RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 E7EWF7 191 aa16.15■□□□□ 0.18
CD9-208ENST00000538834 CDC45O75419 566 aa16.15■□□□□ 0.18
CD9-208ENST00000538834 SLC25A27O95847 323 aa16.15■□□□□ 0.18
CD9-208ENST00000538834 PDHBP11177 359 aa16.15■□□□□ 0.18
CD9-208ENST00000538834 ERCC3P19447 782 aa16.15■□□□□ 0.18
CD9-208ENST00000538834 OAZ1P54368 228 aa16.15■□□□□ 0.18
CD9-208ENST00000538834 MTFR1Q15390 333 aa16.15■□□□□ 0.18
CD9-208ENST00000538834 FAM160B2Q86V87 743 aa16.15■□□□□ 0.18
CD9-208ENST00000538834 TRIB2Q92519 343 aa16.15■□□□□ 0.18
CD9-208ENST00000538834 ZSCAN10Q96SZ4 725 aaPredicted RBP16.15■□□□□ 0.18
CD9-208ENST00000538834 TMEM232C9JQI7 657 aa16.14■□□□□ 0.17
CD9-208ENST00000538834 CAPN15O75808 1086 aa16.14■□□□□ 0.17
CD9-208ENST00000538834 ELNP15502 786 aa16.14■□□□□ 0.17
CD9-208ENST00000538834 STAT3P40763 770 aa16.14■□□□□ 0.17
CD9-208ENST00000538834 SLC1A4P43007 532 aa16.14■□□□□ 0.17
CD9-208ENST00000538834 STAT2P52630 851 aa16.14■□□□□ 0.17
CD9-208ENST00000538834 TSGA10IPQ3SY00 556 aa16.14■□□□□ 0.17
CD9-208ENST00000538834 MB21D2Q8IYB1 491 aaPredicted RBP16.14■□□□□ 0.17
CD9-208ENST00000538834 CHURC1Q8WUH1 139 aa16.14■□□□□ 0.17
CD9-208ENST00000538834 KCNB2Q92953 911 aa16.14■□□□□ 0.17
CD9-208ENST00000538834 PAK6Q9NQU5 681 aaPredicted RBP16.14■□□□□ 0.17
CD9-208ENST00000538834 TOMM22Q9NS69 142 aa16.14■□□□□ 0.17
CD9-208ENST00000538834 RIPK3Q9Y572 518 aa16.14■□□□□ 0.17
CD9-208ENST00000538834 ALPK3Q96L96 1907 aa16.13■□□□□ 0.17
CD9-208ENST00000538834 ANTXR2P58335 489 aa16.13■□□□□ 0.17
CD9-208ENST00000538834 ZNF543Q08ER8 600 aa16.13■□□□□ 0.17
CD9-208ENST00000538834 COL9A3Q14050 684 aaPredicted RBP16.13■□□□□ 0.17
CD9-208ENST00000538834 IQCA1Q86XH1 822 aa16.13■□□□□ 0.17
CD9-208ENST00000538834 TRMT44Q8IYL2 757 aaKnown RBP16.13■□□□□ 0.17
CD9-208ENST00000538834 NPLOC4Q8TAT6 608 aa16.13■□□□□ 0.17
CD9-208ENST00000538834 APBA2Q99767 749 aa16.13■□□□□ 0.17
CD9-208ENST00000538834 ZKSCAN3Q9BRR0 538 aa16.13■□□□□ 0.17
CD9-208ENST00000538834 MTA3Q9BTC8 594 aa16.13■□□□□ 0.17
CD9-208ENST00000538834 TEX13BQ9BXU2 312 aa16.13■□□□□ 0.17
CD9-208ENST00000538834 PRR12Q9ULL5 1215 aa16.13■□□□□ 0.17
CD9-208ENST00000538834 DNAJC25-GNG10A0A024R161 153 aa16.12■□□□□ 0.17
CD9-208ENST00000538834 SLC27A2O14975 620 aa16.12■□□□□ 0.17
CD9-208ENST00000538834 COBLO75128 1261 aa16.12■□□□□ 0.17
CD9-208ENST00000538834 HMGCRP04035 888 aa16.12■□□□□ 0.17
CD9-208ENST00000538834 INHAP05111 366 aa16.12■□□□□ 0.17
CD9-208ENST00000538834 CYP2B6P20813 491 aa16.12■□□□□ 0.17
CD9-208ENST00000538834 COPB2P35606 906 aa16.12■□□□□ 0.17
CD9-208ENST00000538834 RGS2P41220 211 aa16.12■□□□□ 0.17
CD9-208ENST00000538834 SOX10P56693 466 aa16.12■□□□□ 0.17
CD9-208ENST00000538834 TTBK2Q6IQ55 1244 aa16.12■□□□□ 0.17
CD9-208ENST00000538834 KCTD1Q719H9 257 aa16.12■□□□□ 0.17
CD9-208ENST00000538834 IGDCC4Q8TDY8 1250 aa16.12■□□□□ 0.17
CD9-208ENST00000538834 RANBP17Q9H2T7 1088 aaKnown RBP16.12■□□□□ 0.17
CD9-208ENST00000538834 FLRT1Q9NZU1 646 aa16.12■□□□□ 0.17
CD9-208ENST00000538834 TNKSO95271 1327 aa16.12■□□□□ 0.17
CD9-208ENST00000538834 GJB1P08034 283 aa16.11■□□□□ 0.17
CD9-208ENST00000538834 CCL5P13501 91 aa16.11■□□□□ 0.17
CD9-208ENST00000538834 CAPN2P17655 700 aa16.11■□□□□ 0.17
CD9-208ENST00000538834 ADORA2AP29274 412 aa16.11■□□□□ 0.17
CD9-208ENST00000538834 TRIM32Q13049 653 aa16.11■□□□□ 0.17
CD9-208ENST00000538834 CCL14Q16627 93 aa16.11■□□□□ 0.17
CD9-208ENST00000538834 CREB3L3Q68CJ9 461 aa16.11■□□□□ 0.17
CD9-208ENST00000538834 UBE2Q1Q7Z7E8 422 aa16.11■□□□□ 0.17
CD9-208ENST00000538834 PNMA1Q8ND90 353 aa16.11■□□□□ 0.17
CD9-208ENST00000538834 NCOA7Q8NI08 942 aa16.11■□□□□ 0.17
CD9-208ENST00000538834 KIFC2Q96AC6 838 aa16.11■□□□□ 0.17
CD9-208ENST00000538834 SHISA4Q96DD7 197 aa16.11■□□□□ 0.17
CD9-208ENST00000538834 CRISPLD2Q9H0B8 497 aa16.11■□□□□ 0.17
CD9-208ENST00000538834 DIS3Q9Y2L1 958 aaKnown RBP16.11■□□□□ 0.17
CD9-208ENST00000538834 EPB41L2O43491 1005 aaKnown RBP16.1■□□□□ 0.17
CD9-208ENST00000538834 RAD21O60216 631 aa16.1■□□□□ 0.17
CD9-208ENST00000538834 ZBED4O75132 1171 aa16.1■□□□□ 0.17
CD9-208ENST00000538834 GJA8P48165 433 aa16.1■□□□□ 0.17
CD9-208ENST00000538834 UBXN2AP68543 259 aa16.1■□□□□ 0.17
CD9-208ENST00000538834 ZNF792Q3KQV3 632 aa16.1■□□□□ 0.17
CD9-208ENST00000538834 OLFML2BQ68BL8 750 aa16.1■□□□□ 0.17
CD9-208ENST00000538834 KIAA1211Q6ZU35 1233 aa16.1■□□□□ 0.17
CD9-208ENST00000538834 UNC93B1Q9H1C4 597 aa16.1■□□□□ 0.17
CD9-208ENST00000538834 LRRC37A2A6NM11 1700 aa16.1■□□□□ 0.17
CD9-208ENST00000538834 EN2P19622 333 aaPredicted RBP16.09■□□□□ 0.17
CD9-208ENST00000538834 CACNB2Q08289 660 aaPredicted RBP16.09■□□□□ 0.17
CD9-208ENST00000538834 GPATCH4Q5T3I0 446 aaKnown RBP16.09■□□□□ 0.17
CD9-208ENST00000538834 SNRNP48Q6IEG0 339 aaKnown RBP16.09■□□□□ 0.17
CD9-208ENST00000538834 NCAPG2Q86XI2 1143 aa16.09■□□□□ 0.17
CD9-208ENST00000538834 CHST13Q8NET6 341 aa16.09■□□□□ 0.17
CD9-208ENST00000538834 SENP2Q9HC62 589 aa16.09■□□□□ 0.17
CD9-208ENST00000538834 RAVER2Q9HCJ3 691 aaKnown RBP16.09■□□□□ 0.17
CD9-208ENST00000538834 ANO2Q9NQ90 1003 aa16.09■□□□□ 0.17
CD9-208ENST00000538834 IVNS1ABPQ9Y6Y0 642 aa16.09■□□□□ 0.17
CD9-208ENST00000538834 RPTORQ8N122 1335 aa16.09■□□□□ 0.17
CD9-208ENST00000538834 FCER1AP12319 257 aa16.08■□□□□ 0.16
CD9-208ENST00000538834 TROAPQ12815 778 aa16.08■□□□□ 0.16
CD9-208ENST00000538834 TRDNQ13061 729 aa16.08■□□□□ 0.16
CD9-208ENST00000538834 PLS1Q14651 629 aa16.08■□□□□ 0.16
CD9-208ENST00000538834 TKFCQ3LXA3 575 aa16.08■□□□□ 0.16
CD9-208ENST00000538834 SYDE2Q5VT97 1194 aa16.08■□□□□ 0.16
CD9-208ENST00000538834 CCAR1Q8IX12 1150 aaKnown RBP16.08■□□□□ 0.16
CD9-208ENST00000538834 RASEFQ8IZ41 740 aa16.08■□□□□ 0.16
CD9-208ENST00000538834 MTMR8Q96EF0 704 aa16.08■□□□□ 0.16
CD9-208ENST00000538834 FGD4Q96M96 766 aa16.08■□□□□ 0.16
CD9-208ENST00000538834 TMEM106CQ9BVX2 250 aa16.08■□□□□ 0.16
CD9-208ENST00000538834 DNAH12Q6ZR08 3092 aa16.08■□□□□ 0.16
CD9-208ENST00000538834 PALM3A6NDB9 673 aaPredicted RBP16.07■□□□□ 0.16
CD9-208ENST00000538834 SGPL1O95470 568 aa16.07■□□□□ 0.16
CD9-208ENST00000538834 ICAM1P05362 532 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms