RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 CLIC6Q96NY7 704 aa19.58■□□□□ 0.72
LTBR-207ENST00000539925 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.58■□□□□ 0.72
LTBR-207ENST00000539925 BRCA1P38398 1863 aaKnown RBP19.57■□□□□ 0.72
LTBR-207ENST00000539925 EEF2P13639 858 aaKnown RBP19.57■□□□□ 0.72
LTBR-207ENST00000539925 CCDC96Q2M329 555 aa19.57■□□□□ 0.72
LTBR-207ENST00000539925 GMCL1Q96IK5 515 aa19.57■□□□□ 0.72
LTBR-207ENST00000539925 ZBED3Q96IU2 234 aaPredicted RBP19.57■□□□□ 0.72
LTBR-207ENST00000539925 PIGSQ96S52 555 aa19.57■□□□□ 0.72
LTBR-207ENST00000539925 PCDHA6Q9UN73 950 aa19.57■□□□□ 0.72
LTBR-207ENST00000539925 PCDHA8Q9Y5H6 950 aa19.57■□□□□ 0.72
LTBR-207ENST00000539925 BAZ2BQ9UIF8 2168 aaKnown RBP19.57■□□□□ 0.72
LTBR-207ENST00000539925 SIPA1L1O43166 1804 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 SMCO2A6NFE2 343 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 EIF6P56537 245 aaKnown RBP19.56■□□□□ 0.72
LTBR-207ENST00000539925 ZNF280AP59817 542 aaPredicted RBP19.56■□□□□ 0.72
LTBR-207ENST00000539925 ATP2B2Q01814 1243 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 TRAF1Q13077 416 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 TNFAIP1Q13829 316 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 NONOQ15233 471 aaKnown RBP eCLIP19.56■□□□□ 0.72
LTBR-207ENST00000539925 EARS2Q5JPH6 523 aaKnown RBP19.56■□□□□ 0.72
LTBR-207ENST00000539925 KRBA2Q6ZNG9 492 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 HOMER1Q86YM7 354 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 CNNM3Q8NE01 707 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 DPF2Q92785 391 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 MTMR8Q96EF0 704 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 COL4A5P29400 1685 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 FRMPD2Q68DX3 1309 aaPredicted RBP19.56■□□□□ 0.72
LTBR-207ENST00000539925 TCP10L2B9ZVM9 353 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 NFKBIEO00221 500 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 VEGFAP15692 232 aaPredicted RBP19.56■□□□□ 0.72
LTBR-207ENST00000539925 SLC1A4P43007 532 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 PTGDRQ13258 359 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 ZNF174Q15697 407 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 MCTP2Q6DN12 878 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 TYW1BQ6NUM6 668 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 BPIFA3Q9BQP9 254 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 UBA5Q9GZZ9 404 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 CBX8Q9HC52 389 aa19.56■□□□□ 0.72
LTBR-207ENST00000539925 PPP1R1BQ9UD71 204 aaPredicted RBP19.56■□□□□ 0.72
LTBR-207ENST00000539925 ZBTB12Q9Y330 459 aaPredicted RBP19.56■□□□□ 0.72
LTBR-207ENST00000539925 GOLGA6L19H0YKK7 550 aa19.55■□□□□ 0.72
LTBR-207ENST00000539925 ZBTB5O15062 677 aa19.55■□□□□ 0.72
LTBR-207ENST00000539925 LONP1P36776 959 aaKnown RBP19.55■□□□□ 0.72
LTBR-207ENST00000539925 SEPT2Q15019 361 aa19.55■□□□□ 0.72
LTBR-207ENST00000539925 SLFN13Q68D06 897 aa19.55■□□□□ 0.72
LTBR-207ENST00000539925 REXO1Q8N1G1 1221 aaKnown RBP19.55■□□□□ 0.72
LTBR-207ENST00000539925 CSRNP2Q9H175 543 aa19.55■□□□□ 0.72
LTBR-207ENST00000539925 ARHGEF10LQ9HCE6 1279 aa19.55■□□□□ 0.72
LTBR-207ENST00000539925 VAT1LQ9HCJ6 419 aa19.55■□□□□ 0.72
LTBR-207ENST00000539925 GPCPD1Q9NPB8 672 aa19.55■□□□□ 0.72
LTBR-207ENST00000539925 GINM1Q9NU53 330 aa19.55■□□□□ 0.72
LTBR-207ENST00000539925 TUBE1Q9UJT0 475 aa19.55■□□□□ 0.72
LTBR-207ENST00000539925 BCS1LQ9Y276 419 aa19.55■□□□□ 0.72
LTBR-207ENST00000539925 FAM205CA6NFA0 338 aa19.54■□□□□ 0.72
LTBR-207ENST00000539925 TXLNAP40222 546 aa19.54■□□□□ 0.72
LTBR-207ENST00000539925 PRPHP41219 470 aa19.54■□□□□ 0.72
LTBR-207ENST00000539925 ADCY7P51828 1080 aa19.54■□□□□ 0.72
LTBR-207ENST00000539925 ADGRF4Q8IZF3 695 aa19.54■□□□□ 0.72
LTBR-207ENST00000539925 DNAJC25Q9H1X3 360 aa19.54■□□□□ 0.72
LTBR-207ENST00000539925 SH2D4AQ9H788 454 aa19.54■□□□□ 0.72
LTBR-207ENST00000539925 JMJD4Q9H9V9 463 aa19.54■□□□□ 0.72
LTBR-207ENST00000539925 MYOZ2Q9NPC6 264 aa19.54■□□□□ 0.72
LTBR-207ENST00000539925 CCDC39Q9UFE4 941 aa19.54■□□□□ 0.72
LTBR-207ENST00000539925 CLRN2A0PK11 232 aa19.53■□□□□ 0.72
LTBR-207ENST00000539925 MRPL12P52815 198 aaKnown RBP19.53■□□□□ 0.72
LTBR-207ENST00000539925 NLRP12P59046 1061 aa19.53■□□□□ 0.72
LTBR-207ENST00000539925 NAP1L4Q99733 375 aaKnown RBP19.53■□□□□ 0.72
LTBR-207ENST00000539925 BECN2A8MW95 431 aa19.52■□□□□ 0.72
LTBR-207ENST00000539925 GH2P01242 217 aa19.52■□□□□ 0.72
LTBR-207ENST00000539925 MAP3K10Q02779 954 aa19.52■□□□□ 0.72
LTBR-207ENST00000539925 UPF1Q92900 1129 aaKnown RBP eCLIP19.52■□□□□ 0.721e-10■■■■■ 41
LTBR-207ENST00000539925 VEZTQ9HBM0 779 aa19.52■□□□□ 0.72
LTBR-207ENST00000539925 CNTNAP1P78357 1384 aa19.52■□□□□ 0.72
LTBR-207ENST00000539925 MYH4Q9Y623 1939 aa19.52■□□□□ 0.72
LTBR-207ENST00000539925 F5H6K3 240 aa19.52■□□□□ 0.71
LTBR-207ENST00000539925 MCM7P33993 719 aa19.52■□□□□ 0.71
LTBR-207ENST00000539925 PTGER2P43116 358 aa19.52■□□□□ 0.71
LTBR-207ENST00000539925 TPM4P67936 248 aa19.52■□□□□ 0.71
LTBR-207ENST00000539925 KLRC3Q07444 240 aa19.52■□□□□ 0.71
LTBR-207ENST00000539925 NEK8Q86SG6 692 aa19.52■□□□□ 0.71
LTBR-207ENST00000539925 CLEC10AQ8IUN9 316 aa19.52■□□□□ 0.71
LTBR-207ENST00000539925 TRIML1Q8N9V2 468 aa19.52■□□□□ 0.71
LTBR-207ENST00000539925 GOPCQ9HD26 462 aa19.52■□□□□ 0.71
LTBR-207ENST00000539925 RIC8AQ9NPQ8 531 aa19.52■□□□□ 0.71
LTBR-207ENST00000539925 FAM196BA6NMK8 535 aa19.51■□□□□ 0.71
LTBR-207ENST00000539925 FZD9O00144 591 aa19.51■□□□□ 0.71
LTBR-207ENST00000539925 WNT10BO00744 389 aa19.51■□□□□ 0.71
LTBR-207ENST00000539925 POLR2DO15514 142 aaKnown RBP19.51■□□□□ 0.71
LTBR-207ENST00000539925 ADCY5O95622 1261 aa19.51■□□□□ 0.71
LTBR-207ENST00000539925 LONRF3Q496Y0 759 aa19.51■□□□□ 0.71
LTBR-207ENST00000539925 FAM43AQ8N2R8 423 aa19.51■□□□□ 0.71
LTBR-207ENST00000539925 CUL5Q93034 780 aa19.51■□□□□ 0.71
LTBR-207ENST00000539925 SMTNL1A8MU46 457 aa19.5■□□□□ 0.71
LTBR-207ENST00000539925 SMC2O95347 1197 aa19.5■□□□□ 0.71
LTBR-207ENST00000539925 GDF11O95390 407 aa19.5■□□□□ 0.71
LTBR-207ENST00000539925 TPM3P06753 285 aa19.5■□□□□ 0.71
LTBR-207ENST00000539925 SLFN14P0C7P3 912 aa19.5■□□□□ 0.71
LTBR-207ENST00000539925 BTNL9Q6UXG8 535 aa19.5■□□□□ 0.71
LTBR-207ENST00000539925 DTHD1Q6ZMT9 781 aa19.5■□□□□ 0.71
LTBR-207ENST00000539925 RASGRP2Q7LDG7 609 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms