RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 KCNJ6P48051 423 aa7.69□□□□□ -1.18
PRKDC-208ENST00000536710 CYP27A1Q02318 531 aa7.69□□□□□ -1.18
PRKDC-208ENST00000536710 DUSP27Q5VZP5 1158 aa7.69□□□□□ -1.18
PRKDC-208ENST00000536710 ZNF765Q7L2R6 523 aa7.69□□□□□ -1.18
PRKDC-208ENST00000536710 ZCRB1Q8TBF4 217 aaKnown RBP7.69□□□□□ -1.18
PRKDC-208ENST00000536710 MRGPRX3Q96LB0 322 aa7.69□□□□□ -1.18
PRKDC-208ENST00000536710 Q96M66 194 aa7.69□□□□□ -1.18
PRKDC-208ENST00000536710 HEXIM2Q96MH2 286 aaKnown RBP7.69□□□□□ -1.18
PRKDC-208ENST00000536710 CHST7Q9NS84 486 aa7.69□□□□□ -1.18
PRKDC-208ENST00000536710 MINPP1Q9UNW1 487 aa7.69□□□□□ -1.18
PRKDC-208ENST00000536710 hCG_2014768A0A024R1R8 64 aa7.68□□□□□ -1.18
PRKDC-208ENST00000536710 SIGLEC6O43699 453 aa7.68□□□□□ -1.18
PRKDC-208ENST00000536710 PRAMEF1O95521 474 aa7.68□□□□□ -1.18
PRKDC-208ENST00000536710 FGFR1P11362 822 aa7.68□□□□□ -1.18
PRKDC-208ENST00000536710 CBX2Q14781 532 aaPredicted RBP7.68□□□□□ -1.18
PRKDC-208ENST00000536710 DPY19L1Q2PZI1 675 aa7.68□□□□□ -1.18
PRKDC-208ENST00000536710 CWF19L1Q69YN2 538 aaKnown RBP7.68□□□□□ -1.18
PRKDC-208ENST00000536710 GTF2IRD2BQ6EKJ0 949 aa7.68□□□□□ -1.18
PRKDC-208ENST00000536710 GTF2IRD2Q86UP8 949 aa7.68□□□□□ -1.18
PRKDC-208ENST00000536710 SHISA5Q8N114 240 aa7.68□□□□□ -1.18
PRKDC-208ENST00000536710 MFSD4AQ8N468 514 aa7.68□□□□□ -1.18
PRKDC-208ENST00000536710 GATA6Q92908 595 aa7.68□□□□□ -1.18
PRKDC-208ENST00000536710 GPATCH3Q96I76 525 aa7.68□□□□□ -1.18
PRKDC-208ENST00000536710 PLAAQ9Y263 795 aa7.68□□□□□ -1.18
PRKDC-208ENST00000536710 GPR55Q9Y2T6 319 aaPredicted RBP7.68□□□□□ -1.18
PRKDC-208ENST00000536710 VAMP4O75379 141 aa7.67□□□□□ -1.18
PRKDC-208ENST00000536710 RAPGEF3O95398 923 aa7.67□□□□□ -1.18
PRKDC-208ENST00000536710 SNRPB2P08579 225 aaKnown RBP7.67□□□□□ -1.18
PRKDC-208ENST00000536710 SUMO1P63165 101 aaKnown RBP7.67□□□□□ -1.18
PRKDC-208ENST00000536710 AMPD2Q01433 879 aa7.67□□□□□ -1.18
PRKDC-208ENST00000536710 TNK2Q07912 1038 aa7.67□□□□□ -1.18
PRKDC-208ENST00000536710 DALRD3Q5D0E6 543 aaKnown RBP7.67□□□□□ -1.18
PRKDC-208ENST00000536710 GPAT2Q6NUI2 795 aa7.67□□□□□ -1.18
PRKDC-208ENST00000536710 PRR23CQ6ZRP0 262 aa7.67□□□□□ -1.18
PRKDC-208ENST00000536710 FAM214BQ7L5A3 538 aa7.67□□□□□ -1.18
PRKDC-208ENST00000536710 DHX37Q8IY37 1157 aaKnown RBP7.67□□□□□ -1.18
PRKDC-208ENST00000536710 KISS1RQ969F8 398 aaPredicted RBP7.67□□□□□ -1.18
PRKDC-208ENST00000536710 NCOA5Q9HCD5 579 aaKnown RBP7.67□□□□□ -1.18
PRKDC-208ENST00000536710 PRR13Q9NZ81 148 aa7.67□□□□□ -1.18
PRKDC-208ENST00000536710 H0Y8X5 98 aa7.66□□□□□ -1.18
PRKDC-208ENST00000536710 IGF2BP3O00425 579 aaKnown RBP eCLIP7.66□□□□□ -1.18
PRKDC-208ENST00000536710 ITIH2P19823 946 aa7.66□□□□□ -1.18
PRKDC-208ENST00000536710 IGBP1P78318 339 aa7.66□□□□□ -1.18
PRKDC-208ENST00000536710 PABPC4Q13310 644 aaKnown RBP eCLIP7.66□□□□□ -1.18
PRKDC-208ENST00000536710 GRB10Q13322 594 aa7.66□□□□□ -1.18
PRKDC-208ENST00000536710 CDKAL1Q5VV42 579 aa7.66□□□□□ -1.18
PRKDC-208ENST00000536710 RNF43Q68DV7 783 aa7.66□□□□□ -1.18
PRKDC-208ENST00000536710 NIM1KQ8IY84 436 aa7.66□□□□□ -1.18
PRKDC-208ENST00000536710 OSBP2Q969R2 916 aa7.66□□□□□ -1.18
PRKDC-208ENST00000536710 COL4A3BPQ9Y5P4 624 aa7.66□□□□□ -1.18
PRKDC-208ENST00000536710 CAPN6Q9Y6Q1 641 aa7.66□□□□□ -1.18
PRKDC-208ENST00000536710 SHISA3A0PJX4 238 aa7.65□□□□□ -1.18
PRKDC-208ENST00000536710 IRS4O14654 1257 aaPredicted RBP7.65□□□□□ -1.18
PRKDC-208ENST00000536710 PLD2O14939 933 aa7.65□□□□□ -1.18
PRKDC-208ENST00000536710 F13BP05160 661 aa7.65□□□□□ -1.18
PRKDC-208ENST00000536710 ZNF865P0CJ78 1059 aaPredicted RBP7.65□□□□□ -1.18
PRKDC-208ENST00000536710 ECI1P42126 302 aa7.65□□□□□ -1.18
PRKDC-208ENST00000536710 MASP1P48740 699 aa7.65□□□□□ -1.18
PRKDC-208ENST00000536710 ANAPC15P60006 121 aa7.65□□□□□ -1.18
PRKDC-208ENST00000536710 POU4F1Q01851 419 aa7.65□□□□□ -1.18
PRKDC-208ENST00000536710 SF1Q15637 639 aaKnown RBP7.65□□□□□ -1.18
PRKDC-208ENST00000536710 CRTC3Q6UUV7 619 aa7.65□□□□□ -1.18
PRKDC-208ENST00000536710 FAM181AQ8N9Y4 354 aa7.65□□□□□ -1.18
PRKDC-208ENST00000536710 PIWIL2Q8TC59 973 aaKnown RBP7.65□□□□□ -1.18
PRKDC-208ENST00000536710 KCTD13Q8WZ19 329 aa7.65□□□□□ -1.18
PRKDC-208ENST00000536710 NINJ1Q92982 152 aa7.65□□□□□ -1.18
PRKDC-208ENST00000536710 OSBPL1AQ9BXW6 950 aa7.65□□□□□ -1.18
PRKDC-208ENST00000536710 TMX1Q9H3N1 280 aa7.65□□□□□ -1.18
PRKDC-208ENST00000536710 LRRC4CQ9HCJ2 640 aa7.65□□□□□ -1.18
PRKDC-208ENST00000536710 ATG3Q9NT62 314 aa7.65□□□□□ -1.18
PRKDC-208ENST00000536710 WDR64B1ANS9 1081 aa7.64□□□□□ -1.19
PRKDC-208ENST00000536710 GSNP06396 782 aa7.64□□□□□ -1.19
PRKDC-208ENST00000536710 CD3EP07766 207 aa7.64□□□□□ -1.19
PRKDC-208ENST00000536710 HOXC12P31275 282 aa7.64□□□□□ -1.19
PRKDC-208ENST00000536710 NFIAQ12857 509 aa7.64□□□□□ -1.19
PRKDC-208ENST00000536710 C22orf34Q6ZV56 151 aa7.64□□□□□ -1.19
PRKDC-208ENST00000536710 MFSD3Q96ES6 412 aa7.64□□□□□ -1.19
PRKDC-208ENST00000536710 NKX2-4Q9H2Z4 354 aa7.64□□□□□ -1.19
PRKDC-208ENST00000536710 TRIT1Q9H3H1 467 aaKnown RBP7.64□□□□□ -1.19
PRKDC-208ENST00000536710 TPSG1Q9NRR2 321 aa7.64□□□□□ -1.19
PRKDC-208ENST00000536710 GPATCH2Q9NW75 528 aa7.64□□□□□ -1.19
PRKDC-208ENST00000536710 NDOR1Q9UHB4 597 aa7.64□□□□□ -1.19
PRKDC-208ENST00000536710 SFMBT1Q9UHJ3 866 aa7.64□□□□□ -1.19
PRKDC-208ENST00000536710 BLACEA4D250 179 aa7.63□□□□□ -1.19
PRKDC-208ENST00000536710 STXBP3O00186 592 aa7.63□□□□□ -1.19
PRKDC-208ENST00000536710 DLX3O60479 287 aa7.63□□□□□ -1.19
PRKDC-208ENST00000536710 MYCLP1P12525 358 aaPredicted RBP7.63□□□□□ -1.19
PRKDC-208ENST00000536710 CNGA1P29973 690 aa7.63□□□□□ -1.19
PRKDC-208ENST00000536710 GFRA1P56159 465 aa7.63□□□□□ -1.19
PRKDC-208ENST00000536710 PRSS53Q2L4Q9 553 aa7.63□□□□□ -1.19
PRKDC-208ENST00000536710 FNDC3BQ53EP0 1204 aaKnown RBP7.63□□□□□ -1.19
PRKDC-208ENST00000536710 TMEM145Q8NBT3 493 aa7.63□□□□□ -1.19
PRKDC-208ENST00000536710 ENOX1Q8TC92 643 aaKnown RBP7.63□□□□□ -1.19
PRKDC-208ENST00000536710 CCDC140Q96MF4 163 aa7.63□□□□□ -1.19
PRKDC-208ENST00000536710 DBNDD2Q9BQY9 259 aa7.63□□□□□ -1.19
PRKDC-208ENST00000536710 METTL22Q9BUU2 404 aaPredicted RBP7.63□□□□□ -1.19
PRKDC-208ENST00000536710 HDAC8Q9BY41 377 aa7.63□□□□□ -1.19
PRKDC-208ENST00000536710 MRPL4Q9BYD3 311 aaKnown RBP7.63□□□□□ -1.19
PRKDC-208ENST00000536710 PCDH12Q9NPG4 1184 aa7.63□□□□□ -1.19
PRKDC-208ENST00000536710 STK17AQ9UEE5 414 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms