RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 SBK1Q52WX2 424 aa9.73□□□□□ -0.85
CD4-209ENST00000539492 SNRNP48Q6IEG0 339 aaKnown RBP9.73□□□□□ -0.85
CD4-209ENST00000539492 GIMAP6Q6P9H5 292 aa9.73□□□□□ -0.85
CD4-209ENST00000539492 MAFAQ8NHW3 353 aaPredicted RBP9.73□□□□□ -0.85
CD4-209ENST00000539492 NUP133Q8WUM0 1156 aa9.73□□□□□ -0.85
CD4-209ENST00000539492 LENG1Q96BZ8 264 aaPredicted RBP9.73□□□□□ -0.85
CD4-209ENST00000539492 RNPC3Q96LT9 517 aaKnown RBP9.73□□□□□ -0.85
CD4-209ENST00000539492 TOX2Q96NM4 488 aa9.73□□□□□ -0.85
CD4-209ENST00000539492 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.73□□□□□ -0.85
CD4-209ENST00000539492 LRRCC1Q9C099 1032 aa9.73□□□□□ -0.85
CD4-209ENST00000539492 TTYH1Q9H313 450 aaPredicted RBP9.73□□□□□ -0.85
CD4-209ENST00000539492 STARD7Q9NQZ5 370 aa9.73□□□□□ -0.85
CD4-209ENST00000539492 NYAP2Q9P242 653 aa9.73□□□□□ -0.85
CD4-209ENST00000539492 MOXD2PA6NHM9 499 aa9.72□□□□□ -0.85
CD4-209ENST00000539492 NDUFB10O96000 172 aa9.72□□□□□ -0.85
CD4-209ENST00000539492 RAG1P15918 1043 aa9.72□□□□□ -0.85
CD4-209ENST00000539492 RASA1P20936 1047 aa9.72□□□□□ -0.85
CD4-209ENST00000539492 ITGB8P26012 769 aa9.72□□□□□ -0.85
CD4-209ENST00000539492 MAMDC4Q6UXC1 1216 aa9.72□□□□□ -0.85
CD4-209ENST00000539492 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.72□□□□□ -0.85
CD4-209ENST00000539492 ANKRD33Q7Z3H0 272 aa9.72□□□□□ -0.85
CD4-209ENST00000539492 ZNF467Q7Z7K2 595 aaPredicted RBP9.72□□□□□ -0.85
CD4-209ENST00000539492 MIER1Q8N108 512 aa9.72□□□□□ -0.85
CD4-209ENST00000539492 KLHDC9Q8NEP7 349 aa9.72□□□□□ -0.85
CD4-209ENST00000539492 MYLIPQ8WY64 445 aa9.72□□□□□ -0.85
CD4-209ENST00000539492 STRBPQ96SI9 672 aaKnown RBP9.72□□□□□ -0.85
CD4-209ENST00000539492 NUP88Q99567 741 aaPredicted RBP9.72□□□□□ -0.85
CD4-209ENST00000539492 MKNK2Q9HBH9 465 aa9.72□□□□□ -0.85
CD4-209ENST00000539492 TMEM39AQ9NV64 488 aa9.72□□□□□ -0.85
CD4-209ENST00000539492 FAM184BQ9ULE4 1060 aa9.72□□□□□ -0.85
CD4-209ENST00000539492 LRRC37A2A6NM11 1700 aa9.72□□□□□ -0.85
CD4-209ENST00000539492 SYNRGQ9UMZ2 1314 aa9.72□□□□□ -0.85
CD4-209ENST00000539492 BRWD1Q9NSI6 2320 aa9.72□□□□□ -0.85
CD4-209ENST00000539492 MUC3AQ02505 3323 aa9.72□□□□□ -0.85
CD4-209ENST00000539492 LCTP09848 1927 aa9.72□□□□□ -0.85
CD4-209ENST00000539492 DNAJC25-GNG10A0A024R161 153 aa9.71□□□□□ -0.86
CD4-209ENST00000539492 GSG1L2A8MUP6 293 aa9.71□□□□□ -0.86
CD4-209ENST00000539492 DCDC2CA8MYV0 355 aa9.71□□□□□ -0.86
CD4-209ENST00000539492 F5H6K3 240 aa9.71□□□□□ -0.86
CD4-209ENST00000539492 ATP2A1O14983 1001 aa9.71□□□□□ -0.86
CD4-209ENST00000539492 ZBED4O75132 1171 aa9.71□□□□□ -0.86
CD4-209ENST00000539492 DUSP11O75319 330 aaKnown RBP9.71□□□□□ -0.86
CD4-209ENST00000539492 SNAI1O95863 264 aaPredicted RBP9.71□□□□□ -0.86
CD4-209ENST00000539492 FOSL2P15408 326 aa9.71□□□□□ -0.86
CD4-209ENST00000539492 CST5P28325 142 aaPredicted RBP9.71□□□□□ -0.86
CD4-209ENST00000539492 ACLYP53396 1101 aa9.71□□□□□ -0.86
CD4-209ENST00000539492 EPHB4P54760 987 aa9.71□□□□□ -0.86
CD4-209ENST00000539492 FPGSQ05932 587 aa9.71□□□□□ -0.86
CD4-209ENST00000539492 KLRC3Q07444 240 aa9.71□□□□□ -0.86
CD4-209ENST00000539492 PRPF38AQ8NAV1 312 aaKnown RBP9.71□□□□□ -0.86
CD4-209ENST00000539492 DDX11Q96FC9 970 aa9.71□□□□□ -0.86
CD4-209ENST00000539492 ECHDC1Q9NTX5 307 aa9.71□□□□□ -0.86
CD4-209ENST00000539492 ZHX1Q9UKY1 873 aaPredicted RBP9.71□□□□□ -0.86
CD4-209ENST00000539492 RIPK3Q9Y572 518 aa9.71□□□□□ -0.86
CD4-209ENST00000539492 CTDP1Q9Y5B0 961 aaPredicted RBP9.71□□□□□ -0.86
CD4-209ENST00000539492 MROH7Q68CQ1 1323 aa9.71□□□□□ -0.86
CD4-209ENST00000539492 PLIN4Q96Q06 1357 aa9.71□□□□□ -0.86
CD4-209ENST00000539492 IGKV6D-41A0A0C4DH26 115 aa9.7□□□□□ -0.86
CD4-209ENST00000539492 MINDY4BA8MYZ0 360 aa9.7□□□□□ -0.86
CD4-209ENST00000539492 SMARCA5O60264 1052 aaPredicted RBP9.7□□□□□ -0.86
CD4-209ENST00000539492 GNAT2P19087 354 aa9.7□□□□□ -0.86
CD4-209ENST00000539492 FAAP100Q0VG06 881 aa9.7□□□□□ -0.86
CD4-209ENST00000539492 KCNA10Q16322 511 aa9.7□□□□□ -0.86
CD4-209ENST00000539492 CCSAPQ6IQ19 270 aaPredicted RBP9.7□□□□□ -0.86
CD4-209ENST00000539492 CPXCR1Q8N123 301 aa9.7□□□□□ -0.86
CD4-209ENST00000539492 KBTBD3Q8NAB2 608 aa9.7□□□□□ -0.86
CD4-209ENST00000539492 PCSK9Q8NBP7 692 aaKnown RBP9.7□□□□□ -0.86
CD4-209ENST00000539492 CHST13Q8NET6 341 aa9.7□□□□□ -0.86
CD4-209ENST00000539492 APPBP2Q92624 585 aa9.7□□□□□ -0.86
CD4-209ENST00000539492 GPATCH3Q96I76 525 aa9.7□□□□□ -0.86
CD4-209ENST00000539492 ABHD16BQ9H3Z7 469 aa9.7□□□□□ -0.86
CD4-209ENST00000539492 SPC25Q9HBM1 224 aa9.7□□□□□ -0.86
CD4-209ENST00000539492 SLC38A10Q9HBR0 1119 aa9.7□□□□□ -0.86
CD4-209ENST00000539492 ZNF287Q9HBT7 754 aa9.7□□□□□ -0.86
CD4-209ENST00000539492 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.7□□□□□ -0.86
CD4-209ENST00000539492 FBXO40Q9UH90 709 aa9.7□□□□□ -0.86
CD4-209ENST00000539492 FEM1BQ9UK73 627 aa9.7□□□□□ -0.86
CD4-209ENST00000539492 TBX21Q9UL17 535 aa9.7□□□□□ -0.86
CD4-209ENST00000539492 SYNPO2Q9UMS6 1093 aa9.7□□□□□ -0.86
CD4-209ENST00000539492 ELP1O95163 1332 aa9.7□□□□□ -0.86
CD4-209ENST00000539492 TRIP12Q14669 1992 aaPredicted RBP9.7□□□□□ -0.86
CD4-209ENST00000539492 PRRC2BQ5JSZ5 2229 aaKnown RBP9.7□□□□□ -0.86
CD4-209ENST00000539492 A0A0U1RQG5 324 aaPredicted RBP9.69□□□□□ -0.86
CD4-209ENST00000539492 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.69□□□□□ -0.86
CD4-209ENST00000539492 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.69□□□□□ -0.86
CD4-209ENST00000539492 MYADML2A6NDP7 307 aa9.69□□□□□ -0.86
CD4-209ENST00000539492 RNF113AO15541 343 aaKnown RBP9.69□□□□□ -0.86
CD4-209ENST00000539492 GPAA1O43292 621 aa9.69□□□□□ -0.86
CD4-209ENST00000539492 TIMP1P01033 207 aa9.69□□□□□ -0.86
CD4-209ENST00000539492 ZFYP08048 801 aaPredicted RBP9.69□□□□□ -0.86
CD4-209ENST00000539492 C6orf222P0C671 652 aaPredicted RBP9.69□□□□□ -0.86
CD4-209ENST00000539492 DNAJB2P25686 324 aa9.69□□□□□ -0.86
CD4-209ENST00000539492 TDO2P48775 406 aa9.69□□□□□ -0.86
CD4-209ENST00000539492 OAZ1P54368 228 aa9.69□□□□□ -0.86
CD4-209ENST00000539492 PPIGQ13427 754 aaKnown RBP eCLIP9.69□□□□□ -0.86
CD4-209ENST00000539492 ACVR2BQ13705 512 aa9.69□□□□□ -0.86
CD4-209ENST00000539492 CCDC174Q6PII3 467 aa9.69□□□□□ -0.86
CD4-209ENST00000539492 ARMCX2Q7L311 632 aa9.69□□□□□ -0.86
CD4-209ENST00000539492 STK11IPQ8N1F8 1099 aa9.69□□□□□ -0.86
CD4-209ENST00000539492 ANKRD35Q8N283 1001 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms