RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 SNRNP48Q6IEG0 339 aaKnown RBP14.93□□□□□ -0.02
VAMP1-206ENST00000538970 SLC39A5Q6ZMH5 540 aa14.93□□□□□ -0.02
VAMP1-206ENST00000538970 CEP95Q96GE4 821 aa14.93□□□□□ -0.02
VAMP1-206ENST00000538970 SEC62Q99442 399 aaKnown RBP14.93□□□□□ -0.02
VAMP1-206ENST00000538970 ZNF287Q9HBT7 754 aa14.93□□□□□ -0.02
VAMP1-206ENST00000538970 CLIP2Q9UDT6 1046 aa14.93□□□□□ -0.02
VAMP1-206ENST00000538970 SYNPO2Q9UMS6 1093 aa14.93□□□□□ -0.02
VAMP1-206ENST00000538970 ATP11BQ9Y2G3 1177 aa14.93□□□□□ -0.02
VAMP1-206ENST00000538970 MYCNP04198 464 aaPredicted RBP14.92□□□□□ -0.02
VAMP1-206ENST00000538970 ZNF444Q8N0Y2 327 aaPredicted RBP14.92□□□□□ -0.02
VAMP1-206ENST00000538970 PRPF38AQ8NAV1 312 aaKnown RBP14.92□□□□□ -0.02
VAMP1-206ENST00000538970 MKL1Q969V6 931 aa14.92□□□□□ -0.02
VAMP1-206ENST00000538970 LBHD1Q9BQE6 289 aaPredicted RBP14.92□□□□□ -0.02
VAMP1-206ENST00000538970 FSD1Q9BTV5 496 aa14.92□□□□□ -0.02
VAMP1-206ENST00000538970 XPNPEP3Q9NQH7 507 aa14.92□□□□□ -0.02
VAMP1-206ENST00000538970 MTMR4Q9NYA4 1195 aa14.92□□□□□ -0.02
VAMP1-206ENST00000538970 PRKAG2Q9UGJ0 569 aa14.92□□□□□ -0.02
VAMP1-206ENST00000538970 RIPK3Q9Y572 518 aa14.92□□□□□ -0.02
VAMP1-206ENST00000538970 SALL3Q9BXA9 1300 aa14.92□□□□□ -0.02
VAMP1-206ENST00000538970 DNAH12Q6ZR08 3092 aa14.91□□□□□ -0.02
VAMP1-206ENST00000538970 ATP2A1O14983 1001 aa14.91□□□□□ -0.02
VAMP1-206ENST00000538970 ZNF865P0CJ78 1059 aaPredicted RBP14.91□□□□□ -0.02
VAMP1-206ENST00000538970 RARBP10826 455 aa14.91□□□□□ -0.02
VAMP1-206ENST00000538970 TAL1P17542 331 aaPredicted RBP14.91□□□□□ -0.02
VAMP1-206ENST00000538970 MX1P20591 662 aa14.91□□□□□ -0.02
VAMP1-206ENST00000538970 ADCYAP1R1P41586 468 aa14.91□□□□□ -0.02
VAMP1-206ENST00000538970 TRIM60Q495X7 471 aa14.91□□□□□ -0.02
VAMP1-206ENST00000538970 ZMYM1Q5SVZ6 1142 aa14.91□□□□□ -0.02
VAMP1-206ENST00000538970 ZNF697Q5TEC3 545 aa14.91□□□□□ -0.02
VAMP1-206ENST00000538970 C1orf53Q5VUE5 145 aa14.91□□□□□ -0.02
VAMP1-206ENST00000538970 LRRC47Q8N1G4 583 aaKnown RBP14.91□□□□□ -0.02
VAMP1-206ENST00000538970 GMCL1P1Q8NEA9 526 aa14.91□□□□□ -0.02
VAMP1-206ENST00000538970 NACAP1Q9BZK3 213 aa14.91□□□□□ -0.02
VAMP1-206ENST00000538970 PHF24Q9UPV7 400 aa14.91□□□□□ -0.02
VAMP1-206ENST00000538970 PLXNA1Q9UIW2 1896 aa14.91□□□□□ -0.02
VAMP1-206ENST00000538970 TTLL1O95922 423 aa14.9□□□□□ -0.02
VAMP1-206ENST00000538970 AKR1A1P14550 325 aa14.9□□□□□ -0.02
VAMP1-206ENST00000538970 RRP1P56182 461 aaKnown RBP14.9□□□□□ -0.02
VAMP1-206ENST00000538970 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.9□□□□□ -0.02
VAMP1-206ENST00000538970 MSL3Q8N5Y2 521 aaKnown RBP14.9□□□□□ -0.02
VAMP1-206ENST00000538970 NEDD1Q8NHV4 660 aa14.9□□□□□ -0.02
VAMP1-206ENST00000538970 MYLIPQ8WY64 445 aa14.9□□□□□ -0.02
VAMP1-206ENST00000538970 FERMT2Q96AC1 680 aa14.9□□□□□ -0.02
VAMP1-206ENST00000538970 KIFC2Q96AC6 838 aa14.9□□□□□ -0.02
VAMP1-206ENST00000538970 LENG1Q96BZ8 264 aaPredicted RBP14.9□□□□□ -0.02
VAMP1-206ENST00000538970 NAPBQ9H115 298 aa14.9□□□□□ -0.02
VAMP1-206ENST00000538970 SLC38A10Q9HBR0 1119 aa14.9□□□□□ -0.02
VAMP1-206ENST00000538970 PDLIM7Q9NR12 457 aa14.9□□□□□ -0.02
VAMP1-206ENST00000538970 CNPY2Q9Y2B0 182 aa14.9□□□□□ -0.02
VAMP1-206ENST00000538970 SYNGAP1Q96PV0 1343 aa14.9□□□□□ -0.02
VAMP1-206ENST00000538970 DNAJC25-GNG10A0A024R161 153 aa14.89□□□□□ -0.03
VAMP1-206ENST00000538970 FOXP2O15409 715 aa14.89□□□□□ -0.03
VAMP1-206ENST00000538970 ZBED4O75132 1171 aa14.89□□□□□ -0.03
VAMP1-206ENST00000538970 PGK1P00558 417 aa14.89□□□□□ -0.03
VAMP1-206ENST00000538970 TSPY3P0CV98 308 aa14.89□□□□□ -0.03
VAMP1-206ENST00000538970 TSPY8P0CW00 308 aa14.89□□□□□ -0.03
VAMP1-206ENST00000538970 PDE4BQ07343 736 aa14.89□□□□□ -0.03
VAMP1-206ENST00000538970 PPARAQ07869 468 aa14.89□□□□□ -0.03
VAMP1-206ENST00000538970 RNF180Q86T96 592 aa14.89□□□□□ -0.03
VAMP1-206ENST00000538970 CPXCR1Q8N123 301 aa14.89□□□□□ -0.03
VAMP1-206ENST00000538970 RAVER2Q9HCJ3 691 aaKnown RBP14.89□□□□□ -0.03
VAMP1-206ENST00000538970 PRDM5Q9NQX1 630 aaPredicted RBP14.89□□□□□ -0.03
VAMP1-206ENST00000538970 FEM1BQ9UK73 627 aa14.89□□□□□ -0.03
VAMP1-206ENST00000538970 MYH4Q9Y623 1939 aa14.89□□□□□ -0.03
VAMP1-206ENST00000538970 ZNFX1Q9P2E3 1918 aaKnown RBP14.88□□□□□ -0.03
VAMP1-206ENST00000538970 ADAMTS4O75173 837 aa14.88□□□□□ -0.03
VAMP1-206ENST00000538970 SLC3A2P08195 630 aaKnown RBP14.88□□□□□ -0.03
VAMP1-206ENST00000538970 BMP3P12645 472 aa14.88□□□□□ -0.03
VAMP1-206ENST00000538970 OAZ1P54368 228 aa14.88□□□□□ -0.03
VAMP1-206ENST00000538970 SLFN13Q68D06 897 aa14.88□□□□□ -0.03
VAMP1-206ENST00000538970 MAMDC4Q6UXC1 1216 aa14.88□□□□□ -0.03
VAMP1-206ENST00000538970 DDX11Q96FC9 970 aa14.88□□□□□ -0.03
VAMP1-206ENST00000538970 SEMA6BQ9H3T3 888 aa14.88□□□□□ -0.03
VAMP1-206ENST00000538970 CTDP1Q9Y5B0 961 aaPredicted RBP14.88□□□□□ -0.03
VAMP1-206ENST00000538970 A0A1W2PQ45 241 aaPredicted RBP14.87□□□□□ -0.03
VAMP1-206ENST00000538970 A0A1W2PQY0 241 aa14.87□□□□□ -0.03
VAMP1-206ENST00000538970 TRIM43BA6NCK2 446 aa14.87□□□□□ -0.03
VAMP1-206ENST00000538970 SNAI1O95863 264 aaPredicted RBP14.87□□□□□ -0.03
VAMP1-206ENST00000538970 SLC4A3P48751 1232 aa14.87□□□□□ -0.03
VAMP1-206ENST00000538970 TFAP4Q01664 338 aa14.87□□□□□ -0.03
VAMP1-206ENST00000538970 CCDC129Q6ZRS4 1044 aa14.87□□□□□ -0.03
VAMP1-206ENST00000538970 SH3RF1Q7Z6J0 888 aa14.87□□□□□ -0.03
VAMP1-206ENST00000538970 ZNF467Q7Z7K2 595 aaPredicted RBP14.87□□□□□ -0.03
VAMP1-206ENST00000538970 TRIM43Q96BQ3 446 aaPredicted RBP14.87□□□□□ -0.03
VAMP1-206ENST00000538970 FGD4Q96M96 766 aa14.87□□□□□ -0.03
VAMP1-206ENST00000538970 TTYH1Q9H313 450 aaPredicted RBP14.87□□□□□ -0.03
VAMP1-206ENST00000538970 FBXO40Q9UH90 709 aa14.87□□□□□ -0.03
VAMP1-206ENST00000538970 ZHX1Q9UKY1 873 aaPredicted RBP14.87□□□□□ -0.03
VAMP1-206ENST00000538970 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.87□□□□□ -0.03
VAMP1-206ENST00000538970 SYNRGQ9UMZ2 1314 aa14.87□□□□□ -0.03
VAMP1-206ENST00000538970 STAT2P52630 851 aa14.86□□□□□ -0.03
VAMP1-206ENST00000538970 TLE2Q04725 743 aa14.86□□□□□ -0.03
VAMP1-206ENST00000538970 ANKRD35Q8N283 1001 aa14.86□□□□□ -0.03
VAMP1-206ENST00000538970 CHST13Q8NET6 341 aa14.86□□□□□ -0.03
VAMP1-206ENST00000538970 BADQ92934 168 aa14.86□□□□□ -0.03
VAMP1-206ENST00000538970 GMCL1Q96IK5 515 aa14.86□□□□□ -0.03
VAMP1-206ENST00000538970 FAM184BQ9ULE4 1060 aa14.86□□□□□ -0.03
VAMP1-206ENST00000538970 TMEM232C9JQI7 657 aa14.85□□□□□ -0.03
VAMP1-206ENST00000538970 CLTBP09497 229 aa14.85□□□□□ -0.03
VAMP1-206ENST00000538970 FDX1P10109 184 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms