RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 KRBA2Q6ZNG9 492 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 SPICE1Q8N0Z3 855 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 FAM43AQ8N2R8 423 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 TMEM39BQ9GZU3 492 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 SWAP70Q9UH65 585 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 PCDHA5Q9Y5H7 936 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 SPDYE2BA6NHP3 402 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 USP17L10C9JJH3 530 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 M0R2N6 131 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 GH2P01242 217 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 SPDYE6P0CI01 402 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 RRP36Q96EU6 259 aaKnown RBP16.14■□□□□ 0.17
ACTN1-205ENST00000538545 SPZ1Q9BXG8 430 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 NOL7Q9UMY1 257 aaKnown RBP16.14■□□□□ 0.17
ACTN1-205ENST00000538545 CCDC194A0A1B0GVG4 234 aa16.13■□□□□ 0.17
ACTN1-205ENST00000538545 RASSF7Q02833 373 aa16.13■□□□□ 0.17
ACTN1-205ENST00000538545 ADGRF4Q8IZF3 695 aa16.13■□□□□ 0.17
ACTN1-205ENST00000538545 SLC16A10Q8TF71 515 aa16.13■□□□□ 0.17
ACTN1-205ENST00000538545 PSMD1Q99460 953 aa16.13■□□□□ 0.17
ACTN1-205ENST00000538545 PLIN2Q99541 437 aa16.13■□□□□ 0.17
ACTN1-205ENST00000538545 TRIM5Q9C035 493 aa16.13■□□□□ 0.17
ACTN1-205ENST00000538545 NRBP1Q9UHY1 535 aa16.13■□□□□ 0.17
ACTN1-205ENST00000538545 VIL1P09327 827 aaKnown RBP16.13■□□□□ 0.17
ACTN1-205ENST00000538545 BMP6P22004 513 aa16.13■□□□□ 0.17
ACTN1-205ENST00000538545 ZRSR1Q15695 479 aaKnown RBP16.13■□□□□ 0.17
ACTN1-205ENST00000538545 C17orf53Q8N3J3 647 aaPredicted RBP16.13■□□□□ 0.17
ACTN1-205ENST00000538545 GMLQ99445 158 aa16.13■□□□□ 0.17
ACTN1-205ENST00000538545 JMJD4Q9H9V9 463 aa16.13■□□□□ 0.17
ACTN1-205ENST00000538545 SEC63Q9UGP8 760 aaKnown RBP16.13■□□□□ 0.17
ACTN1-205ENST00000538545 FKBP1AP62942 108 aaKnown RBP16.12■□□□□ 0.17
ACTN1-205ENST00000538545 ZNF543Q08ER8 600 aa16.12■□□□□ 0.17
ACTN1-205ENST00000538545 DLGAP5Q15398 846 aa16.12■□□□□ 0.17
ACTN1-205ENST00000538545 PTPN21Q16825 1174 aa16.12■□□□□ 0.17
ACTN1-205ENST00000538545 SAMD1Q6SPF0 538 aaPredicted RBP16.12■□□□□ 0.17
ACTN1-205ENST00000538545 NIM1KQ8IY84 436 aa16.12■□□□□ 0.17
ACTN1-205ENST00000538545 ANO10Q9NW15 660 aa16.12■□□□□ 0.17
ACTN1-205ENST00000538545 PLIN4Q96Q06 1357 aa16.12■□□□□ 0.17
ACTN1-205ENST00000538545 BECN2A8MW95 431 aa16.12■□□□□ 0.17
ACTN1-205ENST00000538545 NFKBIEO00221 500 aa16.12■□□□□ 0.17
ACTN1-205ENST00000538545 ECE1P42892 770 aa16.12■□□□□ 0.17
ACTN1-205ENST00000538545 HDLBPQ00341 1268 aaKnown RBP16.12■□□□□ 0.17
ACTN1-205ENST00000538545 UBE2SQ16763 222 aa16.12■□□□□ 0.17
ACTN1-205ENST00000538545 LETM2Q2VYF4 491 aa16.12■□□□□ 0.17
ACTN1-205ENST00000538545 ZNF70Q9UC06 446 aaPredicted RBP16.12■□□□□ 0.17
ACTN1-205ENST00000538545 CEP131Q9UPN4 1083 aa16.12■□□□□ 0.17
ACTN1-205ENST00000538545 ASTN2O75129 1339 aaPredicted RBP16.11■□□□□ 0.17
ACTN1-205ENST00000538545 PRELPP51888 382 aa16.11■□□□□ 0.17
ACTN1-205ENST00000538545 DALRD3Q5D0E6 543 aaKnown RBP16.11■□□□□ 0.17
ACTN1-205ENST00000538545 OGFOD1Q8N543 542 aa16.11■□□□□ 0.17
ACTN1-205ENST00000538545 MRIQ9BWK5 157 aa16.11■□□□□ 0.17
ACTN1-205ENST00000538545 DHX36Q9H2U1 1008 aaKnown RBP16.11■□□□□ 0.17
ACTN1-205ENST00000538545 RIOX1Q9H6W3 641 aa16.11■□□□□ 0.17
ACTN1-205ENST00000538545 FAM13BQ9NYF5 915 aa16.11■□□□□ 0.17
ACTN1-205ENST00000538545 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.11■□□□□ 0.17
ACTN1-205ENST00000538545 A0A1W2PRG0 241 aa16.11■□□□□ 0.17
ACTN1-205ENST00000538545 CALML3P27482 149 aa16.11■□□□□ 0.17
ACTN1-205ENST00000538545 ATP2C1P98194 919 aaPredicted RBP16.11■□□□□ 0.17
ACTN1-205ENST00000538545 ICA1Q05084 483 aa16.11■□□□□ 0.17
ACTN1-205ENST00000538545 ZYXQ15942 572 aaKnown RBP16.11■□□□□ 0.17
ACTN1-205ENST00000538545 NLGN2Q8NFZ4 835 aa16.11■□□□□ 0.17
ACTN1-205ENST00000538545 ZNRF3Q9ULT6 936 aa16.11■□□□□ 0.17
ACTN1-205ENST00000538545 GOLGA6L19H0YKK7 550 aa16.1■□□□□ 0.17
ACTN1-205ENST00000538545 SNHG28P0DPA3 235 aa16.1■□□□□ 0.17
ACTN1-205ENST00000538545 ABCB5Q2M3G0 1257 aa16.1■□□□□ 0.17
ACTN1-205ENST00000538545 GJA10Q969M2 543 aa16.1■□□□□ 0.17
ACTN1-205ENST00000538545 EHD4Q9H223 541 aa16.1■□□□□ 0.17
ACTN1-205ENST00000538545 FAM237AA0A1B0GTK4 181 aa16.1■□□□□ 0.17
ACTN1-205ENST00000538545 ACTN4O43707 911 aaKnown RBP16.1■□□□□ 0.17
ACTN1-205ENST00000538545 POLD1P28340 1107 aa16.1■□□□□ 0.17
ACTN1-205ENST00000538545 MDM2Q00987 491 aaPredicted RBP16.1■□□□□ 0.17
ACTN1-205ENST00000538545 ZSCAN30Q86W11 494 aa16.1■□□□□ 0.17
ACTN1-205ENST00000538545 CEP57L1Q8IYX8 460 aa16.1■□□□□ 0.17
ACTN1-205ENST00000538545 ZMYND12Q9H0C1 365 aa16.1■□□□□ 0.17
ACTN1-205ENST00000538545 COBLO75128 1261 aa16.09■□□□□ 0.17
ACTN1-205ENST00000538545 SLC1A4P43007 532 aa16.09■□□□□ 0.17
ACTN1-205ENST00000538545 TATDN1Q6P1N9 297 aa16.09■□□□□ 0.17
ACTN1-205ENST00000538545 C4orf32Q8N8J7 132 aa16.09■□□□□ 0.17
ACTN1-205ENST00000538545 TAOK3Q9H2K8 898 aa16.09■□□□□ 0.17
ACTN1-205ENST00000538545 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.09■□□□□ 0.176e-7■■■■■ 31.5
ACTN1-205ENST00000538545 SH3GLB2Q9NR46 395 aa16.09■□□□□ 0.17
ACTN1-205ENST00000538545 CCNT1O60563 726 aaKnown RBP16.09■□□□□ 0.17
ACTN1-205ENST00000538545 KIAA1755Q5JYT7 1200 aa16.09■□□□□ 0.17
ACTN1-205ENST00000538545 CCDC148Q8NFR7 591 aa16.09■□□□□ 0.17
ACTN1-205ENST00000538545 ACER1Q8TDN7 264 aa16.09■□□□□ 0.17
ACTN1-205ENST00000538545 MTFR1LQ9H019 292 aa16.09■□□□□ 0.17
ACTN1-205ENST00000538545 BLZF1Q9H2G9 400 aa16.09■□□□□ 0.17
ACTN1-205ENST00000538545 WNT10BO00744 389 aa16.09■□□□□ 0.17
ACTN1-205ENST00000538545 NLRP12P59046 1061 aa16.09■□□□□ 0.17
ACTN1-205ENST00000538545 POSTNQ15063 836 aa16.09■□□□□ 0.17
ACTN1-205ENST00000538545 SOGA3Q5TF21 947 aa16.09■□□□□ 0.17
ACTN1-205ENST00000538545 SLFN13Q68D06 897 aa16.09■□□□□ 0.17
ACTN1-205ENST00000538545 DRC7Q8IY82 874 aa16.09■□□□□ 0.17
ACTN1-205ENST00000538545 SMYD4Q8IYR2 804 aaPredicted RBP16.09■□□□□ 0.17
ACTN1-205ENST00000538545 TBCKQ8TEA7 893 aa16.09■□□□□ 0.17
ACTN1-205ENST00000538545 LZTS2Q9BRK4 669 aa16.09■□□□□ 0.17
ACTN1-205ENST00000538545 CNTNAP1P78357 1384 aa16.08■□□□□ 0.17
ACTN1-205ENST00000538545 PCNTO95613 3336 aa16.08■□□□□ 0.17
ACTN1-205ENST00000538545 GREB1LQ9C091 1923 aaPredicted RBP16.08■□□□□ 0.17
ACTN1-205ENST00000538545 F5H6K3 240 aa16.08■□□□□ 0.16
ACTN1-205ENST00000538545 LMOD1P29536 600 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms