00000540221 CYP2B6P20813 491 aa10.59□□□□□ -0.71
PXN-209ENST00000540221 GNAQP50148 359 aa10.59□□□□□ -0.71
PXN-209ENST00000540221 MFSD14CQ5VZR4 134 aa10.59□□□□□ -0.71
PXN-209ENST00000540221 OLFML2BQ68BL8 750 aa10.59□□□□□ -0.71
PXN-209ENST00000540221 SYNE3Q6ZMZ3 975 aa10.59□□□□□ -0.71
PXN-209ENST00000540221 SH3TC2Q8TF17 1288 aa10.59□□□□□ -0.71
PXN-209ENST00000540221 DDX11Q96FC9 970 aa10.59□□□□□ -0.71
PXN-209ENST00000540221 LZTS2Q9BRK4 669 aa10.59□□□□□ -0.71
PXN-209ENST00000540221 ACAD9Q9H845 621 aa10.59□□□□□ -0.71
PXN-209ENST00000540221 RAVER2Q9HCJ3 691 aaKnown RBP10.59□□□□□ -0.71
PXN-209ENST00000540221 GPCPD1Q9NPB8 672 aa10.59□□□□□ -0.71
PXN-209ENST00000540221 PFASO15067 1338 aa10.58□□□□□ -0.71
PXN-209ENST00000540221 FRMPD2Q68DX3 1309 aaPredicted RBP10.58□□□□□ -0.71
PXN-209ENST00000540221 KLRF2D3W0D1 207 aa10.58□□□□□ -0.72
PXN-209ENST00000540221 SH2B2O14492 632 aaPredicted RBP10.58□□□□□ -0.72
PXN-209ENST00000540221 INHAP05111 366 aa10.58□□□□□ -0.72
PXN-209ENST00000540221 SMARCA1P28370 1054 aa10.58□□□□□ -0.72
PXN-209ENST00000540221 RCAN1P53805 252 aa10.58□□□□□ -0.72
PXN-209ENST00000540221 ANTXR2P58335 489 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms