RNA–Protein interactions for RNA: ENST00000536000.1

VPS37C-203, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-203ENST00000536000 CPXCR1Q8N123 301 aa14.99□□□□□ -0.01
VPS37C-203ENST00000536000 NKX2-3Q8TAU0 364 aa14.99□□□□□ -0.01
VPS37C-203ENST00000536000 DCAF4Q8WV16 495 aa14.99□□□□□ -0.01
VPS37C-203ENST00000536000 PLA2G6O60733 806 aa14.98□□□□□ -0.01
VPS37C-203ENST00000536000 HMGCRP04035 888 aa14.98□□□□□ -0.01
VPS37C-203ENST00000536000 FCER1AP12319 257 aa14.98□□□□□ -0.01
VPS37C-203ENST00000536000 EN2P19622 333 aaPredicted RBP14.98□□□□□ -0.01
VPS37C-203ENST00000536000 COPB2P35606 906 aa14.98□□□□□ -0.01
VPS37C-203ENST00000536000 GRB14Q14449 540 aa14.98□□□□□ -0.01
VPS37C-203ENST00000536000 CCDC96Q2M329 555 aa14.98□□□□□ -0.01
VPS37C-203ENST00000536000 REPS2Q8NFH8 660 aa14.98□□□□□ -0.01
VPS37C-203ENST00000536000 ZSCAN10Q96SZ4 725 aaPredicted RBP14.98□□□□□ -0.01
VPS37C-203ENST00000536000 UNC93B1Q9H1C4 597 aa14.98□□□□□ -0.01
VPS37C-203ENST00000536000 SLC5A4Q9NY91 659 aa14.98□□□□□ -0.01
VPS37C-203ENST00000536000 RBM8AQ9Y5S9 174 aaKnown RBP14.98□□□□□ -0.01
VPS37C-203ENST00000536000 CDC45O75419 566 aa14.97□□□□□ -0.01
VPS37C-203ENST00000536000 GJB1P08034 283 aa14.97□□□□□ -0.01
VPS37C-203ENST00000536000 ZKSCAN1P17029 563 aaPredicted RBP14.97□□□□□ -0.01
VPS37C-203ENST00000536000 ADORA2AP29274 412 aa14.97□□□□□ -0.01
VPS37C-203ENST00000536000 SNRNP48Q6IEG0 339 aaKnown RBP14.97□□□□□ -0.01
VPS37C-203ENST00000536000 TRIB2Q92519 343 aa14.97□□□□□ -0.01
VPS37C-203ENST00000536000 ANKS1AQ92625 1134 aa14.97□□□□□ -0.01
VPS37C-203ENST00000536000 APBA2Q99767 749 aa14.97□□□□□ -0.01
VPS37C-203ENST00000536000 UBAC1Q9BSL1 405 aa14.97□□□□□ -0.01
VPS37C-203ENST00000536000 TEX13BQ9BXU2 312 aa14.97□□□□□ -0.01
VPS37C-203ENST00000536000 LSG1Q9H089 658 aaKnown RBP14.97□□□□□ -0.01
VPS37C-203ENST00000536000 SLC38A10Q9HBR0 1119 aa14.97□□□□□ -0.01
VPS37C-203ENST00000536000 RAVER2Q9HCJ3 691 aaKnown RBP14.97□□□□□ -0.01
VPS37C-203ENST00000536000 ANO2Q9NQ90 1003 aa14.97□□□□□ -0.01
VPS37C-203ENST00000536000 ZNF214Q9UL59 606 aaPredicted RBP14.97□□□□□ -0.01
VPS37C-203ENST00000536000 E7EWF7 191 aa14.96□□□□□ -0.01
VPS37C-203ENST00000536000 ATP2A1O14983 1001 aa14.96□□□□□ -0.01
VPS37C-203ENST00000536000 HOXC6P09630 235 aa14.96□□□□□ -0.01
VPS37C-203ENST00000536000 OAZ1P54368 228 aa14.96□□□□□ -0.01
VPS37C-203ENST00000536000 CCL14Q16627 93 aa14.96□□□□□ -0.01
VPS37C-203ENST00000536000 RALYLQ86SE5 291 aaKnown RBP14.96□□□□□ -0.01
VPS37C-203ENST00000536000 ABRAQ8N0Z2 381 aa14.96□□□□□ -0.01
VPS37C-203ENST00000536000 NCOA7Q8NI08 942 aa14.96□□□□□ -0.01
VPS37C-203ENST00000536000 NPLOC4Q8TAT6 608 aa14.96□□□□□ -0.01
VPS37C-203ENST00000536000 MMP19Q99542 508 aa14.96□□□□□ -0.01
VPS37C-203ENST00000536000 KAT14Q9H8E8 782 aa14.96□□□□□ -0.01
VPS37C-203ENST00000536000 HMX1Q9NP08 348 aaPredicted RBP14.96□□□□□ -0.01
VPS37C-203ENST00000536000 GPCPD1Q9NPB8 672 aa14.96□□□□□ -0.01
VPS37C-203ENST00000536000 RPTORQ8N122 1335 aa14.95□□□□□ -0.02
VPS37C-203ENST00000536000 TRIM32Q13049 653 aa14.95□□□□□ -0.02
VPS37C-203ENST00000536000 KCTD2Q14681 263 aa14.95□□□□□ -0.02
VPS37C-203ENST00000536000 MFSD14CQ5VZR4 134 aa14.95□□□□□ -0.02
VPS37C-203ENST00000536000 TTBK2Q6IQ55 1244 aa14.95□□□□□ -0.02
VPS37C-203ENST00000536000 CYB5R4Q7L1T6 521 aa14.95□□□□□ -0.02
VPS37C-203ENST00000536000 PNMA1Q8ND90 353 aa14.95□□□□□ -0.02
VPS37C-203ENST00000536000 PRR12Q9ULL5 1215 aa14.95□□□□□ -0.02
VPS37C-203ENST00000536000 RIPK3Q9Y572 518 aa14.95□□□□□ -0.02
VPS37C-203ENST00000536000 TNKSO95271 1327 aa14.94□□□□□ -0.02
VPS37C-203ENST00000536000 FRMPD2Q68DX3 1309 aaPredicted RBP14.94□□□□□ -0.02
VPS37C-203ENST00000536000 PLXNB2O15031 1838 aa14.94□□□□□ -0.02
VPS37C-203ENST00000536000 PARP14Q460N5 1801 aa14.94□□□□□ -0.02
VPS37C-203ENST00000536000 ZNFX1Q9P2E3 1918 aaKnown RBP14.94□□□□□ -0.02
VPS37C-203ENST00000536000 ERICH2A1L162 156 aa14.94□□□□□ -0.02
VPS37C-203ENST00000536000 COBLO75128 1261 aa14.94□□□□□ -0.02
VPS37C-203ENST00000536000 SGPL1O95470 568 aa14.94□□□□□ -0.02
VPS37C-203ENST00000536000 TFRCP02786 760 aaKnown RBP14.94□□□□□ -0.02
VPS37C-203ENST00000536000 PDHBP11177 359 aa14.94□□□□□ -0.02
VPS37C-203ENST00000536000 SLC16A2P36021 539 aa14.94□□□□□ -0.02
VPS37C-203ENST00000536000 GJA8P48165 433 aa14.94□□□□□ -0.02
VPS37C-203ENST00000536000 CACNB2Q08289 660 aaPredicted RBP14.94□□□□□ -0.02
VPS37C-203ENST00000536000 IFIT1BQ5T764 474 aaKnown RBP14.94□□□□□ -0.02
VPS37C-203ENST00000536000 BTNL9Q6UXG8 535 aa14.94□□□□□ -0.02
VPS37C-203ENST00000536000 RASGRP2Q7LDG7 609 aa14.94□□□□□ -0.02
VPS37C-203ENST00000536000 ENAHQ8N8S7 591 aaPredicted RBP14.94□□□□□ -0.02
VPS37C-203ENST00000536000 CHST13Q8NET6 341 aa14.94□□□□□ -0.02
VPS37C-203ENST00000536000 DDX11Q96FC9 970 aa14.94□□□□□ -0.02
VPS37C-203ENST00000536000 FBXO40Q9UH90 709 aa14.94□□□□□ -0.02
VPS37C-203ENST00000536000 COL11A1P12107 1806 aaPredicted RBP14.94□□□□□ -0.02
VPS37C-203ENST00000536000 IFIT3O14879 490 aaKnown RBP14.93□□□□□ -0.02
VPS37C-203ENST00000536000 PRKAR2AP13861 404 aaKnown RBP14.93□□□□□ -0.02
VPS37C-203ENST00000536000 CAPN2P17655 700 aa14.93□□□□□ -0.02
VPS37C-203ENST00000536000 SNAP25P60880 206 aa14.93□□□□□ -0.02
VPS37C-203ENST00000536000 ZNF543Q08ER8 600 aa14.93□□□□□ -0.02
VPS37C-203ENST00000536000 SART3Q15020 963 aaKnown RBP14.93□□□□□ -0.02
VPS37C-203ENST00000536000 NECTIN1Q15223 517 aa14.93□□□□□ -0.02
VPS37C-203ENST00000536000 GPATCH4Q5T3I0 446 aaKnown RBP14.93□□□□□ -0.02
VPS37C-203ENST00000536000 SYDE2Q5VT97 1194 aa14.93□□□□□ -0.02
VPS37C-203ENST00000536000 CCDC174Q6PII3 467 aa14.93□□□□□ -0.02
VPS37C-203ENST00000536000 U2AF1L4Q8WU68 220 aaKnown RBP14.93□□□□□ -0.02
VPS37C-203ENST00000536000 AGBL1Q96MI9 1066 aa14.93□□□□□ -0.02
VPS37C-203ENST00000536000 DEFB118Q96PH6 123 aa14.93□□□□□ -0.02
VPS37C-203ENST00000536000 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.93□□□□□ -0.021e-7■■■■■ 43.3
VPS37C-203ENST00000536000 FLRT1Q9NZU1 646 aa14.93□□□□□ -0.02
VPS37C-203ENST00000536000 TAF6LQ9Y6J9 622 aa14.93□□□□□ -0.02
VPS37C-203ENST00000536000 LAMA4Q16363 1823 aa14.92□□□□□ -0.02
VPS37C-203ENST00000536000 SLC27A2O14975 620 aa14.92□□□□□ -0.02
VPS37C-203ENST00000536000 PGK2P07205 417 aa14.92□□□□□ -0.02
VPS37C-203ENST00000536000 SNHG28P0DPA3 235 aa14.92□□□□□ -0.02
VPS37C-203ENST00000536000 ALAS1P13196 640 aa14.92□□□□□ -0.02
VPS37C-203ENST00000536000 SEC23AQ15436 765 aa14.92□□□□□ -0.02
VPS37C-203ENST00000536000 TKFCQ3LXA3 575 aa14.92□□□□□ -0.02
VPS37C-203ENST00000536000 MAP3K21Q5TCX8 1036 aa14.92□□□□□ -0.02
VPS37C-203ENST00000536000 RNF20Q5VTR2 975 aa14.92□□□□□ -0.02
VPS37C-203ENST00000536000 CREB3L3Q68CJ9 461 aa14.92□□□□□ -0.02
VPS37C-203ENST00000536000 STOX1Q6ZVD7 989 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms