RNA–Protein interactions for RNA: ENST00000540103.1

NPIPB4-212, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 631 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-212ENST00000540103 CCDC129Q6ZRS4 1044 aa9.52□□□□□ -0.89
NPIPB4-212ENST00000540103 SMC5Q8IY18 1101 aa9.52□□□□□ -0.89
NPIPB4-212ENST00000540103 PRPF38AQ8NAV1 312 aaKnown RBP9.52□□□□□ -0.89
NPIPB4-212ENST00000540103 GMCL1P1Q8NEA9 526 aa9.52□□□□□ -0.89
NPIPB4-212ENST00000540103 FGD4Q96M96 766 aa9.52□□□□□ -0.89
NPIPB4-212ENST00000540103 SLF1Q9BQI6 1058 aa9.52□□□□□ -0.89
NPIPB4-212ENST00000540103 CWC22Q9HCG8 908 aaKnown RBP9.52□□□□□ -0.89
NPIPB4-212ENST00000540103 IL17RBQ9NRM6 502 aa9.52□□□□□ -0.89
NPIPB4-212ENST00000540103 PLXNA1Q9UIW2 1896 aa9.52□□□□□ -0.89
NPIPB4-212ENST00000540103 ANAPC4Q9UJX5 808 aa9.52□□□□□ -0.89
NPIPB4-212ENST00000540103 DNM1LO00429 736 aa9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 SNAI1O95863 264 aaPredicted RBP9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 TTLL1O95922 423 aa9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 APPP05067 770 aa9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 PGK2P07205 417 aa9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 ZNF865P0CJ78 1059 aaPredicted RBP9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 TAL1P17542 331 aaPredicted RBP9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 SYN1P17600 705 aa9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 TDO2P48775 406 aa9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 TFAP4Q01664 338 aa9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 LRRFIP1Q32MZ4 808 aaKnown RBP9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 FAM47AQ5JRC9 791 aa9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 ANO1Q5XXA6 986 aa9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 TICAM2Q86XR7 235 aa9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 EVI5LQ96CN4 794 aa9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 MMP19Q99542 508 aa9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 TINF2Q9BSI4 451 aa9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 FSD1Q9BTV5 496 aa9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 SENP6Q9GZR1 1112 aaPredicted RBP9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 SLC38A10Q9HBR0 1119 aa9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 NRBP1Q9UHY1 535 aa9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 DNAH12Q6ZR08 3092 aa9.51□□□□□ -0.89
NPIPB4-212ENST00000540103 PLA2G6O60733 806 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 FGAP02671 866 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 CNGA1P29973 690 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 COPB2P35606 906 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 CTDSPL2Q05D32 466 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 SNX17Q15036 470 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 LRRC41Q15345 812 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 GJC2Q5T442 439 aaPredicted RBP9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 SLFN13Q68D06 897 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 MAMDC4Q6UXC1 1216 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 SLC39A5Q6ZMH5 540 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 CHD1LQ86WJ1 897 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 LRRC47Q8N1G4 583 aaKnown RBP9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 LRCH3Q96II8 777 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 FAM227BQ96M60 508 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 TEX13BQ9BXU2 312 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 NACAP1Q9BZK3 213 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 NAPBQ9H115 298 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 ZNF287Q9HBT7 754 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 HELLSQ9NRZ9 838 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 SLC5A4Q9NY91 659 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 ZNF536O15090 1300 aa9.5□□□□□ -0.89
NPIPB4-212ENST00000540103 A0A0D9SFI3 127 aa9.49□□□□□ -0.89
NPIPB4-212ENST00000540103 NUCB1Q02818 461 aa9.49□□□□□ -0.89
NPIPB4-212ENST00000540103 PDE4BQ07343 736 aa9.49□□□□□ -0.89
NPIPB4-212ENST00000540103 LRIT3Q3SXY7 679 aa9.49□□□□□ -0.89
NPIPB4-212ENST00000540103 C1orf53Q5VUE5 145 aa9.49□□□□□ -0.89
NPIPB4-212ENST00000540103 SNRNP48Q6IEG0 339 aaKnown RBP9.49□□□□□ -0.89
NPIPB4-212ENST00000540103 PLEKHM2Q8IWE5 1019 aa9.49□□□□□ -0.89
NPIPB4-212ENST00000540103 MSL3Q8N5Y2 521 aaKnown RBP9.49□□□□□ -0.89
NPIPB4-212ENST00000540103 ARRDC4Q8NCT1 418 aa9.49□□□□□ -0.89
NPIPB4-212ENST00000540103 KLHDC9Q8NEP7 349 aa9.49□□□□□ -0.89
NPIPB4-212ENST00000540103 GMCL1Q96IK5 515 aa9.49□□□□□ -0.89
NPIPB4-212ENST00000540103 LNPKQ9C0E8 428 aa9.49□□□□□ -0.89
NPIPB4-212ENST00000540103 KATNBL1Q9H079 304 aa9.49□□□□□ -0.89
NPIPB4-212ENST00000540103 OSBPL3Q9H4L5 887 aa9.49□□□□□ -0.89
NPIPB4-212ENST00000540103 RAVER2Q9HCJ3 691 aaKnown RBP9.49□□□□□ -0.89
NPIPB4-212ENST00000540103 FEM1BQ9UK73 627 aa9.49□□□□□ -0.89
NPIPB4-212ENST00000540103 MCM3APO60318 1980 aa9.49□□□□□ -0.89
NPIPB4-212ENST00000540103 ORC4O43929 436 aa9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 RAD21O60216 631 aa9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 NMT2O60551 498 aa9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 ZBED4O75132 1171 aa9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 ADAMTS4O75173 837 aa9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 TSPY3P0CV98 308 aa9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 TSPY8P0CW00 308 aa9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 FDX1P10109 184 aa9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 HSPD1P10809 573 aaKnown RBP9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 BMP3P12645 472 aa9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 ATN1P54259 1190 aaPredicted RBP9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 OAZ1P54368 228 aa9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 RTP1P59025 263 aa9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 KCTD2Q14681 263 aa9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 MCMDC2Q4G0Z9 681 aa9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 CCSAPQ6IQ19 270 aaPredicted RBP9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 RCSD1Q6JBY9 416 aa9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 ZNF467Q7Z7K2 595 aaPredicted RBP9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 ZNF589Q86UQ0 364 aaPredicted RBP9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 CPXCR1Q8N123 301 aa9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 STAG1Q8WVM7 1258 aa9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 TCP11L1Q9NUJ3 509 aa9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 PHF24Q9UPV7 400 aa9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 LAMA3Q16787 3333 aa9.48□□□□□ -0.89
NPIPB4-212ENST00000540103 TMEM232C9JQI7 657 aa9.47□□□□□ -0.89
NPIPB4-212ENST00000540103 ADCY6O43306 1168 aa9.47□□□□□ -0.89
NPIPB4-212ENST00000540103 PGK1P00558 417 aa9.47□□□□□ -0.89
NPIPB4-212ENST00000540103 SLC3A2P08195 630 aaKnown RBP9.47□□□□□ -0.89
NPIPB4-212ENST00000540103 MCCP23508 829 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms