RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 PPP4CP60510 307 aa13.18□□□□□ -0.3
VAMP1-204ENST00000535180 TTLL4Q14679 1199 aa13.18□□□□□ -0.3
VAMP1-204ENST00000535180 ERMP1Q7Z2K6 904 aa13.18□□□□□ -0.3
VAMP1-204ENST00000535180 MSL3Q8N5Y2 521 aaKnown RBP13.18□□□□□ -0.3
VAMP1-204ENST00000535180 SPATA5Q8NB90 893 aa13.18□□□□□ -0.3
VAMP1-204ENST00000535180 SLC43A3Q8NBI5 491 aa13.18□□□□□ -0.3
VAMP1-204ENST00000535180 SPC25Q9HBM1 224 aa13.18□□□□□ -0.3
VAMP1-204ENST00000535180 HMG20BQ9P0W2 317 aa13.18□□□□□ -0.3
VAMP1-204ENST00000535180 KMT2EQ8IZD2 1858 aa13.18□□□□□ -0.3
VAMP1-204ENST00000535180 RIF1Q5UIP0 2472 aaKnown RBP13.17□□□□□ -0.3
VAMP1-204ENST00000535180 DCHS1Q96JQ0 3298 aa13.17□□□□□ -0.3
VAMP1-204ENST00000535180 PFKMP08237 780 aa13.17□□□□□ -0.3
VAMP1-204ENST00000535180 KCNA5P22460 613 aa13.17□□□□□ -0.3
VAMP1-204ENST00000535180 GJA9P57773 515 aa13.17□□□□□ -0.3
VAMP1-204ENST00000535180 KCTD2Q14681 263 aa13.17□□□□□ -0.3
VAMP1-204ENST00000535180 ABCB5Q2M3G0 1257 aa13.17□□□□□ -0.3
VAMP1-204ENST00000535180 PUS10Q3MIT2 529 aaKnown RBP13.17□□□□□ -0.3
VAMP1-204ENST00000535180 CERKLQ49MI3 558 aaPredicted RBP13.17□□□□□ -0.3
VAMP1-204ENST00000535180 GNASQ5JWF2 1037 aa13.17□□□□□ -0.3
VAMP1-204ENST00000535180 TET1Q8NFU7 2136 aa13.17□□□□□ -0.3
VAMP1-204ENST00000535180 PHOSPHO2Q8TCD6 241 aa13.17□□□□□ -0.3
VAMP1-204ENST00000535180 XAGE2Q96GT9 111 aa13.17□□□□□ -0.3
VAMP1-204ENST00000535180 SLC9A7Q96T83 725 aa13.17□□□□□ -0.3
VAMP1-204ENST00000535180 PRRX2Q99811 253 aa13.17□□□□□ -0.3
VAMP1-204ENST00000535180 UPF3AQ9H1J1 476 aaKnown RBP13.17□□□□□ -0.3
VAMP1-204ENST00000535180 SAP30BPQ9UHR5 308 aaKnown RBP13.17□□□□□ -0.3
VAMP1-204ENST00000535180 MYH8P13535 1937 aa13.17□□□□□ -0.3
VAMP1-204ENST00000535180 PLXNA3P51805 1871 aa13.16□□□□□ -0.3
VAMP1-204ENST00000535180 ZNF536O15090 1300 aa13.16□□□□□ -0.3
VAMP1-204ENST00000535180 FAM186AA6NE01 2351 aa13.16□□□□□ -0.3
VAMP1-204ENST00000535180 KIF28PB7ZC32 967 aa13.16□□□□□ -0.3
VAMP1-204ENST00000535180 SNAI1O95863 264 aaPredicted RBP13.16□□□□□ -0.3
VAMP1-204ENST00000535180 MVPQ14764 893 aaKnown RBP13.16□□□□□ -0.3
VAMP1-204ENST00000535180 PI16Q6UXB8 463 aa13.16□□□□□ -0.3
VAMP1-204ENST00000535180 SCLYQ96I15 445 aa13.16□□□□□ -0.3
VAMP1-204ENST00000535180 AGBL1Q96MI9 1066 aa13.16□□□□□ -0.3
VAMP1-204ENST00000535180 CABP5Q9NP86 173 aa13.16□□□□□ -0.3
VAMP1-204ENST00000535180 A0A1B0GUL7 405 aa13.15□□□□□ -0.3
VAMP1-204ENST00000535180 ADCY6O43306 1168 aa13.15□□□□□ -0.3
VAMP1-204ENST00000535180 GUCY1A2P33402 732 aa13.15□□□□□ -0.3
VAMP1-204ENST00000535180 IER5LQ5T953 404 aa13.15□□□□□ -0.3
VAMP1-204ENST00000535180 MAMDC4Q6UXC1 1216 aa13.15□□□□□ -0.3
VAMP1-204ENST00000535180 ATG4CQ96DT6 458 aa13.15□□□□□ -0.3
VAMP1-204ENST00000535180 SEZ6LQ9BYH1 1024 aa13.15□□□□□ -0.3
VAMP1-204ENST00000535180 EHD4Q9H223 541 aa13.15□□□□□ -0.3
VAMP1-204ENST00000535180 LRP2BPQ9P2M1 347 aa13.15□□□□□ -0.3
VAMP1-204ENST00000535180 SERPINB13Q9UIV8 391 aa13.15□□□□□ -0.3
VAMP1-204ENST00000535180 ZHX1Q9UKY1 873 aaPredicted RBP13.15□□□□□ -0.3
VAMP1-204ENST00000535180 TRIP12Q14669 1992 aaPredicted RBP13.14□□□□□ -0.31
VAMP1-204ENST00000535180 A0A1W2PRG0 241 aa13.14□□□□□ -0.31
VAMP1-204ENST00000535180 C19orf67A6NJJ6 358 aa13.14□□□□□ -0.31
VAMP1-204ENST00000535180 CTAGE5O15320 804 aa13.14□□□□□ -0.31
VAMP1-204ENST00000535180 FLOT1O75955 427 aa13.14□□□□□ -0.31
VAMP1-204ENST00000535180 ACTN1P12814 892 aa13.14□□□□□ -0.31
VAMP1-204ENST00000535180 NKX3-2P78367 333 aa13.14□□□□□ -0.31
VAMP1-204ENST00000535180 TCF15Q12870 199 aa13.14□□□□□ -0.31
VAMP1-204ENST00000535180 TMEM132BQ14DG7 1078 aa13.14□□□□□ -0.31
VAMP1-204ENST00000535180 NAA16Q6N069 864 aaPredicted RBP13.14□□□□□ -0.31
VAMP1-204ENST00000535180 SPRED2Q7Z698 418 aa13.14□□□□□ -0.31
VAMP1-204ENST00000535180 RIOX2Q8IUF8 465 aa13.14□□□□□ -0.31
VAMP1-204ENST00000535180 HERC6Q8IVU3 1022 aa13.14□□□□□ -0.31
VAMP1-204ENST00000535180 GDPD5Q8WTR4 605 aa13.14□□□□□ -0.31
VAMP1-204ENST00000535180 PRKAG3Q9UGI9 489 aa13.14□□□□□ -0.31
VAMP1-204ENST00000535180 TANC1Q9C0D5 1861 aa13.13□□□□□ -0.31
VAMP1-204ENST00000535180 B4GALT4O60513 344 aa13.13□□□□□ -0.31
VAMP1-204ENST00000535180 CABYRO75952 493 aa13.13□□□□□ -0.31
VAMP1-204ENST00000535180 ZP2Q05996 745 aa13.13□□□□□ -0.31
VAMP1-204ENST00000535180 ITGA7Q13683 1181 aa13.13□□□□□ -0.31
VAMP1-204ENST00000535180 SEPT2Q15019 361 aa13.13□□□□□ -0.31
VAMP1-204ENST00000535180 BMP8AQ7Z5Y6 402 aa13.13□□□□□ -0.31
VAMP1-204ENST00000535180 ADGRA1Q86SQ6 560 aa13.13□□□□□ -0.31
VAMP1-204ENST00000535180 NEK9Q8TD19 979 aa13.13□□□□□ -0.31
VAMP1-204ENST00000535180 UPF3BQ9BZI7 483 aaKnown RBP13.13□□□□□ -0.31
VAMP1-204ENST00000535180 TRPV6Q9H1D0 765 aa13.13□□□□□ -0.31
VAMP1-204ENST00000535180 ADAMTS5Q9UNA0 930 aa13.13□□□□□ -0.31
VAMP1-204ENST00000535180 AKAP2Q9Y2D5 859 aa13.13□□□□□ -0.31
VAMP1-204ENST00000535180 CACNA1GO43497 2377 aa13.13□□□□□ -0.31
VAMP1-204ENST00000535180 MYO15AQ9UKN7 3530 aa13.12□□□□□ -0.31
VAMP1-204ENST00000535180 ARID4AP29374 1257 aaPredicted RBP13.12□□□□□ -0.31
VAMP1-204ENST00000535180 ACVR2BQ13705 512 aa13.12□□□□□ -0.31
VAMP1-204ENST00000535180 PKN1Q16512 942 aa13.12□□□□□ -0.31
VAMP1-204ENST00000535180 CCDC144BQ3MJ40 725 aa13.12□□□□□ -0.31
VAMP1-204ENST00000535180 KIAA1755Q5JYT7 1200 aa13.12□□□□□ -0.31
VAMP1-204ENST00000535180 DEFB128Q7Z7B8 93 aa13.12□□□□□ -0.31
VAMP1-204ENST00000535180 COPRSQ9NQ92 184 aa13.12□□□□□ -0.31
VAMP1-204ENST00000535180 PA2G4Q9UQ80 394 aaKnown RBP13.12□□□□□ -0.31
VAMP1-204ENST00000535180 NAV1Q8NEY1 1877 aa13.12□□□□□ -0.31
VAMP1-204ENST00000535180 GRIN2DO15399 1336 aa13.12□□□□□ -0.31
VAMP1-204ENST00000535180 SHMT1P34896 483 aa13.11□□□□□ -0.31
VAMP1-204ENST00000535180 CXCL17Q6UXB2 119 aa13.11□□□□□ -0.31
VAMP1-204ENST00000535180 ADHFE1Q8IWW8 467 aa13.11□□□□□ -0.31
VAMP1-204ENST00000535180 ABHD16BQ9H3Z7 469 aa13.11□□□□□ -0.31
VAMP1-204ENST00000535180 SUGCTQ9HAC7 445 aa13.11□□□□□ -0.31
VAMP1-204ENST00000535180 FAM50BQ9Y247 325 aa13.11□□□□□ -0.31
VAMP1-204ENST00000535180 KMT2BQ9UMN6 2715 aaPredicted RBP13.11□□□□□ -0.31
VAMP1-204ENST00000535180 IRS1P35568 1242 aa13.1□□□□□ -0.31
VAMP1-204ENST00000535180 COPB2P35606 906 aa13.1□□□□□ -0.31
VAMP1-204ENST00000535180 STAT3P40763 770 aa13.1□□□□□ -0.31
VAMP1-204ENST00000535180 MCAMP43121 646 aa13.1□□□□□ -0.31
VAMP1-204ENST00000535180 BEX3Q00994 111 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms