RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 LMOD1P29536 600 aaPredicted RBP19.88■□□□□ 0.77
SNX17-210ENST00000537606 TRAPPC10P48553 1259 aa19.88■□□□□ 0.77
SNX17-210ENST00000537606 STAMQ92783 540 aa19.88■□□□□ 0.77
SNX17-210ENST00000537606 SEC63Q9UGP8 760 aaKnown RBP19.88■□□□□ 0.77
SNX17-210ENST00000537606 MAN1B1Q9UKM7 699 aa19.88■□□□□ 0.77
SNX17-210ENST00000537606 SMCO2A6NFE2 343 aa19.88■□□□□ 0.77
SNX17-210ENST00000537606 HOOK1Q9UJC3 728 aaKnown RBP19.88■□□□□ 0.77
SNX17-210ENST00000537606 SF3B2Q13435 895 aaKnown RBP19.87■□□□□ 0.77
SNX17-210ENST00000537606 TTBK2Q6IQ55 1244 aa19.87■□□□□ 0.77
SNX17-210ENST00000537606 RGPD3A6NKT7 1758 aaPredicted RBP19.87■□□□□ 0.77
SNX17-210ENST00000537606 RGPD4Q7Z3J3 1758 aa19.87■□□□□ 0.77
SNX17-210ENST00000537606 PLIN4Q96Q06 1357 aa19.87■□□□□ 0.77
SNX17-210ENST00000537606 C4orf32Q8N8J7 132 aa19.87■□□□□ 0.77
SNX17-210ENST00000537606 COA7Q96BR5 231 aa19.87■□□□□ 0.77
SNX17-210ENST00000537606 PRMT6Q96LA8 375 aaPredicted RBP19.87■□□□□ 0.77
SNX17-210ENST00000537606 ATP1A3P13637 1013 aa19.86■□□□□ 0.77
SNX17-210ENST00000537606 SLC16A2P36021 539 aa19.86■□□□□ 0.77
SNX17-210ENST00000537606 SMARCE1Q969G3 411 aa19.86■□□□□ 0.77
SNX17-210ENST00000537606 ZMYND12Q9H0C1 365 aa19.86■□□□□ 0.77
SNX17-210ENST00000537606 TMEM60Q9H2L4 133 aa19.86■□□□□ 0.77
SNX17-210ENST00000537606 MYH8P13535 1937 aa19.86■□□□□ 0.77
SNX17-210ENST00000537606 SMC2O95347 1197 aa19.86■□□□□ 0.77
SNX17-210ENST00000537606 KCTD1Q719H9 257 aa19.86■□□□□ 0.77
SNX17-210ENST00000537606 TTLL6Q8N841 843 aa19.86■□□□□ 0.77
SNX17-210ENST00000537606 MRIQ9BWK5 157 aa19.86■□□□□ 0.77
SNX17-210ENST00000537606 XPO4Q9C0E2 1151 aaKnown RBP19.86■□□□□ 0.77
SNX17-210ENST00000537606 IFNKQ9P0W0 207 aa19.86■□□□□ 0.77
SNX17-210ENST00000537606 MORC2Q9Y6X9 1032 aaPredicted RBP19.86■□□□□ 0.77
SNX17-210ENST00000537606 RAD17O75943 681 aa19.85■□□□□ 0.77
SNX17-210ENST00000537606 DPEP1P16444 411 aa19.85■□□□□ 0.77
SNX17-210ENST00000537606 BAG6P46379 1132 aa19.85■□□□□ 0.77
SNX17-210ENST00000537606 FKBP1AP62942 108 aaKnown RBP19.85■□□□□ 0.77
SNX17-210ENST00000537606 CFAP100Q494V2 611 aa19.85■□□□□ 0.77
SNX17-210ENST00000537606 HSP90AA4PQ58FG1 418 aa19.85■□□□□ 0.77
SNX17-210ENST00000537606 DAGLBQ8NCG7 672 aa19.85■□□□□ 0.77
SNX17-210ENST00000537606 HSD3B7Q9H2F3 369 aa19.85■□□□□ 0.77
SNX17-210ENST00000537606 RIOX1Q9H6W3 641 aa19.85■□□□□ 0.77
SNX17-210ENST00000537606 ZNF277Q9NRM2 450 aaPredicted RBP19.85■□□□□ 0.77
SNX17-210ENST00000537606 BIN2Q9UBW5 565 aaPredicted RBP19.85■□□□□ 0.77
SNX17-210ENST00000537606 SERPINA10Q9UK55 444 aa19.85■□□□□ 0.77
SNX17-210ENST00000537606 SMTNL1A8MU46 457 aa19.85■□□□□ 0.77
SNX17-210ENST00000537606 JAKMIP3Q5VZ66 844 aa19.85■□□□□ 0.77
SNX17-210ENST00000537606 LRRC8AQ8IWT6 810 aa19.85■□□□□ 0.77
SNX17-210ENST00000537606 PAGE5Q96GU1 130 aa19.85■□□□□ 0.77
SNX17-210ENST00000537606 PI4KBQ9UBF8 816 aa19.85■□□□□ 0.77
SNX17-210ENST00000537606 SLFN14P0C7P3 912 aa19.84■□□□□ 0.77
SNX17-210ENST00000537606 SARSP49591 514 aaKnown RBP19.84■□□□□ 0.77
SNX17-210ENST00000537606 TERF1P54274 439 aa19.84■□□□□ 0.77
SNX17-210ENST00000537606 HDLBPQ00341 1268 aaKnown RBP19.84■□□□□ 0.77
SNX17-210ENST00000537606 SOGA3Q5TF21 947 aa19.84■□□□□ 0.77
SNX17-210ENST00000537606 GALNT17Q6IS24 598 aa19.84■□□□□ 0.77
SNX17-210ENST00000537606 ELOA2Q8IYF1 753 aaPredicted RBP19.84■□□□□ 0.77
SNX17-210ENST00000537606 IDI2Q9BXS1 227 aa19.84■□□□□ 0.77
SNX17-210ENST00000537606 TMEM260Q9NX78 707 aa19.84■□□□□ 0.77
SNX17-210ENST00000537606 SNHG28P0DPA3 235 aa19.84■□□□□ 0.77
SNX17-210ENST00000537606 CCDC96Q2M329 555 aa19.84■□□□□ 0.77
SNX17-210ENST00000537606 CERKLQ49MI3 558 aaPredicted RBP19.84■□□□□ 0.77
SNX17-210ENST00000537606 ASPRV1Q53RT3 343 aa19.84■□□□□ 0.77
SNX17-210ENST00000537606 KANK3Q6NY19 840 aa19.84■□□□□ 0.77
SNX17-210ENST00000537606 C6orf50Q9HD87 102 aa19.84■□□□□ 0.77
SNX17-210ENST00000537606 PP2D1A8MPX8 630 aa19.83■□□□□ 0.77
SNX17-210ENST00000537606 GDF11O95390 407 aa19.83■□□□□ 0.77
SNX17-210ENST00000537606 ZNF543Q08ER8 600 aa19.83■□□□□ 0.77
SNX17-210ENST00000537606 LETM2Q2VYF4 491 aa19.83■□□□□ 0.77
SNX17-210ENST00000537606 ADGRF4Q8IZF3 695 aa19.83■□□□□ 0.77
SNX17-210ENST00000537606 SUPT20HQ8NEM7 779 aa19.83■□□□□ 0.77
SNX17-210ENST00000537606 TRIM34Q9BYJ4 488 aa19.83■□□□□ 0.77
SNX17-210ENST00000537606 EHD4Q9H223 541 aa19.83■□□□□ 0.77
SNX17-210ENST00000537606 DHX36Q9H2U1 1008 aaKnown RBP19.83■□□□□ 0.77
SNX17-210ENST00000537606 KCNA3P22001 575 aa19.83■□□□□ 0.76
SNX17-210ENST00000537606 SMARCA1P28370 1054 aa19.83■□□□□ 0.76
SNX17-210ENST00000537606 MYL5Q02045 173 aa19.83■□□□□ 0.76
SNX17-210ENST00000537606 NT5DC1Q5TFE4 455 aa19.83■□□□□ 0.76
SNX17-210ENST00000537606 CC2D2BQ6DHV5 1058 aa19.83■□□□□ 0.76
SNX17-210ENST00000537606 CCDC12Q8WUD4 166 aaPredicted RBP19.83■□□□□ 0.76
SNX17-210ENST00000537606 BLZF1Q9H2G9 400 aa19.83■□□□□ 0.76
SNX17-210ENST00000537606 FANCLQ9NW38 375 aa19.83■□□□□ 0.76
SNX17-210ENST00000537606 ZBTB12Q9Y330 459 aaPredicted RBP19.83■□□□□ 0.76
SNX17-210ENST00000537606 IKBKBO14920 756 aa19.82■□□□□ 0.76
SNX17-210ENST00000537606 EEF2P13639 858 aaKnown RBP19.82■□□□□ 0.76
SNX17-210ENST00000537606 GNA11P29992 359 aa19.82■□□□□ 0.76
SNX17-210ENST00000537606 TPM4P67936 248 aa19.82■□□□□ 0.76
SNX17-210ENST00000537606 MORC3Q14149 939 aa19.82■□□□□ 0.76
SNX17-210ENST00000537606 PTPN21Q16825 1174 aa19.82■□□□□ 0.76
SNX17-210ENST00000537606 TRMT44Q8IYL2 757 aaKnown RBP19.82■□□□□ 0.76
SNX17-210ENST00000537606 LARGE2Q8N3Y3 721 aa19.82■□□□□ 0.76
SNX17-210ENST00000537606 JMJD4Q9H9V9 463 aa19.82■□□□□ 0.76
SNX17-210ENST00000537606 CCNT1O60563 726 aaKnown RBP19.82■□□□□ 0.76
SNX17-210ENST00000537606 RBM10P98175 930 aaKnown RBP19.82■□□□□ 0.76
SNX17-210ENST00000537606 FMR1Q06787 632 aaKnown RBP eCLIP19.82■□□□□ 0.76
SNX17-210ENST00000537606 SEPT2Q15019 361 aa19.82■□□□□ 0.76
SNX17-210ENST00000537606 CCDC93Q567U6 631 aa19.82■□□□□ 0.76
SNX17-210ENST00000537606 TSC1Q92574 1164 aa19.82■□□□□ 0.76
SNX17-210ENST00000537606 MYO3BQ8WXR4 1341 aa19.81■□□□□ 0.76
SNX17-210ENST00000537606 CLRN2A0PK11 232 aa19.81■□□□□ 0.76
SNX17-210ENST00000537606 ARL6IP4Q66PJ3 421 aaKnown RBP19.81■□□□□ 0.76
SNX17-210ENST00000537606 DTHD1Q6ZMT9 781 aa19.81■□□□□ 0.76
SNX17-210ENST00000537606 SH3RF1Q7Z6J0 888 aa19.81■□□□□ 0.76
SNX17-210ENST00000537606 CCDC17Q96LX7 622 aa19.81■□□□□ 0.76
SNX17-210ENST00000537606 C16orf45Q96MC5 204 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms