RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 KIFC2Q96AC6 838 aa15.75■□□□□ 0.11
CCDC130-202ENST00000540216 ZSCAN10Q96SZ4 725 aaPredicted RBP15.75■□□□□ 0.11
CCDC130-202ENST00000540216 UBAC1Q9BSL1 405 aa15.75■□□□□ 0.11
CCDC130-202ENST00000540216 TEX13BQ9BXU2 312 aa15.75■□□□□ 0.11
CCDC130-202ENST00000540216 ZSWIM5Q9P217 1185 aa15.75■□□□□ 0.11
CCDC130-202ENST00000540216 ISY1Q9ULR0 285 aaKnown RBP15.75■□□□□ 0.11
CCDC130-202ENST00000540216 CTDP1Q9Y5B0 961 aaPredicted RBP15.75■□□□□ 0.11
CCDC130-202ENST00000540216 RBM8AQ9Y5S9 174 aaKnown RBP15.75■□□□□ 0.11
CCDC130-202ENST00000540216 KIAA0100Q14667 2235 aaKnown RBP15.74■□□□□ 0.11
CCDC130-202ENST00000540216 INHAP05111 366 aa15.74■□□□□ 0.11
CCDC130-202ENST00000540216 HOXC6P09630 235 aa15.74■□□□□ 0.11
CCDC130-202ENST00000540216 CCDC96Q2M329 555 aa15.74■□□□□ 0.11
CCDC130-202ENST00000540216 NCAPG2Q86XI2 1143 aa15.74■□□□□ 0.11
CCDC130-202ENST00000540216 LSG1Q9H089 658 aaKnown RBP15.74■□□□□ 0.11
CCDC130-202ENST00000540216 SLC38A10Q9HBR0 1119 aa15.74■□□□□ 0.11
CCDC130-202ENST00000540216 ZKSCAN1P17029 563 aaPredicted RBP15.73■□□□□ 0.11
CCDC130-202ENST00000540216 CYP2B6P20813 491 aa15.73■□□□□ 0.11
CCDC130-202ENST00000540216 IKQ13123 557 aaPredicted RBP15.73■□□□□ 0.11
CCDC130-202ENST00000540216 RALYLQ86SE5 291 aaKnown RBP15.73■□□□□ 0.11
CCDC130-202ENST00000540216 NCOA7Q8NI08 942 aa15.73■□□□□ 0.11
CCDC130-202ENST00000540216 NKX2-3Q8TAU0 364 aa15.73■□□□□ 0.11
CCDC130-202ENST00000540216 TRIB2Q92519 343 aa15.73■□□□□ 0.11
CCDC130-202ENST00000540216 ZKSCAN3Q9BRR0 538 aa15.73■□□□□ 0.11
CCDC130-202ENST00000540216 KAT14Q9H8E8 782 aa15.73■□□□□ 0.11
CCDC130-202ENST00000540216 ANO2Q9NQ90 1003 aa15.73■□□□□ 0.11
CCDC130-202ENST00000540216 SLC5A4Q9NY91 659 aa15.73■□□□□ 0.11
CCDC130-202ENST00000540216 TNKSO95271 1327 aa15.72■□□□□ 0.11
CCDC130-202ENST00000540216 SNHG28P0DPA3 235 aa15.72■□□□□ 0.11
CCDC130-202ENST00000540216 PDHBP11177 359 aa15.72■□□□□ 0.11
CCDC130-202ENST00000540216 FCER1AP12319 257 aa15.72■□□□□ 0.11
CCDC130-202ENST00000540216 CCL5P13501 91 aa15.72■□□□□ 0.11
CCDC130-202ENST00000540216 CAPN2P17655 700 aa15.72■□□□□ 0.11
CCDC130-202ENST00000540216 ADORA2AP29274 412 aa15.72■□□□□ 0.11
CCDC130-202ENST00000540216 GPATCH4Q5T3I0 446 aaKnown RBP15.72■□□□□ 0.11
CCDC130-202ENST00000540216 SNRNP48Q6IEG0 339 aaKnown RBP15.72■□□□□ 0.11
CCDC130-202ENST00000540216 BTNL9Q6UXG8 535 aa15.72■□□□□ 0.11
CCDC130-202ENST00000540216 KCTD1Q719H9 257 aa15.72■□□□□ 0.11
CCDC130-202ENST00000540216 ENAHQ8N8S7 591 aaPredicted RBP15.72■□□□□ 0.11
CCDC130-202ENST00000540216 PNMA1Q8ND90 353 aa15.72■□□□□ 0.11
CCDC130-202ENST00000540216 RNF208Q9H0X6 261 aa15.72■□□□□ 0.11
CCDC130-202ENST00000540216 POTEFA5A3E0 1075 aa15.71■□□□□ 0.11
CCDC130-202ENST00000540216 E7EWF7 191 aa15.71■□□□□ 0.11
CCDC130-202ENST00000540216 MYCP01106 439 aaPredicted RBP15.71■□□□□ 0.11
CCDC130-202ENST00000540216 GJB1P08034 283 aa15.71■□□□□ 0.11
CCDC130-202ENST00000540216 ZNF543Q08ER8 600 aa15.71■□□□□ 0.11
CCDC130-202ENST00000540216 SART3Q15020 963 aaKnown RBP15.71■□□□□ 0.11
CCDC130-202ENST00000540216 MTFR1Q15390 333 aa15.71■□□□□ 0.11
CCDC130-202ENST00000540216 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.71■□□□□ 0.11
CCDC130-202ENST00000540216 FBXO40Q9UH90 709 aa15.71■□□□□ 0.11
CCDC130-202ENST00000540216 MTMR7Q9Y216 660 aa15.71■□□□□ 0.11
CCDC130-202ENST00000540216 MLLT1Q03111 559 aaPredicted RBP15.7■□□□□ 0.1
CCDC130-202ENST00000540216 KCTD2Q14681 263 aa15.7■□□□□ 0.1
CCDC130-202ENST00000540216 NECTIN1Q15223 517 aa15.7■□□□□ 0.1
CCDC130-202ENST00000540216 SEC23AQ15436 765 aa15.7■□□□□ 0.1
CCDC130-202ENST00000540216 IFIT1BQ5T764 474 aaKnown RBP15.7■□□□□ 0.1
CCDC130-202ENST00000540216 MAP3K21Q5TCX8 1036 aa15.7■□□□□ 0.1
CCDC130-202ENST00000540216 RNF20Q5VTR2 975 aa15.7■□□□□ 0.1
CCDC130-202ENST00000540216 OLFML2BQ68BL8 750 aa15.7■□□□□ 0.1
CCDC130-202ENST00000540216 CYB5R4Q7L1T6 521 aa15.7■□□□□ 0.1
CCDC130-202ENST00000540216 RASGRP2Q7LDG7 609 aa15.7■□□□□ 0.1
CCDC130-202ENST00000540216 DPP9Q86TI2 863 aa15.7■□□□□ 0.1
CCDC130-202ENST00000540216 CPXCR1Q8N123 301 aa15.7■□□□□ 0.1
CCDC130-202ENST00000540216 CHST13Q8NET6 341 aa15.7■□□□□ 0.1
CCDC130-202ENST00000540216 MMP19Q99542 508 aa15.7■□□□□ 0.1
CCDC130-202ENST00000540216 UNC93B1Q9H1C4 597 aa15.7■□□□□ 0.1
CCDC130-202ENST00000540216 RAVER2Q9HCJ3 691 aaKnown RBP15.7■□□□□ 0.1
CCDC130-202ENST00000540216 PNMA2Q9UL42 364 aa15.7■□□□□ 0.1
CCDC130-202ENST00000540216 PRR12Q9ULL5 1215 aa15.7■□□□□ 0.1
CCDC130-202ENST00000540216 RPTORQ8N122 1335 aa15.69■□□□□ 0.1
CCDC130-202ENST00000540216 ERICH2A1L162 156 aa15.69■□□□□ 0.1
CCDC130-202ENST00000540216 SLC27A2O14975 620 aa15.69■□□□□ 0.1
CCDC130-202ENST00000540216 GJA8P48165 433 aa15.69■□□□□ 0.1
CCDC130-202ENST00000540216 TKFCQ3LXA3 575 aa15.69■□□□□ 0.1
CCDC130-202ENST00000540216 ASPRV1Q53RT3 343 aa15.69■□□□□ 0.1
CCDC130-202ENST00000540216 SYDE2Q5VT97 1194 aa15.69■□□□□ 0.1
CCDC130-202ENST00000540216 MFSD14CQ5VZR4 134 aa15.69■□□□□ 0.1
CCDC130-202ENST00000540216 STOX1Q6ZVD7 989 aa15.69■□□□□ 0.1
CCDC130-202ENST00000540216 MTA3Q9BTC8 594 aa15.69■□□□□ 0.1
CCDC130-202ENST00000540216 PAK6Q9NQU5 681 aaPredicted RBP15.69■□□□□ 0.1
CCDC130-202ENST00000540216 DIS3Q9Y2L1 958 aaKnown RBP15.69■□□□□ 0.1
CCDC130-202ENST00000540216 TAF6LQ9Y6J9 622 aa15.69■□□□□ 0.1
CCDC130-202ENST00000540216 FRMPD2Q68DX3 1309 aaPredicted RBP15.68■□□□□ 0.1
CCDC130-202ENST00000540216 COBLO75128 1261 aa15.68■□□□□ 0.1
CCDC130-202ENST00000540216 PRKAR2AP13861 404 aaKnown RBP15.68■□□□□ 0.1
CCDC130-202ENST00000540216 CCL14Q16627 93 aa15.68■□□□□ 0.1
CCDC130-202ENST00000540216 CREB3L3Q68CJ9 461 aa15.68■□□□□ 0.1
CCDC130-202ENST00000540216 TTBK2Q6IQ55 1244 aa15.68■□□□□ 0.1
CCDC130-202ENST00000540216 MB21D2Q8IYB1 491 aaPredicted RBP15.68■□□□□ 0.1
CCDC130-202ENST00000540216 NPLOC4Q8TAT6 608 aa15.68■□□□□ 0.1
CCDC130-202ENST00000540216 CHMP4CQ96CF2 233 aa15.68■□□□□ 0.1
CCDC130-202ENST00000540216 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.68■□□□□ 0.18e-8■■■■■ 30.6
CCDC130-202ENST00000540216 RANBP17Q9H2T7 1088 aaKnown RBP15.68■□□□□ 0.1
CCDC130-202ENST00000540216 HMX1Q9NP08 348 aaPredicted RBP15.68■□□□□ 0.1
CCDC130-202ENST00000540216 GPCPD1Q9NPB8 672 aa15.68■□□□□ 0.1
CCDC130-202ENST00000540216 RIPK3Q9Y572 518 aa15.68■□□□□ 0.1
CCDC130-202ENST00000540216 ZNF536O15090 1300 aa15.68■□□□□ 0.1
CCDC130-202ENST00000540216 IFIT3O14879 490 aaKnown RBP15.67■□□□□ 0.1
CCDC130-202ENST00000540216 IGHA2P01877 340 aa15.67■□□□□ 0.1
CCDC130-202ENST00000540216 EN2P19622 333 aaPredicted RBP15.67■□□□□ 0.1
CCDC130-202ENST00000540216 SLC16A2P36021 539 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms