RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 TINF2Q9BSI4 451 aa11.69□□□□□ -0.54
CCDC170-202ENST00000537358 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCDC170-202ENST00000537358 FEM1BQ9UK73 627 aa11.69□□□□□ -0.54
CCDC170-202ENST00000537358 ATP11BQ9Y2G3 1177 aa11.69□□□□□ -0.54
CCDC170-202ENST00000537358 SMCHD1A6NHR9 2005 aa11.69□□□□□ -0.54
CCDC170-202ENST00000537358 PRDM1O75626 825 aa11.68□□□□□ -0.54
CCDC170-202ENST00000537358 IGHA2P01877 340 aa11.68□□□□□ -0.54
CCDC170-202ENST00000537358 PGK2P07205 417 aa11.68□□□□□ -0.54
CCDC170-202ENST00000537358 FDX1P10109 184 aa11.68□□□□□ -0.54
CCDC170-202ENST00000537358 SLC4A3P48751 1232 aa11.68□□□□□ -0.54
CCDC170-202ENST00000537358 RRP1P56182 461 aaKnown RBP11.68□□□□□ -0.54
CCDC170-202ENST00000537358 RTP1P59025 263 aa11.68□□□□□ -0.54
CCDC170-202ENST00000537358 MDM2Q00987 491 aaPredicted RBP11.68□□□□□ -0.54
CCDC170-202ENST00000537358 IKQ13123 557 aaPredicted RBP11.68□□□□□ -0.54
CCDC170-202ENST00000537358 LRIT3Q3SXY7 679 aa11.68□□□□□ -0.54
CCDC170-202ENST00000537358 RNF180Q86T96 592 aa11.68□□□□□ -0.54
CCDC170-202ENST00000537358 MSL3Q8N5Y2 521 aaKnown RBP11.68□□□□□ -0.54
CCDC170-202ENST00000537358 MKL1Q969V6 931 aa11.68□□□□□ -0.54
CCDC170-202ENST00000537358 KIFC2Q96AC6 838 aa11.68□□□□□ -0.54
CCDC170-202ENST00000537358 CEP95Q96GE4 821 aa11.68□□□□□ -0.54
CCDC170-202ENST00000537358 NUP88Q99567 741 aaPredicted RBP11.68□□□□□ -0.54
CCDC170-202ENST00000537358 EPB41L4AQ9HCS5 686 aaPredicted RBP11.68□□□□□ -0.54
CCDC170-202ENST00000537358 XPNPEP3Q9NQH7 507 aa11.68□□□□□ -0.54
CCDC170-202ENST00000537358 MTMR4Q9NYA4 1195 aa11.68□□□□□ -0.54
CCDC170-202ENST00000537358 FBXO40Q9UH90 709 aa11.68□□□□□ -0.54
CCDC170-202ENST00000537358 ZNF214Q9UL59 606 aaPredicted RBP11.68□□□□□ -0.54
CCDC170-202ENST00000537358 PCDHB15Q9Y5E8 787 aa11.68□□□□□ -0.54
CCDC170-202ENST00000537358 SZT2Q5T011 3432 aa11.68□□□□□ -0.54
CCDC170-202ENST00000537358 SOX1O00570 391 aaPredicted RBP11.67□□□□□ -0.54
CCDC170-202ENST00000537358 ATP2A1O14983 1001 aa11.67□□□□□ -0.54
CCDC170-202ENST00000537358 AKR1A1P14550 325 aa11.67□□□□□ -0.54
CCDC170-202ENST00000537358 PPARAQ07869 468 aa11.67□□□□□ -0.54
CCDC170-202ENST00000537358 LRRC41Q15345 812 aa11.67□□□□□ -0.54
CCDC170-202ENST00000537358 ZNF792Q3KQV3 632 aa11.67□□□□□ -0.54
CCDC170-202ENST00000537358 ZMYM1Q5SVZ6 1142 aa11.67□□□□□ -0.54
CCDC170-202ENST00000537358 PRAMEF19Q5SWL8 479 aa11.67□□□□□ -0.54
CCDC170-202ENST00000537358 ANKRD45Q5TZF3 282 aa11.67□□□□□ -0.54
CCDC170-202ENST00000537358 SLC39A5Q6ZMH5 540 aa11.67□□□□□ -0.54
CCDC170-202ENST00000537358 CPXCR1Q8N123 301 aa11.67□□□□□ -0.54
CCDC170-202ENST00000537358 GMCL1P1Q8NEA9 526 aa11.67□□□□□ -0.54
CCDC170-202ENST00000537358 REPS2Q8NFH8 660 aa11.67□□□□□ -0.54
CCDC170-202ENST00000537358 PI4K2BQ8TCG2 481 aa11.67□□□□□ -0.54
CCDC170-202ENST00000537358 LRCH3Q96II8 777 aa11.67□□□□□ -0.54
CCDC170-202ENST00000537358 PRDM5Q9NQX1 630 aaPredicted RBP11.67□□□□□ -0.54
CCDC170-202ENST00000537358 DNAH12Q6ZR08 3092 aa11.67□□□□□ -0.54
CCDC170-202ENST00000537358 PLIN4Q96Q06 1357 aa11.67□□□□□ -0.54
CCDC170-202ENST00000537358 SYNGAP1Q96PV0 1343 aa11.66□□□□□ -0.54
CCDC170-202ENST00000537358 IGKV6D-41A0A0C4DH26 115 aa11.66□□□□□ -0.54
CCDC170-202ENST00000537358 TSPY2A6NKD2 308 aa11.66□□□□□ -0.54
CCDC170-202ENST00000537358 BMP3P12645 472 aa11.66□□□□□ -0.54
CCDC170-202ENST00000537358 ADCYAP1R1P41586 468 aa11.66□□□□□ -0.54
CCDC170-202ENST00000537358 STAT2P52630 851 aa11.66□□□□□ -0.54
CCDC170-202ENST00000537358 OAZ1P54368 228 aa11.66□□□□□ -0.54
CCDC170-202ENST00000537358 TFAP4Q01664 338 aa11.66□□□□□ -0.54
CCDC170-202ENST00000537358 FAM47AQ5JRC9 791 aa11.66□□□□□ -0.54
CCDC170-202ENST00000537358 SLFN13Q68D06 897 aa11.66□□□□□ -0.54
CCDC170-202ENST00000537358 FAM160B2Q86V87 743 aa11.66□□□□□ -0.54
CCDC170-202ENST00000537358 LRRC47Q8N1G4 583 aaKnown RBP11.66□□□□□ -0.54
CCDC170-202ENST00000537358 ANKRD35Q8N283 1001 aa11.66□□□□□ -0.54
CCDC170-202ENST00000537358 CHST13Q8NET6 341 aa11.66□□□□□ -0.54
CCDC170-202ENST00000537358 NEDD1Q8NHV4 660 aa11.66□□□□□ -0.54
CCDC170-202ENST00000537358 CHURC1Q8WUH1 139 aa11.66□□□□□ -0.54
CCDC170-202ENST00000537358 EVI5LQ96CN4 794 aa11.66□□□□□ -0.54
CCDC170-202ENST00000537358 SEC62Q99442 399 aaKnown RBP11.66□□□□□ -0.54
CCDC170-202ENST00000537358 SLC1A4P43007 532 aa11.65□□□□□ -0.54
CCDC170-202ENST00000537358 AAMPQ13685 434 aa11.65□□□□□ -0.54
CCDC170-202ENST00000537358 DEFB123Q8N688 67 aa11.65□□□□□ -0.54
CCDC170-202ENST00000537358 OTUD7AQ8TE49 926 aaPredicted RBP11.65□□□□□ -0.54
CCDC170-202ENST00000537358 FERMT2Q96AC1 680 aa11.65□□□□□ -0.54
CCDC170-202ENST00000537358 SPC25Q9HBM1 224 aa11.65□□□□□ -0.54
CCDC170-202ENST00000537358 SLC38A10Q9HBR0 1119 aa11.65□□□□□ -0.54
CCDC170-202ENST00000537358 RAVER2Q9HCJ3 691 aaKnown RBP11.65□□□□□ -0.54
CCDC170-202ENST00000537358 FAM184BQ9ULE4 1060 aa11.65□□□□□ -0.54
CCDC170-202ENST00000537358 STX8Q9UNK0 236 aa11.65□□□□□ -0.54
CCDC170-202ENST00000537358 TMEM232C9JQI7 657 aa11.64□□□□□ -0.55
CCDC170-202ENST00000537358 TRIM60Q495X7 471 aa11.64□□□□□ -0.55
CCDC170-202ENST00000537358 C1orf53Q5VUE5 145 aa11.64□□□□□ -0.55
CCDC170-202ENST00000537358 ZNF467Q7Z7K2 595 aaPredicted RBP11.64□□□□□ -0.55
CCDC170-202ENST00000537358 TICAM2Q86XR7 235 aa11.64□□□□□ -0.55
CCDC170-202ENST00000537358 NUP133Q8WUM0 1156 aa11.64□□□□□ -0.55
CCDC170-202ENST00000537358 CRBNQ96SW2 442 aa11.64□□□□□ -0.55
CCDC170-202ENST00000537358 HELLSQ9NRZ9 838 aa11.64□□□□□ -0.55
CCDC170-202ENST00000537358 TOMM22Q9NS69 142 aa11.64□□□□□ -0.55
CCDC170-202ENST00000537358 ZHX1Q9UKY1 873 aaPredicted RBP11.64□□□□□ -0.55
CCDC170-202ENST00000537358 PHF24Q9UPV7 400 aa11.64□□□□□ -0.55
CCDC170-202ENST00000537358 FARP1Q9Y4F1 1045 aaPredicted RBP11.64□□□□□ -0.55
CCDC170-202ENST00000537358 LTBP2Q14767 1821 aa11.63□□□□□ -0.55
CCDC170-202ENST00000537358 RANBP6O60518 1105 aaKnown RBP11.63□□□□□ -0.55
CCDC170-202ENST00000537358 PGK1P00558 417 aa11.63□□□□□ -0.55
CCDC170-202ENST00000537358 ZNF865P0CJ78 1059 aaPredicted RBP11.63□□□□□ -0.55
CCDC170-202ENST00000537358 PDE1AP54750 535 aa11.63□□□□□ -0.55
CCDC170-202ENST00000537358 HDAC1Q13547 482 aaPredicted RBP11.63□□□□□ -0.55
CCDC170-202ENST00000537358 SNX17Q15036 470 aa11.63□□□□□ -0.55
CCDC170-202ENST00000537358 TKFCQ3LXA3 575 aa11.63□□□□□ -0.55
CCDC170-202ENST00000537358 MAMDC4Q6UXC1 1216 aa11.63□□□□□ -0.55
CCDC170-202ENST00000537358 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.63□□□□□ -0.55
CCDC170-202ENST00000537358 STAG1Q8WVM7 1258 aa11.63□□□□□ -0.55
CCDC170-202ENST00000537358 GMCL1Q96IK5 515 aa11.63□□□□□ -0.55
CCDC170-202ENST00000537358 TSEN34Q9BSV6 310 aaKnown RBP11.63□□□□□ -0.55
CCDC170-202ENST00000537358 ABHD16BQ9H3Z7 469 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms